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S. Deret

dblp:10/2780 · DBLP profile ↗
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1ranked-venue papers
1as first author
0since 2021 · last 1995
—ORCID · none

Domains — the database's venue-derived domains; a paper can count in several

Applied, interdisciplinary, general and emerging computing · 1 · 1 first-author

Expertise — from the expertise taxonomy: the topics of the expert's papers under the CCF categories. A weight counts papers with recency: 1 for a paper about the topic, 0.3 when the topic is its context, halved every five years.

Interdisciplinary, comprehensive, and emerging computing
1 paper
Bioinformatics and computational biology · 100%

Topics — the 4 heaviest of 4, each with the papers that count most for it

TopicWeightPapersLastEvidence papers
Bioinformatics and computational biology › protein sequence analysis
antibody sequence analysis		 0.011995
SUBIM: a program for analysing the Kabat database and determining the variability subgroup of a new immunoglobulin sequence · Comput. Appl. Biosci. 1995
Bioinformatics and computational biology
immunoinformatics		 0.011995
SUBIM: a program for analysing the Kabat database and determining the variability subgroup of a new immunoglobulin sequence · Comput. Appl. Biosci. 1995
Bioinformatics and computational biology
sequence analysis		 0.011995
SUBIM: a program for analysing the Kabat database and determining the variability subgroup of a new immunoglobulin sequence · Comput. Appl. Biosci. 1995
Bioinformatics and computational biology › sequence analysis › sequence similarity search
sequence database search		 0.011995
SUBIM: a program for analysing the Kabat database and determining the variability subgroup of a new immunoglobulin sequence · Comput. Appl. Biosci. 1995

Methods — techniques the papers use, named apart from their topics

variability subgroup determination · 0.0automatic alignment · 0.0
YearPublicationVenuePosition
1995 SUBIM: a program for analysing the Kabat database and determining the variability subgroup of a new immunoglobulin sequence
abstract
Although various programs are available to extract all the information included in protein sequence databases, none is dedicated to immunoglobulins. For this purpose, we designed a program, SUBIM, which is adapted to the Kabat database specialized in immunoglobulin sequences. Besides all the possibilities of any database searching program, SUBIM analyses new sequences of variable regions and determines the variability subgroup they belong to. It also numbers the new sequence according to the system established by Kabat and co-workers for an easier comparison with the other immunoglobulins, thus realizing an automatic alignment with other members of a given type of immunoglobulin chain. This program is largely machine independent and requires very little memory, and should help biochemists concerned with new immunoglobulin sequences.
S. Deret, C. Maissiat, P. Aucouturier, Jacques Chomilier
 Comput. Appl. Biosci.1