Jaakko Hollmén

dblp:h/JaakkoHollmen · DBLP profile ↗
← Back
52ranked-venue papers
4as first author
8since 2021 · last 2024
0000-0002-1912-712XORCID · verified

Domains — the database's venue-derived domains; a paper can count in several

Artificial intelligence and machine learning · 44 · 3 first-author · 8 since 2021Applied, interdisciplinary, general and emerging computing · 20 · 1 first-author · 5 since 2021Databases, data management, data science and information retrieval · 15 · 2 first-author · 3 since 2021Human-computer interaction and ubiquitous computing · 5 · 2 since 2021Graphics, computer vision, multimedia, augmented reality and games · 1
YearPublicationVenuePosition
2024 Policy Control with Delayed, Aggregate, and Anonymous Feedback
Guilherme Dinis Junior, Sindri Magnússon, Jaakko Hollmén
ECML/PKDD (6)3
2023 COVID-19 detection from thermal image and tabular medical data utilizing multi-modal machine learning
abstract
COVID-19 is a viral infectious disease that has created a global pandemic, resulting in millions of deaths and disrupting the world order. Different machine learning and deep learning approaches were considered to detect it utilizing different medical data. Thermal imaging is a promising option for detecting COVID-19 as it is low-cost, non-invasive, and can be maintained remotely. This work explores the COVID-19 detection issue using the thermal image and associated tabular medical data obtained from a publicly available dataset. We incorporate a multi-modal machine learning approach where we investigate the different combinations of medical and data type modalities to get an improved result. We use different machine learning and deep learning methods, namely random forests, Extreme Gradient Boosting (XGBoost), Multilayer Perceptron (MLP), and Convolutional Neural Network (CNN). Overall multi-modal results outperform any single modalities, and it is observed that the thermal image is a crucial factor in achieving it. X G Boost provided the best result with the area under the receiver operating characteristic curve (AUROC) score of 0.91 and the area under the precision-recall curve (AUPRC) score of 0.81. We also report the average of leave-one-positive-instance-out cross- validation evaluation scores. This average score is consistent with the test evaluation score for random forests and XGBoost methods. Our results suggest that utilizing thermal image with associated tabular medical data could be a viable option to detect COVID-19, and it should be explored further to create and test a real-time, secure, private, and remote COVID-19 detection application in the future.
Mahbub Ul Alam 0001, Jaakko Hollmén, Rahim Rahmani
CBMS2
2023 Explaining Black Box Reinforcement Learning Agents Through Counterfactual Policies
Maria Movin, Guilherme Dinis Junior, Jaakko Hollmén, Panagiotis Papapetrou
IDA3
2022 FLICU: A Federated Learning Workflow for Intensive Care Unit Mortality Prediction
abstract
Although Machine Learning can be seen as a promising tool to improve clinical decision-making, it remains limited by access to healthcare data. Healthcare data is sensitive, requiring strict privacy practices, and typically stored in data silos, making traditional Machine Learning challenging. Federated Learning can counteract those limitations by training Machine Learning models over data silos while keeping the sensitive data localized. This study proposes a Federated Learning workflow for Intensive Care Unit mortality prediction. Hereby, the applicability of Federated Learning as an alternative to Centralized Machine Learning and Local Machine Learning is investigated by introducing Federated Learning to the binary classification problem of predicting Intensive Care Unit mortality. We extract multivariate time series data from the MIMIC-III database (lab values and vital signs), and benchmark the predictive performance of four deep sequential classifiers (FRNN, LSTM, GRU, and 1DCNN) varying the patient history window lengths (8h, 16h, 24h, and 48h) and the number of Federated Learning clients (2, 4, and 8). The experiments demonstrate that both Centralized Machine Learning and Federated Learning are comparable in terms of AUPRC and F1-score. Furthermore, the federated approach shows superior performance over Local Machine Learning. Thus, Federated Learning can be seen as a valid and privacy-preserving alternative to Centralized Machine Learning for classifying Intensive Care Unit mortality when the sharing of sensitive patient data between hospitals is not possible.
