Abstract Structural magnetic resonance imaging (MRI) provides useful information for biomarker exploration and intelligent classification of Alzheimer's disease (AD). Machine learning and deep learning methods have been used in feature extraction and computer‐aided diagnosis or prediction of AD. In this research, a new deep learning model is developed to detect or predict AD in an effective manner. A modified 3D EfficientNet with a sequentially connected 3D mobile inverted bottleneck convolution (MBConv) block is proposed to explore the multiscale characteristics of brain MR images for AD classification. The 3D MBConv block consists of depthwise convolution and a squeeze‐and‐excitation module to transform the input features into more compact features with fewer parameters than those in standard convolution. The proposed method was evaluated considering four classification tasks: (1) NC versus AD, (2) NC versus all MCI, (3) NC versus pMCI, and (4) sMCI versus pMCI. The proposed model achieved accuracies of 95.00%, 86.67%, and 83.33% for the classification of NC versus AD, NC versus pMCI, and sMCI versus pMCI, respectively, and exhibited a high performance in comparison with the classical networks and several existing methods. Efficient deep learning networks are powerful tools for the early diagnosis and prediction of AD.

The phased-array radio frequency (RF) coil plays a vital role in magnetic resonance-guided focused ultrasound (MRgFUS) neuromodulation studies, where accurate brain functional stimulations and neural circuit observations are required. Although various designs of phased-array coils have been reported, few are suitable for ultrasound stimulations. In this study, an MRgFUS neuromodulation system comprised of a whole brain coverage non-human primate (NHP) RF coil and an MRI-compatible ultrasound device was developed. When compared to a single loop coil, the NHP coil provided up to a 50% increase in the signal-to-noise ratio (SNR) in the brain and acquired better anatomical image-quality. The NHP coil also demonstrated the ability to achieve higher spatial resolution and reduce distortion in echo-planer imaging (EPI). Ultrasound beam characteristics and transcranial magnetic resonance acoustic radiation force (MR-ARF) were measured for simulated positions, and calculated B0 maps were employed to establish MRI-compatibility. The differences between focused off and on ultrasound techniques were measured using SNR, g-factors, and temporal SNR (tSNR) analyses and all deviations were under 2.3%. The EPI images quality and stable tSNR demonstrated the suitability of the MRgFUS neuromodulation system to conduct functional MRI studies. Last, the time course of the blood oxygen level dependent (BOLD) signal of posterior cingulate cortex in a focused ultrasound neuromodulation study was detected and repeated with MR thermometry.

This paper presents registration via embedded maps (REM), a deformable registration algorithm for images with varying topology. The algorithm represents 3-D images as 4-D manifolds in a Riemannian space (referred to as embedded maps). Registration is performed as a surface evolution matching one embedded map to another using a diffusion process. The approach differs from those existing in that it takes an a priori estimation of image regions where topological changes are present, for example lesions, and generates a dense vector field representing both the shape and intensity changes necessary to match the images. The algorithm outputs both a diffeomorphic deformation field and an intensity displacement which corrects the intensity difference caused by topological changes. Multiple sets of experiments are conducted on magnetic resonance imaging (MRI) with lesions from OASIS and ADNI datasets. These images are registered to either a brain template or images of healthy individuals. An exemplar case registering a template to an MRI with tumor is also given. The resulting deformation fields were compared with those obtained using diffeomorphic demons, where topological changes are not modeled. These sets of experiments demonstrate the efficacy of our proposed REM method for registration of brain MRI with severe topological differences.

Image-analysis methods play an important role in helping detect brain changes in and diagnosis of Alzheimer's Disease (AD). In this paper, we propose an automatic unsupervised classification approach to distinguish brain magnetic resonance (MR) images of AD patients from those of elderly normal controls. The symmetric log-domain diffeomorphic demons algorithm, with the properties of symmetry and invertibility, is used to compute the pair-wise registration, whose deformation field is then used to calculate the Riemannian distance between them. The spectral embedding algorithm is performed based on the Riemannian distance matrix to project images onto a low-dimensional space where each image is represented as a point and its neighboring points correspond to images of high anatomical similarity. Finally, the quick shift clustering method is employed in the embedded space to partition the dataset into subgroups. The experiments using the proposed method show very good performance for clustering images into AD and normal aging, using the Clinical Dementia Rating (CDR) scale as a comparison.