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Simon A. Forbes

dblp:92/9421 · DBLP profile ↗
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1ranked-venue papers
0as first author
0since 2021 · last 2007
—ORCID · none

Domains — the database's venue-derived domains; a paper can count in several

Applied, interdisciplinary, general and emerging computing · 1

Expertise — from the expertise taxonomy: the topics of the expert's papers under the CCF categories. A weight counts papers with recency: 1 for a paper about the topic, 0.3 when the topic is its context, halved every five years.

Interdisciplinary, comprehensive, and emerging computing
1 paper
Bioinformatics and computational biology · 100%

Topics — the 2 heaviest of 2, each with the papers that count most for it

TopicWeightPapersLastEvidence papers
Bioinformatics and computational biology
cancer genomics		 0.112007
AutoCSA, an algorithm for high throughput DNA sequence variant detection in cancer genomes · Bioinform. 2007
Bioinformatics and computational biology › cancer genomics › somatic mutation analysis
somatic variant detection		 0.112007
AutoCSA, an algorithm for high throughput DNA sequence variant detection in cancer genomes · Bioinform. 2007

Methods — techniques the papers use, named apart from their topics

mutation detection algorithm · 0.1
YearPublicationVenuePosition
2007 AutoCSA, an algorithm for high throughput DNA sequence variant detection in cancer genomes
abstract
UNLABELLED: The undertaking of large-scale DNA sequencing screens for somatic variants in human cancers requires accurate and rapid processing of traces for variants. Due to their often aneuploid nature and admixed normal tissue, heterozygous variants found in primary cancers are often subtle and difficult to detect. To address these issues, we have developed a mutation detection algorithm, AutoCSA, specifically optimized for the high throughput screening of cancer samples. AVAILABILITY: http://www.sanger.ac.uk/genetics/CGP/Software/AutoCSA.
Ed Dicks, Jon W. Teague, Philip Stephens, Keiran Raine, Andy Yates, C. Mattocks, P. Tarpey, Adam P. Butler, Andrew Menzies, Andrew M. Jenkinson, Helen Davies, Sarah Edkins, Simon A. Forbes, Kristian A. Gray, Christopher Greenman, Rebecca Shepherd, Michael R. Stratton, P. Andrew Futreal, Richard Wooster
 Bioinform.14