Lena Mondrejevski, Ioanna Miliou, Annaclaudia Montanino, David Pitts, Jaakko Hollmén, Panagiotis Papapetrou
CBMS5
2022 Policy Evaluation with Delayed, Aggregated Anonymous Feedback
Guilherme Dinis Junior, Sindri Magnússon, Jaakko Hollmén
DS3
2022 Semi-parametric Approach to Random Forests for High-Dimensional Bayesian Optimisation
Vladimir Kuzmanovski, Jaakko Hollmén
DS2
2022 Principal Component Analysis Visualizations in State Discovery by Animating Exploration Results
abstract
Visualization is a key point in data exploration. In this paper we have emphasis in adding dynamic features by constructing exploration animations. We use Principal Component Analysis (PCA) in dimensionality reduction and K-means clustering algorithm in defining states. In predicting state transitions, we use Hidden Markov Model (HMM). Analyzed physical data is got from self-healing autonomous data centers. Our research methodology is to animate state transitions for data exploration in modern computerized environment. We use Jupyter tool and Python 3 programming language in our experimental realization. As results we get PCA animations for exploration purposes. Our approach is based on state discovery, where it is possible to find some physical interpretations for the defined states and state transitions. State structure and behaviour depend strongly on analyzed data.
Miki Sirola, Olli-Pekka Rinta-Koski, Le Ngu Nguyen, Jaakko Hollmén
SMARTCOMP4
2021 Composite Surrogate for Likelihood-Free Bayesian Optimisation in High-Dimensional Settings of Activity-Based Transportation Models
Vladimir Kuzmanovski, Jaakko Hollmén
IDA2
2020 A Clustering Framework for Patient Phenotyping with Application to Adverse Drug Events
abstract
We present a clustering framework for identifying patient groups with Adverse Drug Reactions from Electronic Health Records (EHRs). The increased adoption of EHRs has brought changes in the way drug safety surveillance is carried out and plays an important role in effective drug regulation. Unsupervised machine learning methods using EHRs as their input can identify patients that share common meaningful information, without the need for expert input. In this work, we propose a generalized framework that exploits the strengths of different clustering algorithms and via clustering aggregation identifies consensus patient cluster profiles. Moreover, the inherent hierarchical structure of diagnoses and medication codes is exploited. We assess the statistical significance of the produced clusterings by applying a randomization technique that keeps the data distribution margins fixed, as we are interested in evaluating information that is not conveyed by the marginal distributions. The experimental findings suggest that the framework produces medically meaningful patient groups with regard to adverse drug events by investigating two use-cases, i.e., aplastic anaemia and drug-induced skin eruption.
Maria Bampa, Panagiotis Papapetrou, Jaakko Hollmén
CBMS3
2020 Mitigating Discrimination in Clinical Machine Learning Decision Support Using Algorithmic Processing Techniques
Emma Briggs, Jaakko Hollmén
DS2
2019 Temporal Analysis of Adverse Weather Conditions Affecting Wheat Production in Finland
Vladimir Kuzmanovski, Mika Sulkava, Taru Palosuo, Jaakko Hollmén
DS4
2018 Gaussian process classification for prediction of in-hospital mortality among preterm infants
Olli-Pekka Rinta-Koski, Simo Särkkä, Jaakko Hollmén, Markus Leskinen, Sture Andersson
Neurocomputing3
2017 Prediction of preterm infant mortality with Gaussian process classification
Olli-Pekka Rinta-Koski, Simo Särkkä, Jaakko Hollmén, Markus Leskinen, Sture Andersson
ESANN3
2017 BLPA: Bayesian learn-predict-adjust method for online detection of recurrent changepoints
abstract
Online changepoint detection is an important task for machine learning in changing environments, as it signals when the learning model needs to be updated. Presence of noise that can be mistaken for real changes makes it difficult to develop an effective approach that would have a low false alarm rate and being able to detect all the changes with a minimal delay. In this paper we study how performance of popular Bayesian online detectors can be improved in case of recurrent changes. Modelling recurrence allows us to anticipate future changepoints and predict their locations in time. We propose an approach for inducing and integrating recurrence information in the streaming settings, and demonstrate its effectiveness on synthetic and realworld human activity datasets.
