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David McAlpine

dblp:119/2324 · DBLP profile ↗
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10ranked-venue papers
0as first author
7since 2021 · last 2024
0000-0001-5467-6725ORCID · verified

Domains — the database's venue-derived domains; a paper can count in several

Artificial intelligence and machine learning · 6 · 4 since 2021Graphics, computer vision, multimedia, augmented reality and games · 3 · 1 since 2021Applied, interdisciplinary, general and emerging computing · 2 · 2 since 2021Databases, data management, data science and information retrieval · 1 · 1 since 2021

Expertise — from the expertise taxonomy: the topics of the expert's papers under the CCF categories. A weight counts papers with recency: 1 for a paper about the topic, 0.3 when the topic is its context, halved every five years.

Interdisciplinary, comprehensive, and emerging computing
2 papers
Bioinformatics and computational biology · 63% Medical and health informatics · 37%
Databases, data mining, and information retrieval
1 paper
Data mining · 100%
Artificial intelligence
1 paper
Graph learning · 100%
Computer networks
1 paper
Physical-layer communications · 100%

Topics — the 9 heaviest of 9, each with the papers that count most for it

TopicWeightPapersLastEvidence papers
Bioinformatics and computational biology › neuroscience
neuroinformatics
0.922024
Semi-Supervised EEG Clustering With Multiple Constraints · IEEE Trans. Knowl. Data Eng. 2023
Graph Neural Networks for Brain Graph Learning: A Survey · IJCAI 2024
Machine learning › Graph learning
graph neural network
0.812024
Graph Neural Networks for Brain Graph Learning: A Survey · IJCAI 2024
Medical and health informatics
EEG analysis
0.712023
Semi-Supervised EEG Clustering With Multiple Constraints · IEEE Trans. Knowl. Data Eng. 2023
Data mining
clustering
0.712023
Semi-Supervised EEG Clustering With Multiple Constraints · IEEE Trans. Knowl. Data Eng. 2023
Data mining › clustering
semi-supervised clustering
0.712023
Semi-Supervised EEG Clustering With Multiple Constraints · IEEE Trans. Knowl. Data Eng. 2023
Bioinformatics and computational biology › neuroscience › neuroinformatics
brain network analysis
0.212024
Graph Neural Networks for Brain Graph Learning: A Survey · IJCAI 2024
Physical-layer communications › digital signal processing
acoustic signal processing
0.212014
Cochlear Implant Filterbank Design and Optimization: A Simulation Study · IEEE ACM Trans. Audio Speech Lang. Process. 2014
Physical-layer communications › digital signal processing › acoustic signal processing
hearing aid processing
0.212014
Cochlear Implant Filterbank Design and Optimization: A Simulation Study · IEEE ACM Trans. Audio Speech Lang. Process. 2014
Physical-layer communications › digital signal processing › filter bank
filter bank design
0.112014
Cochlear Implant Filterbank Design and Optimization: A Simulation Study · IEEE ACM Trans. Audio Speech Lang. Process. 2014

