Helen Schneider

dblp:127/5338 · DBLP profile ↗
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3ranked-venue papers in the field
1as first author
3since 2021 · last 2025
0000-0002-0418-1828ORCID · corroborated

Domains — venue-derived; a paper can count in several

Big Data, Cloud & Distributed Data Systems · 2 (1 first)Data Mining & Knowledge Discovery · 1
YearPublicationVenuePosition
2025 First Investigation of Deep Learning for Intraoperative Gauze Segmentation in Minimally Invasive Abdominal Surgery
abstract
Surgical gauze is an essential part of surgical procedures, which is primarily used for controlling bleeding and absorbing bodily fluids. The post-surgical retention of gauze can lead to serious complications in the patient's health and necessitate additional surgery for gauze removal. In the wake of data scarcity, the research on gauze segmentation on the real-world surgical data remains underexplored. In this work, we investigate the use of deep learning methods for gauze segmentation in robotassisted minimally invasive abdominal surgeries, utilizing an inhouse surgical dataset prepared at a university hospital. The training data reflects a realistic surgical setting and extensive diversity in spatial, morphological, and visual attributes of three different gauze categories. We have investigated prevalently used segmentation architectures, including CNN-based, transformer-based, and hybrid architectures, to provide a proof-of-concept for gauze segmentation in a realistic setting. Besides, we investigate the influence of additional sub-optimally annotated, auto-tracked segmentation masks to address the bottleneck of data scarcity and performance optimization. Our results demonstrate the efficacy of real-world data to counter the main challenge reported by prior works - the trade-off between blood presence and gauze detection. The incorporation of auto-track annotations enables performance enhancements, particularly in generic cases. The integration of effective segmentation approaches will benefit robotguided surgical procedures and various downstream applications by providing a precise delineation of foreign objects, enhancing patient safety and surgical outcomes.
Priya Tomar, Maximilian Broß, Philipp Feodorovici, Jan Arensmeyer, Philipp Leifels, Aditya Parikh, Hanno Matthaei, Christian Bauckhage, Helen Schneider, Rafet Sifa
DSAA9
2023 Learning the Dynamics of Concentration Fields in Vascular Stenosis with Deep Hidden Physics Models
abstract
Understanding the dynamics of blood flow is crucial in the context of cardiovascular health and disease. The dynamics of the blood flow can be a significant parameter for the development of decision support systems to enable early detection and accurate diagnosis of coronary artery diseases. Uncovering the underlying dynamics from high-dimensional data generated from experiments is a highly complex problem at the intersection of artificial intelligence and applied mathematics. Deep Hidden Physics Models can be used to learn the underlying dynamics without additional physical knowledge.In this work, the potential of Deep Hidden Physics Models to model the clinically relevant dynamics of blood flow is investigated. The experiments consider the use case of stenosis in two-dimensional spatial space. Based on the learned dynamics, the concentration field can be approximated accurately, indicating that the dynamics are learned correctly. Additionally, we examine the capability of the model to extrapolate the learned dynamics for unknown time intervals.
Rebecca Kador, Helen Schneider, David Biesner, Babette Dellen, Rafet Sifa
IEEE Big Data2
2023 Is one label all you need? Single positive multi-label training in medical image analysis
abstract
Deep Learning is proving its immense potential in medical image processing. However, noisy label data can weaken the generalization ability of the model and cause significant performance degradation. This issue can be more prevalent in multi-label classification tasks, since their annotation is more challenging. With too many labels, human annotators may have difficulties mentioning all possible classes, which leads to an increased number of false negative labels. Single Positive Multi-Label (SPML) training deals with the most severe version of this problem, in which for each sample only one positive label is available. All other labels are not observed, i.e. not confirmed as positive or negative. While SPML has already achieved good results for the multi-label detection of objects, its impact on the extremely pertinent medical imaging use case has not yet been explored. In this work, we therefore investigate the performance of state-of-the-art SPML loss functions in the analysis of chest X-rays, both on the public CheXpert and on an in-house data set of the University Hospital Bonn. In addition, we propose our new SPML loss functions, the Generalized Assume Negative and Implicit Weighting Assume Negative loss, which increase the mean average precision by up to 4.6% compared to the popular binary cross-entropy loss.
Helen Schneider, Priya Priya, David Biesner, Rebecca Kador, Yannik C. Layer, Maike Theis, Sebastian Nowak 0003, Alois M. Sprinkart, Ulrike I. Attenberger, Rafet Sifa
IEEE Big Data1