Wei-Wei Tu

dblp:229/4363 · also Weiwei Tu · DBLP profile ↗
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8ranked-venue papers in the field
0as first author
6since 2021 · last 2023
—ORCID · conflict

Domains — venue-derived; a paper can count in several

Data Mining & Knowledge Discovery · 5Information Retrieval & Web Search · 2Database Systems & Data Management · 1
YearPublicationVenuePosition
2023 Automated 3D Pre-Training for Molecular Property Prediction
abstract
Molecular property prediction is an important problem in drug discovery and materials science. As geometric structures have been demonstrated necessary for molecular property prediction,3D information has been combined with various graph learning methods to boost prediction performance. However, obtaining the geometric structure of molecules is not feasible in many real-world applications due to the high computational cost. In this work, we propose a novel 3D pre-training framework (dubbed 3D PGT), which pre-trains a model on 3D molecular graphs, and then fine-tunes it on molecular graphs without 3D structures. Based on fact that bond length, bond angle, and dihedral angle are three basic geometric descriptors corresponding to a complete molecular 3D conformer, we first develop a multi-task generative pre-train framework based on these three attributes. Next, to automatically fuse these three generative tasks, we design a surrogate metric using the total energy to search for weight distribution of the three pretext tasks since total energy corresponding to the quality of 3D conformer. Extensive experiments on 2D molecular graphs are conducted to demonstrate the accuracy, efficiency and generalization ability of the proposed 3D PGT compared to various pre-training baselines.
Huan Zhao 0002, Wei-Wei Tu, Quanming Yao
KDD3
2022 Translation-Based Implicit Annotation Projection for Zero-Shot Cross-Lingual Event Argument Extraction
abstract
Zero-shot cross-lingual event argument extraction (EAE) is a challenging yet practical problem in Information Extraction. Most previous works heavily rely on external structured linguistic features, which are not easily accessible in real-world scenarios. This paper investigates a translation-based method to implicitly project annotations from the source language to the target language. With the use of translation-based parallel corpora, no additional linguistic features are required during training and inference. As a result, the proposed approach is more cost effective than previous works on zero-shot cross-lingual EAE. Moreover, our implicit annotation projection approach introduces less noises and hence is more effective and robust than explicit ones. Experimental results show that our model achieves the best performance, outperforming a number of competitive baselines. The thorough analysis further demonstrates the effectiveness of our model compared to explicit annotation projection approaches.
Chenwei Lou, Changlong Yu, Wei Wang 0138, Huan Zhao 0002, Wei-Wei Tu, Ruifeng Xu 0001
SIGIR6
2021 Search to aggregate neighborhood for graph neural network
abstract
Recent years have witnessed the popularity and success of graph neural networks (GNN) in various scenarios. To obtain data-specific GNN architectures, researchers turn to neural architecture search (NAS), which have made impressive success in discovering effective architectures in convolutional neural networks. However, it is non-trivial to apply NAS approaches to GNN due to challenges in search space design and expensive searching cost of existing NAS methods. In this work, to obtain the data-specific GNN architectures and address the computational challenges facing by NAS approaches, we propose a framework, which tries to Search to Aggregate NEighborhood (SANE), to automatically design data-specific GNN architectures. By designing a novel and expressive search space, we propose a differentiable search algorithm, which is more efficient than previous reinforcement learning based methods. Experimental results on four tasks and seven real-world datasets demonstrate the superiority of SANE compared to existing GNN models and NAS approaches in terms of effectiveness and efficiency.
Huan Zhao 0002, Quanming Yao, Wei-Wei Tu
ICDE3
2021 Task-wise Split Gradient Boosting Trees for Multi-center Diabetes Prediction
abstract
Diabetes prediction is an important data science application in the social healthcare domain. There exist two main challenges in the diabetes prediction task: data heterogeneity since demographic and metabolic data are of different types, data insufficiency since the number of diabetes cases in a single medical center is usually limited. To tackle the above challenges, we employ gradient boosting decision trees (GBDT) to handle data heterogeneity and introduce multi-task learning (MTL) to solve data insufficiency. To this end, Task-wise Split Gradient Boosting Trees (TSGB) is proposed for the multi-center diabetes prediction task. Specifically, we firstly introduce task gain to evaluate each task separately during tree construction, with a theoretical analysis of GBDT's learning objective. Secondly, we reveal a problem when directly applying GBDT in MTL, i.e., the negative task gain problem. Finally, we propose a novel split method for GBDT in MTL based on the task gain statistics, named task-wise split, as an alternative to standard feature-wise split to overcome the mentioned negative task gain problem. Extensive experiments on a large-scale real-world diabetes dataset and a commonly used benchmark dataset demonstrate TSGB achieves superior performance against several state-of-the-art methods. Detailed case studies further support our analysis of negative task gain problems and provide insightful findings. The proposed TSGB method has been deployed as an online diabetes risk assessment software for early diagnosis.
