Jessica Shi 0001

dblp:211/8126 · DBLP profile ↗
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4ranked-venue papers in the field
3as first author
4since 2021 · last 2024
0000-0003-4485-5492ORCID · conflict

Domains — venue-derived; a paper can count in several

Database Systems & Data Management · 4 (3 first)
YearPublicationVenuePosition
2024 Parallel Algorithms for Hierarchical Nucleus Decomposition
abstract
Nucleus decompositions have been shown to be a useful tool for finding dense subgraphs. The coreness value of a clique represents its density based on the number of other cliques it is adjacent to. One useful output of nucleus decomposition is to generate a hierarchy among dense subgraphs at different resolutions. However, existing parallel algorithms for nucleus decomposition do not generate this hierarchy, and only compute the coreness values. This paper presents a scalable parallel algorithm for hierarchy construction, with practical optimizations, such as interleaving the coreness computation with hierarchy construction and using a concurrent union-find data structure in an innovative way to generate the hierarchy. We also introduce a parallel approximation algorithm for nucleus decomposition, which achieves much lower span in theory and better performance in practice. We prove strong theoretical bounds on the work and span (parallel time) of our algorithms. On a 30-core machine with two-way hyper-threading, our parallel hierarchy construction algorithm achieves up to a 58.84x speedup over the state-of-the-art sequential hierarchy construction algorithm by Sariyuce et al. and up to a 30.96x self-relative parallel speedup. On the same machine, our approximation algorithm achieves a 3.3x speedup over our exact algorithm, while generating coreness estimates with a multiplicative error of 1.33x on average.
Jessica Shi 0001, Laxman Dhulipala, Julian Shun
Proc. ACM Manag. Data1
2024 The ParClusterers Benchmark Suite (PCBS): A Fine-Grained Analysis of Scalable Graph Clustering
abstract
We introduce the ParClusterers Benchmark Suite (PCBS)---a collection of highly scalable parallel graph clustering algorithms and benchmarking tools that streamline comparing different graph clustering algorithms and implementations. The benchmark includes clustering algorithms that target a wide range of modern clustering use cases, including community detection, classification, and dense subgraph mining. The benchmark toolkit makes it easy to run and evaluate multiple instances of different clustering algorithms with respect to both the running time and quality. We evaluate the PCBS algorithms empirically and find that they deliver both the state of the art quality and the running time. In terms of the running time, they are on average over 4x faster than the fastest library we compared to. In terms of quality, the correlation clustering algorithm [Shi et al., VLDB'21] optimizing for the LambdaCC objective, which does not have a direct counterpart in other libraries, delivers the highest quality in the majority of datasets that we used.
Shangdi Yu, Jessica Shi 0001, Jamison Meindl, David Eisenstat, Xiaoen Ju, Sasan Tavakkol, Laxman Dhulipala, Jakub Lacki, Vahab S. Mirrokni, Julian Shun
Proc. VLDB Endow.2
2021 Scalable Community Detection via Parallel Correlation Clustering
abstract
Graph clustering and community detection are central problems in modern data mining. The increasing need for analyzing billion-scale data calls for faster and more scalable algorithms for these problems. There are certain trade-offs between the quality and speed of such clustering algorithms. In this paper, we design scalable algorithms that achieve high quality when evaluated based on ground truth. We develop a generalized sequential and shared-memory parallel framework based on the LAMBDACC objective (introduced by Veldt et al.), which encompasses modularity and correlation clustering. Our framework consists of highly-optimized implementations that scale to large data sets of billions of edges and that obtain high-quality clusters compared to ground-truth data, on both unweighted and weighted graphs. Our empirical evaluation shows that this framework improves the state-of-the-art trade-offs between speed and quality of scalable community detection. For example, on a 30-core machine with two-way hyper-threading, our implementations achieve orders of magnitude speedups over other correlation clustering baselines, and up to 28.44× speedups over our own sequential baselines while maintaining or improving quality.
Jessica Shi 0001, Laxman Dhulipala, David Eisenstat, Jakub Lacki, Vahab S. Mirrokni
Proc. VLDB Endow.1
2021 Theoretically and Practically Efficient Parallel Nucleus Decomposition
abstract
This paper studies the nucleus decomposition problem, which has been shown to be useful in finding dense substructures in graphs. We present a novel parallel algorithm that is efficient both in theory and in practice. Our algorithm achieves a work complexity matching the best sequential algorithm while also having low depth (parallel running time), which significantly improves upon the only existing parallel nucleus decomposition algorithm (Sariyüce et al. , PVLDB 2018). The key to the theoretical efficiency of our algorithm is a new lemma that bounds the amount of work done when peeling cliques from the graph, combined with the use of a theoretically-efficient parallel algorithms for clique listing and bucketing. We introduce several new practical optimizations, including a new multi-level hash table structure to store information on cliques space-efficiently and a technique for traversing this structure cache-efficiently. On a 30-core machine with two-way hyper-threading on real-world graphs, we achieve up to a 55x speedup over the state-of-the-art parallel nucleus decomposition algorithm by Sariyüce et al. , and up to a 40x self-relative parallel speedup. We are able to efficiently compute larger nucleus decompositions than prior work on several million-scale graphs for the first time.
Jessica Shi 0001, Laxman Dhulipala, Julian Shun
Proc. VLDB Endow.1