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Shuo Yu 0001

dblp:147/8566-1 · DBLP profile ↗
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47ranked-venue papers
17as first author
40since 2021 · last 2026
0000-0003-1124-9509ORCID · conflict

Domains — the database's venue-derived domains; a paper can count in several

Artificial intelligence and machine learning · 19 · 5 first-author · 17 since 2021Databases, data management, data science and information retrieval · 19 · 7 first-author · 17 since 2021Applied, interdisciplinary, general and emerging computing · 17 · 7 first-author · 13 since 2021Computer networks · 3 · 1 first-author · 1 since 2021Systems, architecture and hardware · 2 · 2 since 2021Graphics, computer vision, multimedia, augmented reality and games · 2 · 2 since 2021

Expertise — from the expertise taxonomy: the topics of the expert's papers under the CCF categories. A weight counts papers with recency: 1 for a paper about the topic, 0.3 when the topic is its context, halved every five years.

Artificial intelligence
10 papers
Graph learning · 35% Trustworthy machine learning · 32% Representation and self-supervised learning · 8%
Databases, data mining, and information retrieval
6 papers
Recommender systems · 64% Information retrieval · 11% Data mining · 11%
Interdisciplinary, comprehensive, and emerging computing
2 papers
Medical and health informatics · 60% Bioinformatics and computational biology · 40%

Topics — the 30 heaviest of 38, each with the papers that count most for it

TopicWeightPapersLastEvidence papers
Machine learning › Trustworthy machine learning
fairness
2.532026
When to Invoke: Refining LLM Fairness with Toxicity Assessment · WWW 2026
FUGNN: Harmonizing Fairness and Utility in Graph Neural Networks · KDD 2024
FairGT: A Fairness-aware Graph Transformer · IJCAI 2024
Machine learning › Graph learning › graph neural network
graph transformer
2.432025
Biologically Plausible Brain Graph Transformer · ICLR 2025
Long-range Brain Graph Transformer · NeurIPS 2024
FairGT: A Fairness-aware Graph Transformer · IJCAI 2024
Machine learning › Representation and self-supervised learning › contrastive learning
graph contrastive learning
2.022026
SPGCL: Subgraph Pattern-Aware Graph Contrastive Learning for High-Order Structural Representation · WWW 2026
Missingness-aware Federated Contrastive Learning on Semantic Graphs · WWW 2026
Recommender systems
explainable recommendation
1.922026
Explaining Synergistic Effects in Social Recommendations · WWW 2026
CaGE: A Causality-inspired Graph Neural Network Explainer for Recommender Systems · ACM Trans. Inf. Syst. 2025
Machine learning › Graph learning › graph neural network
brain network analysis
1.622025
Biologically Plausible Brain Graph Transformer · ICLR 2025
Long-range Brain Graph Transformer · NeurIPS 2024
Machine learning › Graph learning
graph neural network
1.622025
Biologically Plausible Brain Graph Transformer · ICLR 2025
FUGNN: Harmonizing Fairness and Utility in Graph Neural Networks · KDD 2024
Machine learning › Efficient and distributed learning
federated and distributed training
1.012026
Missingness-aware Federated Contrastive Learning on Semantic Graphs · WWW 2026
Machine learning › Efficient and distributed learning
federated learning
1.012026
Missingness-aware Federated Contrastive Learning on Semantic Graphs · WWW 2026
Natural language and speech › Language models and text generation
large language model
1.012026
When to Invoke: Refining LLM Fairness with Toxicity Assessment · WWW 2026
Machine learning › Graph learning › graph foundation model
large language model on graph
1.012026
Graph2text or Graph2token: A Perspective of Large Language Models for Graph Learning · ACM Trans. Inf. Syst. 2026
Machine learning › Graph learning › graph representation learning
node representation learning
1.012026
SPGCL: Subgraph Pattern-Aware Graph Contrastive Learning for High-Order Structural Representation · WWW 2026
Machine learning › Trustworthy machine learning › AI safety › content safety
toxicity analysis
1.012026
When to Invoke: Refining LLM Fairness with Toxicity Assessment · WWW 2026
Web and social media mining
citation network analysis
1.012026
PatentMerit: A Holistic System for In-depth Technology Understanding · SIGIR 2026
Recommender systems
debiased recommendation
1.012026
Bridging Semantic Understanding and Popularity Bias with LLMs · WWW 2026
Recommender systems
fairness-aware recommendation
1.012026
Bridging Semantic Understanding and Popularity Bias with LLMs · WWW 2026
Recommender systems › collaborative filtering
popularity bias
1.012026
Bridging Semantic Understanding and Popularity Bias with LLMs · WWW 2026
Recommender systems
social recommendation
1.012026
Explaining Synergistic Effects in Social Recommendations · WWW 2026
Knowledge, reasoning and agents › Knowledge representation and reasoning › relational reasoning
hypergraph reasoning
0.912025
SpeechHGT: A Multimodal Hypergraph Transformer for Speech-Based Early Alzheimer's Disease Detection · IJCAI 2025
Machine learning › Trustworthy machine learning
interpretability
0.912025
Factor Graph-based Interpretable Neural Networks · ICLR 2025
Machine learning › Trustworthy machine learning › interpretability › explainable AI
interpretable neural network
0.912025
Factor Graph-based Interpretable Neural Networks · ICLR 2025
Computer vision › Vision and language
multimodal reasoning
0.912025
SpeechHGT: A Multimodal Hypergraph Transformer for Speech-Based Early Alzheimer's Disease Detection · IJCAI 2025
Machine learning › Trustworthy machine learning › interpretability › post-hoc explanation
perturbation-based explanation
0.912025
Factor Graph-based Interpretable Neural Networks · ICLR 2025
Machine learning › Trustworthy machine learning
robustness
0.912025
Factor Graph-based Interpretable Neural Networks · ICLR 2025
Data mining › causal inference
causal explanation
0.912025
CaGE: A Causality-inspired Graph Neural Network Explainer for Recommender Systems · ACM Trans. Inf. Syst. 2025
Recommender systems › explainable recommendation
post-hoc explanation
0.912025
CaGE: A Causality-inspired Graph Neural Network Explainer for Recommender Systems · ACM Trans. Inf. Syst. 2025
Machine learning › Trustworthy machine learning › fairness › fair graph learning
fair graph neural network
0.812024
FUGNN: Harmonizing Fairness and Utility in Graph Neural Networks · KDD 2024
Machine learning › Graph learning › graph neural network › spectral graph neural network
spectral graph convolution
0.812024
FUGNN: Harmonizing Fairness and Utility in Graph Neural Networks · KDD 2024
Bioinformatics and computational biology › neuroscience › neuroinformatics
brain network analysis
0.812024
Long-range Brain Graph Transformer · NeurIPS 2024
Medical and health informatics › neuroimaging
neuroimaging analysis
0.812024
Long-range Brain Graph Transformer · NeurIPS 2024
Medical and health informatics › clinical diagnosis
neurological disease diagnosis
0.812024
Long-range Brain Graph Transformer · NeurIPS 2024

Methods — techniques the papers use, named apart from their topics

large language model · 4.0transformer · 2.3topology estimation · 2.0rate-distortion theory · 2.0graph reconstruction · 2.0subgraph pattern mining · 1.0network analysis · 1.0instruction-based prompting · 1.0graph information gain · 1.0data mining · 1.0contrastive learning · 1.0conditional entropy optimization · 1.0self-attention · 0.9node importance encoding · 0.9logical rules · 0.9factor graph · 0.9backdoor adjustment · 0.9adversarial training · 0.9
YearPublicationVenuePosition
2026 PatentMerit: A Holistic System for In-depth Technology Understanding
abstract
Demand for precise evaluation and in-depth analysis of patent technology value has become increasingly urgent with the accelerated iteration of innovation, while existing patent platforms primarily focus on surface-level bibliographic information, offering limited support for understanding the technological value and evolutionary trajectories of patents. Hence, we develop PatentMerit, a comprehensive system for in-depth analysis of the value of patents, based on large language models, network analysis, and data mining techniques. PatentMerit features five core functionalities, including multidimensional patent classification retrieval, disruptive technology identification, citation network and technology evolution visualization, topic semantic analysis, and automated comprehensive report generation. Its core strength lies in transcending single data element analysis to conduct in-depth exploration, such as accurate technology assessment of individual patents and their technological clusters, which reduces the cognitive and operational burden for R&D personnel. PatentMerit serves as an intelligent decision-making tool for technology trend forecasting, R&D decision-making, and patent strategy planning. The PatentMerit system is accessible via the following link: https://patentmerit.com/.