Alexandr V. Maslov, Mykola Pechenizkiy, Yulong Pei, Indre Zliobaite, Alexander Shklyaev, Tommi Kärkkäinen, Jaakko Hollmén
IJCNN7
2017 Multi-label methods for prediction with sequential data
Jesse Read, Luca Martino, Jaakko Hollmén
Pattern Recognit.3
2016 Resource Frequency Prediction in Healthcare: Machine Learning Approach
abstract
Determining the minimal amount of resources needed to ensure minimal number of bottlenecks in the patient flow not only promotes patient satisfaction but also provides financial benefits to hospitals. The increase of data gathering by healthcare facilities in the last years have brought new opportunities to apply machine learning techniques to tackle this problem. This work makes use of data gathered from the Oulu University Hospital in Finland between 2011 and 2014 to study the effectiveness of machine learning techniques to predict resources usage. This work investigates the problem of resource frequency prediction and compares the performance of Nearest Neighbours and Random Forest. The application of data clustering as a preprocessing step is also explored as a way to improve the prediction accuracy of resources whose behavior change over time. The results indicate that 1) highly frequented resources can be predicted with higher accuracy than the lowly frequented resources, 2) the Random Forest have similar performance to the Nearest Neighbours although Random Forest performs better, 3) clustering improves the performance of the Nearest Neighbours but not of Random Forest, and 4) if averages are used to determine the resource frequency then cluster averages yields higher accuracy than all data averages.
Daniel Vieira, Jaakko Hollmén
CBMS2
2016 Labeling sensing data for mobility modeling
Jesse Read, Indre Zliobaite, Jaakko Hollmén
Inf. Syst.3
2016 Explaining mixture models through semantic pattern mining and banded matrix visualization
Prem Raj Adhikari, Anze Vavpetic, Jan Kralj, Nada Lavrac, Jaakko Hollmén
Mach. Learn.5
2015 Resolution Transfer in Cancer Classification Based on Amplification Patterns
Prem Raj Adhikari, Jaakko Hollmén
Discovery Science2
2015 Fast progressive training of mixture models for model selection
Prem Raj Adhikari, Jaakko Hollmén
J. Intell. Inf. Syst.2
2015 Optimizing regression models for data streams with missing values
Indre Zliobaite, Jaakko Hollmén
Mach. Learn.2
2014 Explaining Mixture Models through Semantic Pattern Mining and Banded Matrix Visualization
Prem Raj Adhikari, Anze Vavpetic, Jan Kralj, Nada Lavrac, Jaakko Hollmén
Discovery Science5
2014 Multi-Step Ahead Forecasting of Road Condition Using Least Squares Support Vector Regression
Konsta Sirvio, Jaakko Hollmén
ESANN2
2014 A Deep Interpretation of Classifier Chains
Jesse Read, Jaakko Hollmén
IDA2
2013 Challenges in predicting community periodontal index from hospital dental care records
abstract
Many studies have been performed in predicting periodontal diseases based on genetic information, dental images or patients habits but few have yet used dental visits records. This paper proposes a methodology based on Random Forest to classify the periodontal disease condition of patients and a way to assess the most important features that lead to a successful classification. We investigate three problematic issues found in dental care records: noise, class imbalance and concept drift and propose solutions to overcome them by respectively detecting and removing noise, under-sampling and only considering recent data. Experiments performed on records from Finnish public hospitals of two cities had good classification results and feature importance was able to detect dentists with poor performance with respect to diagnosis and treatment application.