Methods — techniques the papers use, named apart from their topics

graph neural network · 1.5semi-supervised learning · 1.3multi-constraint optimization · 1.3graph embedding · 1.3tone-excited vocoder · 0.2gammatone filter · 0.2differentiated all-pole filter · 0.2butterworth filters · 0.2
YearPublicationVenuePosition
2024 Graph Neural Networks for Brain Graph Learning: A Survey
Xuexiong Luo, Jia Wu 0001, Jian Yang 0001, Shan Xue 0001, Amin Beheshti, Quan Z. Sheng, David McAlpine, Paul F. Sowman, Alexis Giral, Philip S. Yu
IJCAI7
2024 Deep Factor Learning for Accurate Brain Neuroimaging Data Analysis on Discrimination for Structural MRI and Functional MRI
abstract
Analysis of neuroimaging data (e.g., Magnetic Resonance Imaging, structural and functional MRI) plays an important role in monitoring brain dynamics and probing brain structures. Neuroimaging data are multi-featured and non-linear by nature, and it is a natural way to organise these data as tensors prior to performing automated analyses such as discrimination of neurological disorders like Parkinson's Disease (PD) and Attention Deficit and Hyperactivity Disorder (ADHD). However, the existing approaches are often subject to performance bottlenecks (e.g., conventional feature extraction and deep learning based feature construction), as these can lose the structural information that correlates multiple data dimensions or/and demands excessive empirical and application-specific settings. This study proposes a Deep Factor Learning model on a Hilbert Basis tensor (namely, HB-DFL) to automatically derive latent low-dimensional and concise factors of tensors. This is achieved through the application of multiple Convolutional Neural Networks (CNNs) in a non-linear manner along all possible dimensions with no assumed a priori knowledge. HB-DFL leverages the Hilbert basis tensor to enhance the stability of the solution by regularizing the core tensor to allow any component in a certain domain to interact with any component in the other dimensions. The final multi-domain features are handled through another multi-branch CNN to achieve reliable classification, exemplified here using MRI discrimination as a typical case. A case study of MRI discrimination has been performed on public MRI datasets for discrimination of PD and ADHD. Results indicate that 1) HB-DFL outperforms the counterparts in terms of FIT, mSIR and stability (mSC and umSC) of factor learning; 2) HB-DFL identifies PD and ADHD with an accuracy significantly higher than state-of-the-art methods do. Overall, HB-DFL has significant potentials for neuroimaging data analysis applications with its stability of automatic construction of structural features.
Hengjin Ke, Dan Chen 0001, Quanming Yao, Yunbo Tang, Jia Wu 0001, Jessica Monaghan, Paul F. Sowman, David McAlpine
IEEE Trans. Comput. Biol. Bioinform.8
2023 Functional connectivity learning via Siamese-based SPD matrix representation of brain imaging data
Yunbo Tang, Dan Chen 0001, Jia Wu 0001, Weiping Tu, Jessica Monaghan, Paul F. Sowman, David McAlpine
Neural Networks7
2023 Corrigendum to "Functional Connectivity Learning via Siamese-based SPD Matrix Representation of Brain Imaging Data" [Neural Networks 163 (2023) 272-285]
Yunbo Tang, Dan Chen 0001, Jia Wu 0001, Weiping Tu, Jessica Monaghan, Paul F. Sowman, David McAlpine
Neural Networks7
2023 Disentangled and Side-Aware Unsupervised Domain Adaptation for Cross-Dataset Subjective Tinnitus Diagnosis
abstract
EEG-based tinnitus classification is a valuable tool for tinnitus diagnosis, research, and treatments. Most current works are limited to a single dataset where data patterns are similar. But EEG signals are highly non-stationary, resulting in model's poor generalization to new users, sessions or datasets. Thus, designing a model that can generalize to new datasets is beneficial and indispensable. To mitigate distribution discrepancy across datasets, we propose to achieve Disentangled and Side-aware Unsupervised Domain Adaptation (DSUDA) for cross-dataset tinnitus diagnosis. A disentangled auto-encoder is developed to decouple class-irrelevant information from the EEG signals to improve the classifying ability. The side-aware unsupervised domain adaptation module adapts the class-irrelevant information as domain variance to a new dataset and excludes the variance to obtain the class-distill features for the new dataset classification. It also aligns signals of left and right ears to overcome inherent EEG pattern difference. We compare DSUDA with state-of-the-art methods, and our model achieves significant improvements over competitors regarding comprehensive evaluation criteria. The results demonstrate our model can successfully generalize to a new dataset and effectively diagnose tinnitus.
Zhe Liu 0023, Lina Yao 0001, Jessica Monaghan, David McAlpine
IEEE J. Biomed. Health Informatics5
2023 Semi-Supervised EEG Clustering With Multiple Constraints
abstract