Tianxiang Xie, Jingxuan Wu, Jiaying Liu 0006, Junxiang Zhang, Shuo Yu 0001
SIGIR5
2026 Explaining Synergistic Effects in Social Recommendations
abstract
In social recommenders, the inherent nonlinearity and opacity of synergistic effects across multiple social networks hinders users from understanding how diverse information is leveraged for recommendations, consequently diminishing explainability. However, existing explainers can only identify the topological information in social networks that significantly influences recommendations, failing to further explain the synergistic effects among this information. Inspired by existing findings that synergistic effects enhance mutual information between inputs and predictions to generate information gain, we extend this discovery to graph data. We quantify graph information gain to identify subgraphs embodying synergistic effects. Based on the theoretical insights, we propose SemExplainer, which explains synergistic effects by identifying subgraphs that embody them. SemExplainer first extracts explanatory subgraphs from multi-view social networks to generate preliminary importance explanations for recommendations. A conditional entropy optimization strategy to maximize information gain is developed, thereby further identifying subgraphs that embody synergistic effects from explanatory subgraphs. Finally, SemExplainer searches for paths from users to recommended items within the synergistic subgraphs to generate explanations for the recommendations. Extensive experiments on three datasets demonstrate the superiority of SemExplainer over baseline methods, providing superior explanations of synergistic effects. The implementation is available at https://github.com/yushuowiki/SemExplainer.
Yicong Li 0006, Shan Jin 0003, Shuo Wang 0040, Jiaying Liu 0006, Shuo Yu 0001, Qiang Zhang 0008, Kuanjiu Zhou, Feng Xia 0001
WWW6
2026 Bridging Semantic Understanding and Popularity Bias with LLMs
abstract
Semantic understanding of popularity bias is a crucial yet underexplored challenge in recommender systems, where popular items are often favored at the expense of niche content. Most existing debiasing methods treat the semantic understanding of popularity bias as a matter of diversity enhancement or long-tail coverage, neglecting the deeper semantic layer that embodies the causal origins of the bias itself. Consequently, such shallow interpretations limit both their debiasing effectiveness and recommendation accuracy. In this paper, we propose FairLRM, a novel framework that bridges the gap in the semantic understanding of popularity bias with Recommendation via Large Language Model (RecLLM). FairLRM decomposes popularity bias into item-side and user-side components, using structured instruction-based prompts to enhance the model's comprehension of both global item distributions and individual user preferences. Unlike traditional methods that rely on surface-level features such as ''diversity'' or ''debiasing'', FairLRM improves the model's ability to semantically interpret and address the underlying bias. Through empirical evaluation, we demonstrate that FairLRM enhances fairness and recommendation accuracy through a trustworthy, semantically grounded treatment of popularity bias. The source code is shown in https://github.com/LuoRenqiang/FairLRM.
Renqiang Luo, Yupeng Gao, Mingliang Hou, Jiaying Liu 0006, Shuo Yu 0001
WWW8
2026 When to Invoke: Refining LLM Fairness with Toxicity Assessment
Jing Ren 0001, Bowen Li 0012, Ziqi Xu 0001, Renqiang Luo, Shuo Yu 0001, Xin Ye 0004, Haytham M. Fayek, Xiaodong Li 0001, Feng Xia 0001
WWW5
2026 Missingness-aware Federated Contrastive Learning on Semantic Graphs
abstract
Semantic graphs are fundamental to the Web, enabling applications such as semantic search, recommendation, and knowledge-intensive reasoning. In decentralized Web environments, however, these graphs are distributed across organizations and constrained by strict privacy policies, making centralized training infeasible. Federated learning provides a promising solution, yet its effectiveness is severely limited by the dual incompleteness of real-world semantic graphs: missing node attributes and incomplete relational structures. Such dual missingness, often heterogeneous and unobserved across clients, causes substantial degradation in model performance. We present FedCL, a missingness-aware federated contrastive learning framework for dual-incomplete semantic graphs. FedCL introduces two key components: a topology estimation module, grounded in rate–distortion theory, that privately quantifies structural incompleteness across clients, and a federated reconstruction module that leverages these estimations to generate plausible relations without inferring sensitive attributes. To further improve robustness, FedCL integrates graph contrastive learning across reconstructed subgraphs, ensuring semantic consistency across heterogeneous and incomplete client graphs. Experiments on benchmark citation and Web datasets demonstrate that FedCL consistently outperforms state-of-the-art baselines in accuracy and robustness under heterogeneous missingness, while preserving strong privacy guarantees. These results highlight FedCL as a scalable and trustworthy approach for federated learning on incomplete semantic graphs, advancing privacy-preserving knowledge sharing on the Web.