Daniel Vieira, Jari Linden, Jaakko Hollmén, Jorma Suni
CBMS3
2013 Mixture Models from Multiresolution 0-1 Data
Prem Raj Adhikari, Jaakko Hollmén
Discovery Science2
2013 Fault Tolerant Regression for Sensor Data
Indre Zliobaite, Jaakko Hollmén
ECML/PKDD (1)2
2012 Fast Progressive Training of Mixture Models for Model Selection
Prem Raj Adhikari, Jaakko Hollmén
Discovery Science2
2012 Three-way analysis of structural health monitoring data
Miguel Ángel Prada, Janne Toivola, Jyrki Kullaa, Jaakko Hollmén
Neurocomputing4
2012 Hum-a-song: A Subsequence Matching with Gaps-Range-Tolerances Query-By-Humming System
abstract
We present "Hum-a-song", a system built for music retrieval, and particularly for the Query-By-Humming (QBH) application. According to QBH, the user is able to hum a part of a song that she recalls and would like to learn what this song is, or find other songs similar to it in a large music repository. We present a simple yet efficient approach that maps the problem to time series subsequence matching. The query and the database songs are represented as 2-dimensional time series conveying information about the pitch and the duration of the notes. Then, since the query is a short sequence and we want to find its best match that may start and end anywhere in the database, subsequence matching methods are suitable for this task. In this demo, we present a system that employs and exposes to the user a variety of state-of-the-art dynamic programming methods, including a newly proposed efficient method named SMBGT that is robust to noise and considers all intrinsic problems in QBH; it allows variable tolerance levels when matching elements, where tolerances are defined as functions of the compared sequences, gaps in both the query and target sequences, and bounds the matching length and (optionally) the minimum number of matched elements. Our system is intended to become open source, which is to the best of our knowledge the first non-commercial effort trying to solve QBH with a variety of methods, and that also approaches the problem from the time series perspective.
Alexios Kotsifakos, Panagiotis Papapetrou, Jaakko Hollmén, Dimitrios Gunopulos, Vassilis Athitsos, George Kollios
Proc. VLDB Endow.3
2011 Forecasting Road Condition after Maintenance Works by Linear Methods and Radial Basis Function Networks
Konsta Sirvio, Jaakko Hollmén
ICANN (2)2
2011 Comparative Analysis of Power Consumption in University Buildings Using envSOM
Serafín Alonso Castro, Manuel Domínguez 0002, Miguel Ángel Prada, Mika Sulkava, Jaakko Hollmén
IDA5
2011 Logistic Fitting Method for Detecting Onset and Cessation of Tree Stem Radius Increase
Mark J. Brewer, Mika Sulkava, Harri Mäkinen, Mikko Korpela, Pekka Nöjd, Jaakko Hollmén
IDEAL6
2011 ARTEMIS: Assessing the Similarity of Event-Interval Sequences
Orestis Kostakis, Panagiotis Papapetrou, Jaakko Hollmén
ECML/PKDD (2)3
2011 A Subsequence Matching with Gaps-Range-Tolerances Framework: A Query-By-Humming Application
Alexios Kotsifakos, Panagiotis Papapetrou, Jaakko Hollmén, Dimitrios Gunopulos
Proc. VLDB Endow.3
2010 Novelty Detection in Projected Spaces for Structural Health Monitoring
Janne Toivola, Miguel Ángel Prada, Jaakko Hollmén
IDA3
2010 Automatic detection of onset and cessation of tree stem radius increase using dendrometer data
Mikko Korpela, Harri Mäkinen, Pekka Nöjd, Jaakko Hollmén, Mika Sulkava
Neurocomputing4
2009 Feature Extraction and Selection from Vibration Measurements for Structural Health Monitoring
Janne Toivola, Jaakko Hollmén
IDA2
2008 Smoothed Prediction of the Onset of Tree Stem Radius Increase Based on Temperature Patterns
Mikko Korpela, Harri Mäkinen, Mika Sulkava, Pekka Nöjd, Jaakko Hollmén
Discovery Science5
