Michael Barnes

dblp:28/2521 · DBLP profile ↗
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2ranked-venue papers in the field
0as first author
2since 2021 · last 2023
—ORCID · conflict

Domains — venue-derived; a paper can count in several

Big Data, Cloud & Distributed Data Systems · 2
YearPublicationVenuePosition
2023 Interpretable and robust hospital readmission predictions from Electronic Health Records
abstract
Rates of Hospital Readmission (HR), defined as unplanned readmission within 30 days of discharge, have been increasing over the years, and impose an economic burden on healthcare services worldwide. Despite recent research into predicting HR, few models provide sufficient discriminative ability. Three main drawbacks can be identified in the published literature: (i) imbalance in the target classes (readmitted or not), (ii) not including demographic and lifestyle predictors, and (iii) lack of interpretability of the models. In this work, we address these three points by evaluating class balancing techniques, performing a feature selection process including demographic and lifestyle features, and adding interpretability through a combination of SHapley Additive exPlanations (SHAP) and Accumulated Local Effects (ALE) post hoc methods. Our best classifier for this binary outcome achieves a UAC of 0.849 using a selection of 1296 features, extracted from patients’ Electronic Health Records (EHRs) and from their sociodemographics profiles. Using SHAP and ALE, we have established the importance of age, the number of long-term conditions, and the duration of the first admission as top predictors. In addition, we show through an ablation study that demographic and lifestyle features provide even better predictive capabilities than other features, suggesting their relevance toward HR.
Hugo Calero-Díaz, Rebeen Ali Hamad, Christian Atallah, John Casement, Dexter Canoy, Nick J. Reynolds, Michael Barnes, Paolo Missier
IEEE Big Data7
2022 Tracking trajectories of multiple long-term conditions using dynamic patient-cluster associations
abstract
Momentum has been growing into research to better understand the dynamics of multiple long-term conditions – multimorbidity (MLTC-M), defined as the co-occurrence of two or more long-term or chronic conditions within an individual. Several research efforts make use of Electronic Health Records (EHR), which represent patients’ medical histories. These range from discovering patterns of multimorbidity, namely by clustering diseases based on their co-occurrence in EHRs, to using EHRs to predict the next disease or other specific outcomes. One problem with the former approach is that it discards important temporal information on the co-occurrence, while the latter requires "big" data volumes that are not always available from routinely collected EHRs, limiting the robustness of the resulting models.In this paper we take an intermediate approach, where initially we use about 143,000 EHRs from UK Biobank to perform time-independent clustering using topic modelling, and Latent Dirichlet Allocation specifically. We then propose a metric to measure how strongly a patient is "attracted" into any given cluster at any point through their medical history. By tracking how such gravitational pull changes over time, we may then be able to narrow the scope for potential interventions and preventative measures to specific clusters, without having to resort to full-fledged predictive modelling.In this preliminary work we show exemplars of these dynamic associations, which suggest that further exploration may lead to actionable insights into patients’ medical trajectories.
Ron Kremer, Syed Mohib Raza, Fabiola Eto, John Casement, Christian Atallah, Sarah Finer, Dennis Lendrem, Michael Barnes, Nick J. Reynolds, Paolo Missier
IEEE Big Data8