Shuo Yu 0001, Zhuoyang Han, Guoqing Han, Tao Tang 0007, Feng Ding 0004, Qiang Zhang 0008
WWW1
2026 SPGCL: Subgraph Pattern-Aware Graph Contrastive Learning for High-Order Structural Representation
abstract
Graph contrastive learning has emerged as a promising self-supervised approach for node representation learning, reducing reliance on human annotations. However, its limitation for modeling high-order structures leads to: loss of critical edges and nodes, diminished discriminability for higher-order semantics, and indistinguishable negative samples. To address these limitations, we propose SPGCL, a Subgraph Pattern-Aware Graph Contrastive Learning for Structural Representation. SPGCL enables the model to capture high-order structures by leveraging subgraph patterns. Specifically, SPGCL introduces subgraph patterns to differentiate high-order structures and preserve edges crucial for distinguishing these structures. In addition, it internalizes the subgraph pattern features into SP edge features, SP node features, and SP adjacency matrices to provide a more comprehensive structural representation. Furthermore, it utilizes subgraph pattern similarity and distance similarity, and restructures graph contrastive loss to sharpen negative-sample discrimination. Experiments on six real-world datasets demonstrate that SPGCL significantly outperforms state-of-the-art baselines.
Zhe Zhan, Xiangshi Li, Shuo Yu 0001, Henan Lei
WWW4
2026 Utility-Preserving Federated Graph Learning With Dual-Perspective Fairness
abstract
Fairness-aware federated graph neural networks (FedGNNs) necessitate consideration of both the server and the clients. However, fairness-aware methods struggle to enhance dual-perspective (i.e., server and clients) fairness without sacrificing utility due to the distributed learning framework. As a consequence, the utility sacrifices of fairness-aware graph learning methods are even exacerbated in federated frameworks. In this work we propose F3GL, a dual-perspective fairness federated graph learning method that enhances both global (for the server) and local fairness (for clients) while preserving utility. Through theoretical analysis, we delineate the similarity between original sensitive features and those after convolution under different spectra. Our findings reveal that only the principal eigenvalue contributes to enhancing this similarity. Moreover, our theoretical analysis applies universally to both clients and servers. Specifically, employing a specialized eigenvalue selection strategy allows for effective optimization of both local and global fairness. Drawing on these insights, we improve dual-perspective fairness through the lens of spectral graph theory without sacrificing utility. Experimental results on two real-world datasets show the superiority of F3GL over existing baselines.
Renqiang Luo, Huafei Huang 0001, Shuo Yu 0001, Fengqi Yu, Feng Xia 0001, Sajal K. Das 0001, Chengqi Zhang
IEEE Trans. Pattern Anal. Mach. Intell.3
2026 RMTrans: Robust Multimodal Transformers for Patient Prognosis under Backdoor Threats
abstract
Transformers, with their self-attention mechanisms and positional encoding, excel at modeling long-range dependencies. Such attribute has demonstrated significant potential in capturing complex disease patterns by integrating multimodal information, for example clinical notes and radiographs. However, their reliance on pre-trained deep neural networks to extract modality-specific features from large datasets makes them vulnerable to backdoor attacks, posing critical challenges for their deployment in healthcare applications. To address these vulnerabilities, we propose a robust multimodal Transformer-based framework, RMTrans, which mitigates the impact of malicious imaging data containing backdoor triggers while enhancing the model’s robustness. In the imaging data pre-processing stage, we introduce an efficient patch-based processing method that shifts the model’s focus toward learning global features rather than overfitting to localized (patch-level) patterns, thereby ensuring a more secure and reliable training process. Following this, we fuse multimodal representations and train a Vision Transformer (ViT) for disease prediction. Extensive experiments conducted on real-world datasets, including MIMIC-IV and MIMIC-CXR, validate the effectiveness of RMTrans. The proposed framework outperforms state-of-the-art baselines, demonstrating its potential as a secure and reliable solution for multimodal disease prediction.
Tao Tang 0007, Guoqing Han, Renqiang Luo, Feng Ding 0016, Shuo Yu 0001, Ivan Lee 0001
ACM Trans. Intell. Syst. Technol.5
2026 Graph Transformers: A Survey
abstract
Graph transformers are a recent advancement in machine learning, offering a new class of neural network models for graph-structured data. The synergy between transformers and graph learning demonstrates strong performance and versatility across various graph-related tasks. This survey provides an in-depth review of recent progress and challenges in graph transformer research. We begin with foundational concepts of graphs and transformers. We then explore design perspectives of graph transformers, focusing on how they integrate graph inductive biases and graph attention mechanisms into the transformer architecture. Furthermore, we propose a taxonomy classifying graph transformers based on depth, scalability, and pretraining strategies, summarizing key principles for effective development of graph transformer models. Beyond technical analysis, we discuss the applications of graph transformer models for node-level, edge-level, and graph-level tasks, exploring their potential in other application scenarios as well. Finally, we identify remaining challenges in the field, such as scalability and efficiency, generalization and robustness, interpretability and explainability, dynamic and complex graphs, as well as data quality and diversity, charting future directions for graph transformer research.
Ahsan Shehzad, Feng Xia 0001, Shagufta Abid, Ciyuan Peng, Shuo Yu 0001, Dongyu Zhang 0001, Karin Verspoor
IEEE Trans. Neural Networks Learn. Syst.5
2026 Graph2text or Graph2token: A Perspective of Large Language Models for Graph Learning
abstract
Graphs are prevalent in numerous real-world applications. Previous methods directly model graph structures and achieve significant success. However, these methods encounter bottlenecks due to the inherent irregularity of graphs. An innovative solution is converting graphs into textual representations, thereby harnessing the powerful capabilities of Large Language Models (LLMs) to process and comprehend graphs. In this article, we present a comprehensive review of methodologies for applying LLMs to graphs, termed LLM4graph. The core of LLM4graph lies in transforming graphs into texts for LLMs to understand and analyze. Thus, we propose a novel taxonomy of LLM4graph methods from the view of the transformation. Specifically, existing methods can be divided into two paradigms: Graph2text and Graph2token, which transform graphs into texts or tokens as the input of LLMs, respectively. We point out four challenges during the transformation to systematically present existing methods from a problem-oriented perspective. For practical concerns, we provide a guideline for researchers on selecting appropriate models and LLMs for different graphs and hardware constraints. To empirically evaluate our taxonomy and different technical choices, we conduct experiments with representative methods in Graph2text and Graph2token. We also identify five future research directions for LLM4graph.