Electroencephalogram (EEG)-based applications in Brain-Computer Interfaces (BCIs, or Human-Machine Interfaces, HMIs), diagnosis of neurological disease, rehabilitation,etc, rely on supervised techniques such as EEG classification that requires given class labels or markers. Incomplete or incorrectly labeled or unlabeled EEG data are increasing with the ever-expanding amount of EEG data generated by such applications and the ambiguities these generate degrade the performance of supervised techniques. To address the challenging task of clustering EEG data with limitedprioriknowledge, we introduce a semi-supervised graph embedding EEG clustering approach termedConsEEGcwith multiple constraints,i.e., label-transformed connectivity constraints that constrains the connection or disconnection among EEG data, compactness-and-scatter constraint that constrains the intra-cluster compactness and inter-cluster scatter of EEG clusters, and fairness constraint that constrains the fair ratio of elements between EEG clusters, to make best use of limitedprioriknowledge of EEG data and to achieve better EEG clustering results.ConsEEGcis conducted with an optimization objective function that integrates pseudo label learning, least-square error minimization and multiple constraints, and it can quickly converge to local optima. The experiments demonstrate thatConsEEGccan efficiently yield good clustering results on various types of real-world EEG datasets, compared to state-of-the-art standard unsupervised and semi-supervised EEG/time series clustering algorithms.
Chenglong Dai, Jia Wu 0001, Jessica Monaghan, Guanghui Li 0001, Hao Peng 0001, Stefanie I. Becker, David McAlpine
IEEE Trans. Knowl. Data Eng.7
2022 Deep reinforcement learning guided graph neural networks for brain network analysis
Xusheng Zhao, Jia Wu 0001, Hao Peng 0001, Amin Beheshti, Jessica Monaghan, David McAlpine, Heivet Hernandez-Perez, Mark Dras, Qiong Dai, Philip S. Yu, Lifang He 0001
Neural Networks6
2019 A Spiking Neural Network Approach to Auditory Source Lateralisation
abstract
A novel approach to multi-microphone acoustic source localisation based on spiking neural networks is presented. We demonstrate that a two microphone system connected to a spiking neural network can be used to localise acoustic sources based purely on inter microphone timing differences, with no need for manually configured delay lines. A two sensor example is provided which includes 1) a front end which converts the acoustic signal to a series of spikes, 2) a hidden layer of spiking neurons, 3) an output layer of spiking neurons which represents the location of the acoustic source. We present details on training the network, and evaluation of its performance in quiet and noisy conditions. The system is trained on two locations, and we show that the lateralisation accuracy is 100% when presented with previously unseen data in quiet conditions. We also demonstrate the network generalises to modulation rates and background noise on which it was not trained.
Robert Luke, David McAlpine
ICASSP2
2014 Cochlear Implant Filterbank Design and Optimization: A Simulation Study
abstract
Cochlear implants (CIs) are devices capable of restoring hearing function in profoundly-deaf patients to an acceptable degree of performance. An essential processing step in any cochlear implant is frequency analysis, which is usually performed via banks of filters. Here, we simulate and test the suitability of different filters and filterbank architectures for CIs with respect to their performance in speech intelligibility. Four different filters were implemented in an established model of CI hearing, the tone-excited vocoder, namely: GTF (Gammatone Filter), DAPGF (Differentiated All-Pole GTF), OZGF (One-Zero GTF) and BUTF (Butterworth). Three filterbank parameters, the filter order ( N), the filter quality factor ( Q) and the number of channels ( Ch), and their combinations were tested using objective and subjective metrics. Simulation results show that all filters tested are suitable for CI implementation, but that the choice of Q and N parameter values is crucial. For most conditions, optimal ( N,Q) combinations were within few units away from the combination (2, 4).
Stefano Cosentino, Tiago H. Falk, David McAlpine, Torsten Marquardt
IEEE ACM Trans. Audio Speech Lang. Process.3
2013 Predicting the bilateral advantage in cochlear implantees using a non-intrusive speech intelligibility measure
abstract
A measure to predict speech intelligibility in unilateral and bi-lateral cochlear implant (CI) users is proposed that does not need a priori information (i.e. is non-intrusive), such as the room acoustics. Such measure, termed BiSIMCI, combines an equalization-cancellation stage together with a modulation frequency estimation stage. Simulated and actual subjective data from CI users were used to validate the proposed mea-sure. The actual CI subjective data consisted of speech re-ception thresholds (SRTs) collected in anechoic rooms with a total of 28 target/interferer spatial configurations. The simu-lated CI subjective data were generated by running the intrusive algorithm by Culling et al. [Ear & Hearing 33 (6), 673-682 (2012)] across 109 different target/interferer conditions from two environments, one anechoic and one highly reverberant room (RT60 = 0.89s). The experimental results indicate that the proposed non-intrusive measure provides reliable predic-tions when compared with both actual and simulated SRT; an average correlation of 0.94 was reported for these conditions, and an average correlation of 0.97 was obtained when some in-trusive assumptions were made. 1.
Stefano Cosentino, Tiago H. Falk, David McAlpine
INTERSPEECH3