Mingcheng Chen, Zhenghui Wang, Zhiyun Zhao, Weinan Zhang 0001, Xiawei Guo, Jian Shen 0003, Yanru Qu, Jieli Lu, Wei-Wei Tu, Yong Yu 0001, Yufang Bi, Guang Ning
KDD13
2021 Towards Robust Prediction on Tail Labels
abstract
Extreme multi-label learning (XML) works to annotate objects with relevant labels from an extremely large label set. Many previous methods treat labels uniformly such that the learned model tends to perform better on head labels, while the performance is severely deteriorated for tail labels. However, it is often desirable to predict more tail labels in many real-world applications. To alleviate this problem, in this work, we show theoretical and experimental evidence for the inferior performance of representative XML methods on tail labels. Our finding is that the norm of label classifier weights typically follows a long-tailed distribution similar to the label frequency, which results in the over-suppression of tail labels. Base on this new finding, we present two new modules: (1)ReRank works to re-rank the predicted score, which significantly improves the performance on tail labels by eliminating the effect of label-priors; (2)Taug augments tail labels via a decoupled learning scheme, which can yield more balanced classification boundary. We conduct experiments on commonly used XML benchmarks with hundreds of thousands of labels, showing that the proposed methods improve the performance of many state-of-the-art XML models by a considerable margin (6% performance gain with respect to [email protected] on average). Anonymous source code is available at https://github.com/ReRANK-XML/rerank-XML.
Tong Wei 0001, Wei-Wei Tu, Yufeng Li 0008
KDD2
2021 AutoML Meets Time Series Regression Design and Analysis of the AutoSeries Challenge
Zhen Xu 0007, Wei-Wei Tu, Isabelle Guyon
ECML/PKDD (5)2
2020 Network On Network for Tabular Data Classification in Real-world Applications
abstract
Tabular data is the most common data format adopted by our customers ranging from retail, finance to E-commerce, and tabular data classification plays an essential role to their businesses. In this paper, we present Network On Network (NON), a practical tabular data classification model based on deep neural network to provide accurate predictions. Various deep methods have been proposed and promising progress has been made. However, most of them use operations like neural network and factorization machines to fuse the embeddings of different features directly, and linearly combine the outputs of those operations to get the final prediction. As a result, the intra-field information and the non-linear interactions between those operations (e.g. neural network and factorization machines) are ignored. Intra-field information is the information that features inside each field belong to the same field. NON is proposed to take full advantage of intra-field information and non-linear interactions. It consists of three components: field-wise network at the bottom to capture the intra-field information, across field network in the middle to choose suitable operations data-drivenly, and operation fusion network on the top to fuse outputs of the chosen operations deeply. Extensive experiments on six real-world datasets demonstrate NON can outperform the state-of-the-art models significantly. Furthermore, both qualitative and quantitative study of the features in the embedding space show NON can capture intra-field information effectively.
Yuanfei Luo, Wei-Wei Tu, Yuqiang Chen, Wenyuan Dai, Qiang Yang 0001
SIGIR3
2019 AutoCross: Automatic Feature Crossing for Tabular Data in Real-World Applications
abstract
Feature crossing captures interactions among categorical features and is useful to enhance learning from tabular data in real-world businesses. In this paper, we present AutoCross, an automatic feature crossing tool provided by 4Paradigm to its customers, ranging from banks, hospitals, to Internet corporations. By performing beam search in a tree-structured space, AutoCross enables efficient generation of high-order cross features, which is not yet visited by existing works. Additionally, we propose successive mini-batch gradient descent and multi-granularity discretization to further improve efficiency and effectiveness, while ensuring simplicity so that no machine learning expertise or tedious hyper-parameter tuning is required. Furthermore, the algorithms are designed to reduce the computational, transmitting, and storage costs involved in distributed computing. Experimental results on both benchmark and real-world business datasets demonstrate the effectiveness and efficiency of AutoCross. It is shown that AutoCross can significantly enhance the performance of both linear and deep models.
Yuanfei Luo, Mengshuo Wang, Quanming Yao, Wei-Wei Tu, Yuqiang Chen, Wenyuan Dai, Qiang Yang 0001
KDD5