Shuo Yu 0001, Ruolin Li, Guchun Liu, Yanming Shen, Shaoxiong Ji, Bowen Li 0012, Fengling Han, Xiuzhen Zhang 0001, Feng Xia 0001
ACM Trans. Inf. Syst.1
2025 Factor Graph-based Interpretable Neural Networks
abstract
Comprehensible neural network explanations are foundations for a better understanding of decisions, especially when the input data are infused with malicious perturbations. Existing solutions generally mitigate the impact of perturbations through adversarial training, yet they fail to generate comprehensible explanations under unknown perturbations. To address this challenge, we propose AGAIN, a factor graph-based interpretable neural network, which is capable of generating comprehensible explanations under unknown perturbations. Instead of retraining like previous solutions, the proposed AGAIN directly integrates logical rules by which logical errors in explanations are identified and rectified during inference. Specifically, we construct the factor graph to express logical rules between explanations and categories. By treating logical rules as exogenous knowledge, AGAIN can identify incomprehensible explanations that violate real-world logic. Furthermore, we propose an interactive intervention switch strategy rectifying explanations based on the logical guidance from the factor graph without learning perturbations, which overcomes the inherent limitation of adversarial training-based methods in defending only against known perturbations. Additionally, we theoretically demonstrate the effectiveness of employing factor graph by proving that the comprehensibility of explanations is strongly correlated with factor graph. Extensive experiments are conducted on three datasets and experimental results illustrate the superior performance of AGAIN compared to state-of-the-art baselines.
Yicong Li 0006, Kuanjiu Zhou, Shuo Yu 0001, Qiang Zhang 0008, Renqiang Luo, Xiaodong Li 0001, Feng Xia 0001
ICLR3
2025 Biologically Plausible Brain Graph Transformer
abstract
State-of-the-art brain graph analysis methods fail to fully encode the small-world architecture of brain graphs (accompanied by the presence of hubs and functional modules), and therefore lack biological plausibility to some extent. This limitation hinders their ability to accurately represent the brain's structural and functional properties, thereby restricting the effectiveness of machine learning models in tasks such as brain disorder detection. In this work, we propose a novel Biologically Plausible Brain Graph Transformer (BioBGT) that encodes the small-world architecture inherent in brain graphs. Specifically, we present a network entanglement-based node importance encoding technique that captures the structural importance of nodes in global information propagation during brain graph communication, highlighting the biological properties of the brain structure. Furthermore, we introduce a functional module-aware self-attention to preserve the functional segregation and integration characteristics of brain graphs in the learned representations. Experimental results on three benchmark datasets demonstrate that BioBGT outperforms state-of-the-art models, enhancing biologically plausible brain graph representations for various brain graph analytical tasks
Ciyuan Peng, Yuelong Huang, Qichao Dong, Shuo Yu 0001, Feng Xia 0001, Chengqi Zhang, Yaochu Jin
ICLR4
2025 SpeechHGT: A Multimodal Hypergraph Transformer for Speech-Based Early Alzheimer's Disease Detection
abstract
Early detection of Alzheimer's disease (AD) through spontaneous speech analysis represents a promising, non-invasive diagnostic approach. Existing methods predominantly rely on fusion-based multimodal deep learning, effectively integrating linguistic and acoustic features. However, these methods inadequately model higher-order interactions between modalities, reducing diagnostic accuracy. To address this, we introduce SpeechHGT, a multimodal hypergraph transformer designed to capture and learn higher-order interactions in spontaneous speech features. SpeechHGT encodes multimodal features as hypergraphs, where nodes represent individual features and hyperedges represent grouped interactions. A novel hypergraph attention mechanism enables robust modeling of both pairwise and higher-order interactions. Experimental evaluations on the DementiaBank datasets reveal that SpeechHGT achieves state-of-the-art performance, surpassing baseline models in accuracy and F1 score. These results highlight the potential of hypergraph-based models to improve AI-driven diagnostic tools for early AD detection.
Shagufta Abid, Dongyu Zhang 0001, Ahsan Shehzad, Jing Ren 0001, Shuo Yu 0001, Hongfei Lin, Feng Xia 0001
IJCAI5
2025 Multi-type social patterns-based graph learning
Shuo Yu 0001, Zhuoyang Han, Feng Ding 0004, Huafei Huang 0001, Renqiang Luo, Guoqing Han, Feng Xia 0001
Neurocomputing1
2025 Quantum entropy structural encoding for graph neural networks
Feng Ding 0004, Shuo Yu 0001, Yanming Shen
Knowl. Based Syst.3
2025 Dynamic Graph Transformer for Brain Disorder Diagnosis
abstract
Dynamic brain networks play a pivotal role in diagnosing brain disorders by capturing temporal changes in brain activity and connectivity. Previous methods often rely on sliding-window approaches for constructing these networks using fMRI data. However, these methods face two key limitations: a fixed temporal length that inadequately captures brain activity dynamics and a global spatial scope that introduces noise and reduces sensitivity to localized dysfunctions. These challenges can lead to inaccurate brain network representations and potential misdiagnoses.To address these challenges, we propose BrainDGT, a dynamic Graph Transformer model designed to enhance the construction and analysis of dynamic brain networks for more accurate diagnosis of brain disorders. BrainDGT leverages adaptive brain states by deconvolving the Hemodynamic Response Function (HRF) within individual functional brain modules to generate dynamic graphs, addressing the limitations of fixed temporal length and global spatial scope. The model learns spatio-temporal local features through attention mechanisms within these graphs and captures global interactions across modules using adaptive fusion. This dual-level integration enhances the model's ability to analyze complex brain connectivity patterns. We validate BrainDGT's effectiveness through classification experiments on three fMRI datasets (ADNI, PPMI, and ABIDE), where it outperforms state-of-the-art methods. By enabling adaptive, localized analysis of dynamic brain networks, BrainDGT advances neuroimaging and supports the development of more precise diagnostic and treatment strategies in biomedical research.
Ahsan Shehzad, Dongyu Zhang 0001, Shuo Yu 0001, Shagufta Abid, Feng Xia 0001
IEEE J. Biomed. Health Informatics3
2025 Formulating and Representing Multiagent Systems With Hypergraphs
abstract
Graph-learning methods, especially graph neural networks (GNNs), have shown remarkable effectiveness in handling non-Euclidean data and have achieved great success in various scenarios. Existing GNNs are primarily based on message-passing schemes, that is, aggregating information from neighboring nodes. However, the diversity and complexity of complex systems from real-world circumstances are not sufficiently taken into account. In these cases, the individual should be treated as an agent, with the ability to perceive their surroundings and interact with other individuals, rather than just be viewed as nodes in existing graph approaches. Additionally, the pairwise interactions used in existing methods also lack the expressiveness for the higher-order complex relations among multiple agents, thus limiting the performance in various tasks. In this work, we propose a Multiagent Hypergraph Force-learning method dubbed MHGForce. First, we formalize the multiagent system (MAS) and illustrate its connection to graph learning. Then, we propose a generalized multiagent hypergraph-learning framework. In this framework, we integrate message-passing and force-based interactions to devise a pluggable method. The method empowers graph approaches to excel in downstream tasks while effectively maintaining structural information in the representations. Experimental results on the Cora, Citeseer, Cora-CA, Zoo, and NTU2012 datasets in node classification demonstrate the effectiveness and generality of our proposed method. We also discuss the characteristics of the MHGForce and explore its role through parametric analysis and visualization. Finally, we give a discussion, conclude our work, and propose future directions.