2008 Selection of important input variables for RBF network using partial derivatives
Jarkko Tikka, Jaakko Hollmén
ESANN2
2008 Sequential input selection algorithm for long-term prediction of time series
Jarkko Tikka, Jaakko Hollmén
Neurocomputing2
2007 Model Selection and Estimation Via Subjective User Preferences
Jaakko Hollmén
Discovery Science1
2007 Compact and Understandable Descriptions of Mixtures of Bernoulli Distributions
Jaakko Hollmén, Jarkko Tikka
IDA1
2006 Analysis of Linux Evolution Using Aligned Source Code Segments
Antti Rasinen, Jaakko Hollmén, Heikki Mannila
Discovery Science2
2006 Analysis of Fast Input Selection: Application in Time Series Prediction
Jarkko Tikka, Amaury Lendasse, Jaakko Hollmén
ICANN (2)3
2005 Combining Measurement Quality into Monitoring Trends in Foliar Nutrient Concentrations
Mika Sulkava, Pasi Rautio, Jaakko Hollmén
ICANN (2)3
2003 Mixture Models and Frequent Sets: Combining Global and Local Methods for 0-1 Data
abstract
We study the interaction between global and local techniques in data mining. Specifically, we study the collections of frequent sets in clusters produced by a probabilistic clustering using mixtures of Bernoulli models. That is, we first analyze 0–1 datasets by a global technique (probabilistic clustering using the EM algorithm) and then do a local analysis (discovery of frequent sets) in each of the clusters. The results indicate that the use of clustering as a preliminary phase in finding frequent sets produces clusters that have significantly different collections of frequent sets. We also test the significance of the differences in the frequent set collections in the different clusters by obtaining estimates of the underlying joint density. To get from the local patterns in each cluster back to distributions, we use the maximum entropy technique [17] to obtain a local model for each cluster, and then combine these local models to get a mixture model. We obtain clear improvements to the approximation quality against the use of either the mixture model or the maximum entropy model.
Jaakko Hollmén, Jouni K. Seppänen, Heikki Mannila
SDM1
2002 Image Analysis for Detecting Faulty Spots from Microarray Images
Salla Ruosaari, Jaakko Hollmén
Discovery Science2
2000 Quantization of Continuous Input Variables for Binary Classification
Michal Skubacz, Jaakko Hollmén
IDEAL2
1998 Fraud detection in communication networks using neural and probabilistic methods
abstract
Fraud detection refers to the attempt to detect illegitimate usage of a communication network. Three methods to detect fraud are presented. Firstly, a feed-forward neural network based on supervised learning is used to learn a discriminative function to classify subscribers using summary statistics. Secondly, a Gaussian mixture model is used to model the probability density of subscribers' past behavior so that the probability of current behavior can be calculated to detect any abnormalities from the past behavior. Lastly, Bayesian networks are used to describe the statistics of a particular user and the statistics of different fraud scenarios. The Bayesian networks can be used to infer the probability of fraud given the subscribers' behavior. The data features are derived from toll tickets. The experiments show that the methods detect over 85% of the fraudsters in our testing set without causing false alarms.
Michiaki Taniguchi, Michael Haft, Jaakko Hollmén, Volker Tresp
ICASSP3
1998 Call-Based Fraud Detection in Mobile Communication Networks Using a Hierarchical Regime-Switching Model
Jaakko Hollmén, Volker Tresp
NIPS1
1997 Analysis of Complex Systems Using the Self-Organizing Map
Olli Simula, Esa Alhoniemi, Jaakko Hollmén, Juha Vesanto
ICONIP (2)3