Shuo Yu 0001, Huafei Huang 0001, Yanming Shen, Pengfei Wang 0013, Qiang Zhang 0008, Ke Sun 0011, Honglong Chen
IEEE Trans. Neural Networks Learn. Syst.1
2025 CaGE: A Causality-inspired Graph Neural Network Explainer for Recommender Systems
abstract
Generating post hoc causal explanations for graph neural network-based recommender systems is vital for enhancing the credibility and interpretability of recommendations. Existing model-agnostic explainers primarily capture statistical correlations between topological information and recommendation outcomes. However, they often fail to identify true causal relationships due to their model-agnostic design and the challenges posed by heterogeneous graph structures. To address these limitations, we propose a causality-inspired graph neural network explainer for recommender systems, namely CaGE, which generates explanations reflecting causality in recommendation scenarios without accessing the internal parameters of the recommender system. Unlike previous explainers that rely on correlation-based learning, CaGE leverages heterogeneous interventional distributions to eliminate backdoor paths of non-causal variables in the structural causal model of the recommendation task, ensuring causation is accurately captured. Specifically, CaGE incorporates backdoor adjustment based on heterogeneous interventional distributions and causal contrastive learning to optimize a set of heterogeneous soft masks that disentangle causation from non-causation. Additionally, a causality-inspired meta-path search strategy is employed to represent causation as paths between users and recommended items, further enhancing explanation readability. Extensive experiments are conducted on three recommendation datasets, and the experimental results illustrate the superior fidelity of CaGE as compared to state-of-the-art baselines.
Shuo Yu 0001, Yicong Li 0006, Shuo Wang 0040, Tao Tang 0007, Qiang Zhang 0008, Ivan Lee 0001, Feng Xia 0001
ACM Trans. Inf. Syst.1
2024 SPR: A Similar Projection Revisor for Complex Logical Reasoning over Knowledge Graphs
Yuxuan Tang, Ruolin Li, Duo Yu, Bowen Feng, Feng Ding 0004, Shuo Yu 0001, Yanming Shen
WISA7
2024 Identifying Disinformation from Online Social Media via Dynamic Modeling across Propagation Stages
abstract
Identifying disinformation from online social media is crucial for maintaining a credible cyberspace. Although features from the content and propagation topology are widely exploited by existing studies to distinguish disinformation from normal ones, they are becoming less effective as content can be intentionally written to mislead readers and topological features are difficult to be extracted due to the high variance and diversity of reposting trees. Moreover, related works mainly focus on modeling the complete information propagation event, ignoring the staged evolution patterns along with propagation, which may also degrade the detection performance. In this paper, we conceive and implement a novel framework called DMPS for identifying disinformation, which Dynamically Models diverse topological structures of reposting trees as well as the textual content streams across different Propagation Stages. In particular, DMPS learns expressive representations of the structural features via meta-trees and extracts sequential features of the content for intra-stage modeling, then it captures temporal dependencies for inter-stage modeling. The whole framework is optimized in a binary classification manner. Experiments based on multilingual social media datasets validate the effectiveness and superiority of DMPS over state-of-the-art models. We believe that this study can provide insights for crisis management in response to disinformation in social network campaigns.
Jianqiu Xu, Shuo Yu 0001, Bohan Li 0001
CIKM3
2024 FairGT: A Fairness-aware Graph Transformer
Renqiang Luo, Huafei Huang 0001, Shuo Yu 0001, Xiuzhen Zhang 0001, Feng Xia 0001
IJCAI3
2024 FUGNN: Harmonizing Fairness and Utility in Graph Neural Networks
abstract
Fairness-aware Graph Neural Networks (GNNs) often face a challenging trade-off, where prioritizing fairness may require compromising utility. In this work, we re-examine fairness through the lens of spectral graph theory, aiming to reconcile fairness and utility within the framework of spectral graph learning. We explore the correlation between sensitive features and spectrum in GNNs, using theoretical analysis to delineate the similarity between original sensitive features and those after convolution under different spectra. Our analysis reveals a reduction in the impact of similarity when the eigenvectors associated with the largest magnitude eigenvalue exhibit directional similarity. Based on these theoretical insights, we propose FUGNN, a novel spectral graph learning approach that harmonizes the conflict between fairness and utility. FUGNN ensures algorithmic fairness and utility by truncating the spectrum and optimizing eigenvector distribution during the encoding process. The fairness-aware eigenvector selection reduces the impact of convolution on sensitive features while concurrently minimizing the sacrifice of utility. FUGNN further optimizes the distribution of eigenvectors through a transformer architecture. By incorporating the optimized spectrum into the graph convolution network, FUGNN effectively learns node representations. Experiments on six real-world datasets demonstrate the superiority of FUGNN over baseline methods. The codes are available at https://github.com/yushuowiki/FUGNN.
Renqiang Luo, Huafei Huang 0001, Shuo Yu 0001, Zhuoyang Han, Estrid He, Xiuzhen Zhang 0001, Feng Xia 0001
KDD3
2024 Long-range Brain Graph Transformer
abstract
Understanding communication and information processing among brain regions of interest (ROIs) is highly dependent on long-range connectivity, which plays a crucial role in facilitating diverse functional neural integration across the entire brain. However, previous studies generally focused on the short-range dependencies within brain networks while neglecting the long-range dependencies, limiting an integrated understanding of brain-wide communication. To address this limitation, we propose Adaptive Long-range aware TransformER (ALTER), a brain graph transformer to capture long-range dependencies between brain ROIs utilizing biased random walk. Specifically, we present a novel long-range aware strategy to explicitly capture long-range dependencies between brain ROIs. By guiding the walker towards the next hop with higher correlation value, our strategy simulates the real-world brain-wide communication. Furthermore, by employing the transformer framework, ALERT adaptively integrates both short- and long-range dependencies between brain ROIs, enabling an integrated understanding of multi-level communication across the entire brain. Extensive experiments on ABIDE and ADNI datasets demonstrate that ALTER consistently outperforms generalized state-of-the-art graph learning methods (including SAN, Graphormer, GraphTrans, and LRGNN) and other graph learning based brain network analysis methods (including FBNETGEN, BrainNetGNN, BrainGNN, and BrainNETTF) in neurological disease diagnosis.
Shuo Yu 0001, Shan Jin 0003, Tabinda Sarwar, Feng Xia 0001
NeurIPS1
2024 Pretraining Molecules with Explicit Substructure Information
abstract
Generative self-supervised learning has recently become popular in molecular modeling because it can improve accuracy and generalization. However, existing generative self-supervised tasks often have simplified designs that do not effectively use substructure information. Substructure information is important for molecules because it can provide local semantics and capture analogous semantic information on a graph-level scale. For example, -OH, as one of the substructures, is typically associated with hydrophilicity. To address this limitation, we propose a novel pretraining task that incorporates substructure information into generative self-supervised tasks. This integration involves creating a substructure-based vocabulary and fusing structural insights into the representation learning process. We evaluate our approach on 10 publicly available datasets, covering diverse molecular property prediction tasks. Our results consistently show the effectiveness of incorporating substructure information compared with both contrastive and generative self-supervised pretraining methodologies.
Shuo Yu 0001, Yanming Shen
SDM2
2024 Marking the Pace: A Blockchain-Enhanced Privacy-Traceable Strategy for Federated Recommender Systems
abstract
Federated recommender systems have been crucially enhanced through data sharing and continuous model updates, attributed to the pervasive connectivity and distributed computing capabilities of Internet of Things (IoT) devices. Given the sensitivity of IoT data, transparent data processing in data sharing and model updates is paramount. However, existing methods fall short in tracing the flow of shared data and the evolution of model updates. Consequently, data sharing is vulnerable to exploitation by malicious entities, raising significant data privacy concerns, while excluding data sharing will result in suboptimal recommendations. To mitigate these concerns, we present LIBERATE, a privacy-traceable federated recommender system. We design a blockchain-based traceability mechanism, ensuring data privacy during data sharing and model updates. We further enhance privacy protection by incorporating local differential privacy in user–server communication. Extensive evaluations with the real-world data set corroborate LIBERATE’s capabilities in ensuring data privacy during data sharing and model update while maintaining efficiency and performance. Results underscore blockchain-based traceability mechanism as a promising solution for privacy preserving in federated recommender systems.
Tao Tang 0007, Shuo Yu 0001, Yunpeng Xiao 0001, Feng Xia 0001
IEEE Internet Things J.3
2024 PANDORA: Deep Graph Learning Based COVID-19 Infection Risk Level Forecasting
abstract
Coronavirus disease 2019 (COVID-19) as a global pandemic causes a massive disruption to social stability that threatens human life and the economy. An effective forecasting system is arguably important to provide an early signal of the risk of COVID-19 infection so that the authorities are ready to protect the people from the worst. However, making a good forecasting model for infection risks in different cities or regions is not an easy task, because it has a lot of influential factors that are difficult to be identified manually. To address the current limitations, we propose a deep graph learning model, called PANDORA, to predict the infection risks of COVID-19, by considering all essential factors and integrating them into a geographical network. The framework uses geographical position relationships and transportation frequency as higher order structural properties formulated by higher order network structures (i.e., network motifs). Moreover, four significant node attributes (i.e., multiple features of a particular area, including climate, medical condition, economy, and human mobility) are also considered. We propose three different aggregators to better aggregate node attributes and structural features, namely, Hadamard, Summation, and Connection. Experimental results over real data show that PANDORA outperforms the baseline methods with higher accuracy and faster convergence speed, no matter which aggregator is chosen.
Shuo Yu 0001, Feng Xia 0001, Yueru Wang, Falih Febrinanto, Madhu Chetty
IEEE Trans. Comput. Soc. Syst.1
2024 Fuzzy Multiview Graph Learning on Sparse Electronic Health Records
abstract
Extracting latent disease patterns from electronic health records (EHRs) is a crucial solution for disease analysis, significantly facilitating healthcare decision-making. Multiview learning presents itself as a promising approach that offers a comprehensive exploration of both structured and unstructured EHRs. However, the intrinsic uncertainty among disease features presents a significant challenge for multiview feature alignment. Besides, the sparsity of real-world EHRs also exacerbates the difficulty of feature alignment. To address these challenges, we introduce a novel fuzzy multiview graph learning framework named FuzzyMVG, which is designed for mitigating the impacts of uncertainty in disease features derived from sparse EHRs. First, we utilize auxiliary information from sparse EHRs to construct a multiview EHR graph using the structured and unstructured records. Then, for efficient feature alignment, we specially design the fuzzy logic-enhanced graph convolutional networks to obtain the fuzzy representations of time-invariant node features. Thereby, we implement a random walk strategy and long short-term memory networks to capture the distinct features of static and dynamic nodes, respectively. Extensive experiments have been conducted on the real-world MIMIC III dataset to validate the effectiveness of FuzzyMVG. Results in the diagnosis prediction task demonstrate that FuzzyMVG outperforms other state-of-the-art baselines.
Tao Tang 0007, Zhuoyang Han, Shuo Yu 0001, Adil M. Bagirov, Qiang Zhang 0008
IEEE Trans. Fuzzy Syst.3
2024 Heterogeneous Network Motif Coding, Counting, and Profiling
abstract
Network motifs, as a fundamental higher-order structure in large-scale networks, have received significant attention over recent years. Particularly in heterogeneous networks, motifs offer a higher capacity to uncover diverse information compared to homogeneous networks. However, the structural complexity and heterogeneity pose challenges in coding, counting, and profiling heterogeneous motifs. This work addresses these challenges by first introducing a novel heterogeneous motif coding method, adaptable to homogeneous motifs as well. Building upon this coding framework, we then propose GIFT, a heterogeneous network motif counting algorithm. GIFT effectively leverages combined structures of heterogeneous motifs through three key procedures: neighborhood searching, motif combination, and redundant motif filtering. We apply GIFT to count three-order and four-order motifs across eight distinct heterogeneous networks. Subsequently, we profile these detected motifs using four classical motif-based indicators. Experimental results demonstrate that by appropriately selecting motifs tailored to specific networks, heterogeneous motifs emerge as significant features in characterizing the underlying network structure.
Shuo Yu 0001, Feng Xia 0001, Honglong Chen, Ivan Lee 0001, Lianhua Chi, Hanghang Tong
ACM Trans. Knowl. Discov. Data1
2024 Personalized Federated Graph Learning on Non-IID Electronic Health Records
abstract
Understanding the latent disease patterns embedded in electronic health records (EHRs) is crucial for making precise and proactive healthcare decisions. Federated graph learning-based methods are commonly employed to extract complex disease patterns from the distributed EHRs without sharing the client-side raw data. However, the intrinsic characteristics of the distributed EHRs are typically non-independent and identically distributed (Non-IID), significantly bringing challenges related to data imbalance and leading to a notable decrease in the effectiveness of making healthcare decisions derived from the global model. To address these challenges, we introduce a novel personalized federated learning framework named PEARL, which is designed for disease prediction on Non-IID EHRs. Specifically, PEARL incorporates disease diagnostic code attention and admission record attention to extract patient embeddings from all EHRs. Then, PEARL integrates self-supervised learning into a federated learning framework to train a global model for hierarchical disease prediction. To improve the performance of the client model, we further introduce a fine-tuning scheme to personalize the global model using local EHRs. During the global model updating process, a differential privacy (DP) scheme is implemented, providing a high-level privacy guarantee. Extensive experiments conducted on the real-world MIMIC-III dataset validate the effectiveness of PEARL, demonstrating competitive results when compared with baselines.
Tao Tang 0007, Zhuoyang Han, Shuo Yu 0001, Xiaokang Zhou, Taiwo Oseni, Sajal K. Das 0001
IEEE Trans. Neural Networks Learn. Syst.4
2023 Query Optimization Mechanism for Blockchain-Based Efficient Data Traceability
Xu Yuan 0002, Fangbo Li, Muhammad Zeeshan Haider, Feng Ding 0004, Ange Qi, Shuo Yu 0001
ICA3PP (6)6
2023 Anomalous Behavior Identification with Visual Federated Learning in Multi-UAVs Systems
abstract
Anomaly detection aims to identify data or behav-iors that are different from the usual patterns. In traditional anomaly detection settings, edge devices collect the data and send it to a centralized server for model training, which faces two critical issues: (1) it risks data exposure during transmission; (2) it demands a large amount of network bandwidth for data transfer. To tackle these problems, we propose a Visual Federated Learning algorithm (VFLA) for anomalous behavior identification in the multi-UAVs system. To the best of our knowledge, we are the first to merge federated learning with video-based anomaly detection. VFLA consists of two phases: The initial phase is training a pseudo-label generator. UAVs collect a dataset and manually annotate it. This labeled data is then used to train the pseudo-label generator on the server, which is subsequently distributed back to the UAVs. The second phase is the federated learning-based anomaly detection model training. UAVs leverage the pseudo-label generator to automatically annotate the collected video footage. These annotated videos are fed into an anomaly detection network for training. Once the local training is completed, UAVs upload their local models to a server for federated aggregation. The global model is then redistributed to the UAVs for additional training rounds, until reach the target accuracy. Finally, we simulate the federated learning anomaly detection algorithm on the Shanghai-tech dataset, it demonstrates an average accuracy boost of 5.6% compared to baselines.
Pengfei Wang 0013, Xinrui Yu, Yefei Ye, Heng Qi, Shuo Yu 0001, Leyou Yang, Qiang Zhang 0008
ICPADS5
2023 MEGA: Explaining Graph Neural Networks with Network Motifs
abstract
Graph Neural Networks (GNNs) are powerful tools for graph representation. However, GNNs have remained black boxes, leading to the lack of explainability. As a consequence, the application of GNNs has been severely limited. Existing methods focus on generating an explanation with important nodes and edges but pay less attention to high-order structures (e.g., network motif), which are more intuitive and important for graph data. The explanations generated by the explainer will thus ignore the high-order information contained in multi-node neighbours, resulting in a decrease in the human comprehensibility of the explanation subgraph. In this paper, we propose a motif-aware GNNs explainer (MEGA), wherein a motif-aware subgraph generation module and a counterfactual optimization layer are employed. MEGA can provide high-quality counterfactual explanations for GNNs while focusing on high-order features of graph data. We justify the effectiveness of the proposed MEGA on both synthetic and real-world datasets. Experimental results show that MEGA outperforms state-of-the-art baselines while keeping explanations at a smaller level.
Feng Ding 0004, Naiwen Luo, Shuo Yu 0001, Feng Xia 0001
IJCNN3
2023 Web of Conferences: A Conference Knowledge Graph
abstract
Academic conferences have been proven to be significant in facilitating academic activities. To promote information retrieval specific to academic conferences, building complete, systematic, and professional conference knowledge graphs is a crucial task. However, many related systems mainly focus on general knowledge of overall academic information or concentrate services on specific domains. Aiming at filling this gap, this work demonstrates a novel conference knowledge graph, namely Web of Conferences. The system accommodates detailed conference profiles, conference ranking lists, intelligent conference queries, and personalized conference recommendations. Web of Conferences supports detailed conference information retrieval while providing the ranking of conferences based on the most recent data. Conference queries in the system can be implemented via precise search or fuzzy search. Then, according to users' query conditions, personalized conference recommendations are available. Web of Conferences is demonstrated with a user-friendly visualization interface and can be served as a useful information retrieval system for researchers.
Shuo Yu 0001, Ciyuan Peng, Chengchuan Xu, Chen Zhang 0032, Feng Xia 0001
WSDM1
2023 Exploring Public Sentiment During COVID-19: A Cross Country Analysis
abstract
COVID-19 has spread all over the world, accounting for countless death and enormous economic loss. Since the World Health Organization (WHO) declared COVID-19 as a pandemic, governments from different countries have made various policies to prevent the pandemic from becoming worse. However, civilian reactions to the pandemic vary when they face similar situations. This behavioral variation creates a challenge when it comes to policy-making. Such differences are generally implicit, hidden in ones’ social lives. As a result, it is challenging to analyze such differences when the governments make policies. In this work, we investigate social media posts on Twitter and Weibo in order to effectively explore the difference in reactions across various countries, with the aim to understand national differences. To this end, we employ natural language processing (NLP) methods and Linguistic Inquiry and Word Count (LIWC) tools to process six languages in different countries, including the USA, Germany, France, Italy, the U.K., and China. We provide a comprehensive analysis of public reaction differences from the emotional perspective. Our findings verify that the reactions vary noticeably among various countries for some policies. Therefore, sentiment analysis can significantly influence policy-making. Our work sheds light on the mechanism of detecting the reaction differences in various countries, which can be utilized to conduct effective communication and make appropriate policy decisions.
Shuo Yu 0001, Ivan Lee 0001, Mehdi Naseriparsa, Feng Xia 0001
IEEE Trans. Comput. Soc. Syst.1
2023 Spatio-temporal Graph Learning for Epidemic Prediction
abstract
The COVID-19 pandemic has posed great challenges to public health services, government agencies, and policymakers, raising huge social conflicts between public health and economic resilience. Policies such as reopening or closure of business activities are formulated based on scientific projections of infection risks obtained from infection dynamics models. Though most parameters in epidemic prediction service models can be set with domain knowledge of COVID-19, a key parameter, namely, human mobility, is often challenging to estimate due to complex spatio-temporal correlations and social contexts under escalating COVID-19 facilities. Moreover, how to integrate the various implicit features to accurately predict infectious cases is still an open issue. To address this challenge, we formulate the problem as a spatio-temporal network representation problem and propose STEP, a Spatio-Temporal Epidemic Prediction framework, to estimate pandemic infection risk of a city by integrating various real-world conditions (e.g., City Risk Index, climate, and medical conditions) into graph-structured data. We also employ a multi-head attention mechanism in representation learning to extract implicit features for a given city. Extensive experiments have been conducted upon the real-world dataset for 51 states (50 states and Washington, D.C.) of the USA. Experimental results show that STEP can yield more accurate pandemic infection risk estimation than baseline methods. Moreover, STEP outperforms other methods in both short-term and long-term prediction.
Shuo Yu 0001, Feng Xia 0001, Mingliang Hou, Quan Z. Sheng
ACM Trans. Intell. Syst. Technol.1
2022 Familiarity-Based Collaborative Team Recognition in Academic Social Networks
abstract
Collaborative teamwork is key to major scientific discoveries. However, the prevalence of collaboration among researchers makes team recognition increasingly challenging. Previous studies have demonstrated that people are more likely to collaborate with individuals they are familiar with. In this work, we employ the definition of familiarity and then propose faMiliarity-based cOllaborative Team recOgnition (MOTO) algorithm to recognize collaborative teams. MOTO calculates the shortest distance matrix within the global collaboration network and the local density of each node. Central team members are initially recognized based on local density. Then, MOTO recognizes the remaining team members by using the familiarity metric and shortest distance matrix. Extensive experiments have been conducted upon a large-scale dataset. The experimental results show that compared with baseline methods, MOTO can recognize the largest number of teams. The teams recognized by the MOTO possess more cohesive team structures and lower team communication costs compared with other methods. MOTO utilizes familiarity in team recognition to identify cohesive academic teams. The recognized teams are in line with real-world collaborative teamwork patterns. Based on team recognition using MOTO, the research team structure and performance are further analyzed for given time periods. The number of teams that consist of members from different institutions increases gradually. Such teams are found to perform better in comparison with those whose members are from the same institution.
Shuo Yu 0001, Feng Xia 0001, Chen Zhang 0032, Kathleen Keogh, Honglong Chen
IEEE Trans. Comput. Soc. Syst.1
2021 Higher-order Structure Based Anomaly Detection on Attributed Networks
abstract
Anomaly detection (such as telecom fraud detection and medical image detection) has attracted the increasing attention of people. The complex interaction between multiple entities widely exists in the network, which can reflect specific human behavior patterns. Such patterns can be modeled by higher-order network structures, thus benefiting anomaly detection on attributed networks. However, due to the lack of an effective mechanism in most existing graph learning methods, these complex interaction patterns fail to be applied in detecting anomalies, hindering the progress of anomaly detection to some extent. In order to address the aforementioned issue, we present a higher-order structure based anomaly detection (GUIDE) method. We exploit attribute autoencoder and structure autoencoder to reconstruct node attributes and higher-order structures, respectively. Moreover, we design a graph attention layer to evaluate the significance of neighbors to nodes through their higher-order structure differences. Finally, we leverage node attribute and higher-order structure reconstruction errors to find anomalies. Extensive experiments on five real-world datasets (i.e., ACM, Citation, Cora, DBLP, and Pubmed) are implemented to verify the effectiveness of GUIDE. Experimental results in terms of ROC-AUC, PR-AUC, and Recall@K show that GUIDE significantly outperforms the state-of-art methods.
Xu Yuan 0002, Na Zhou, Shuo Yu 0001, Huafei Huang 0001, Zhikui Chen, Feng Xia 0001
IEEE BigData3
2021 An Upstream-Reciprocity-Based Strategy for Academic Social Networks Using Public Goods Game
abstract
Academic social networks (ASNs) have attracted significant attention in recent years as researchers try to understand and improve how research is conducted. Several approaches have been investigated to identify, predict, and recommend scientific collaborators but few have considered to explore a strategy using the game theory. This article investigates the social phenomenon of upstream reciprocity (UR) using a game-theoretical framework. UR occurs when a person who has just received help, in turn, offers help to another. A suitable multiplayer game, the public goods game (PGG), is adopted to model scholarly interactions of coauthorship networks. Experiments are performed on real datasets in which cascades of UR scholars are identified. More importantly, the proposed UR strategy achieves better performance than non-UR scholars as they are found to have a higher publication and citation count. Furthermore, UR behavior is found to replicate throughout the network, which in turn increases the likelihood of others adopting it. Finally, theoretical proof and simulations suggest that UR has the potential to become an evolutionary stable strategy (ESS).
Nakema Deonauth, Mingchu Li, Shuo Yu 0001, Xiangtai Chen
IEEE Trans. Comput. Soc. Syst.3
2021 Data-Driven Decision-Making in COVID-19 Response: A Survey
abstract
COVID-19 has spread all over the world, having an enormous effect on our daily life and work. In response to the epidemic, a lot of important decisions need to be taken to save communities and economies worldwide. Data clearly play a vital role in effective decision-making. Data-driven decision-making uses data-related evidence and insights to guide the decision-making process and verify the plan of action before it is committed. To better handle the epidemic, governments and policy-making institutes have investigated abundant data originating from COVID-19. These data include those related to medicine, knowledge, media, and so on. Based on these data, many prevention and control policies are made. In this survey article, we summarize the progress of data-driven decision-making in the response to COVID-19, including COVID-19 prevention and control, psychological counseling, financial aid, work resumption, and school reopening. We also propose some current challenges and open issues in data-driven decision-making, including data collection and quality, complex data analysis, and fairness in decision-making. This survey article sheds light on current policy-making driven by data, which also provides a feasible direction for further scientific research.
Shuo Yu 0001, Qing Qing, Chen Zhang 0032, Ahsan Shehzad, Giles Oatley, Feng Xia 0001
IEEE Trans. Comput. Soc. Syst.1
2021 Detecting Outlier Patterns With Query-Based Artificially Generated Searching Conditions
abstract
In the age of social computing, finding interesting network patterns or motifs is significant and critical for various areas, such as decision intelligence, intrusion detection, medical diagnosis, social network analysis, fake news identification, and national security. However, subgraph matching remains a computationally challenging problem, let alone identifying special motifs among them. This is especially the case in large heterogeneous real-world networks. In this article, we propose an efficient solution for discovering and ranking human behavior patterns based on network motifs by exploring a user's query in an intelligent way. Our method takes advantage of the semantics provided by a user's query, which in turn provides the mathematical constraint that is crucial for faster detection. We propose an approach to generate query conditions based on the user's query. In particular, we use meta paths between the nodes to define target patterns as well as their similarities, leading to efficient motif discovery and ranking at the same time. The proposed method is examined in a real-world academic network using different similarity measures between the nodes. The experiment result demonstrates that our method can identify interesting motifs and is robust to the choice of similarity measures.
Shuo Yu 0001, Feng Xia 0001, Tao Tang 0007, Xiaoran Yan, Ivan Lee 0001
IEEE Trans. Comput. Soc. Syst.1
2020 Graph Force Learning
abstract
Features representation leverages the great power in network analysis tasks. However, most features are discrete which poses tremendous challenges to effective use. Recently, increasing attention has been paid on network feature learning, which could map discrete features to continued space. Unfortunately, current studies fail to fully preserve the structural information in the feature space due to random negative sampling strategy during training. To tackle this problem, we study the problem of feature learning and novelty propose a force-based graph learning model named GForce inspired by the spring-electrical model. GForce assumes that nodes are in attractive forces and repulsive forces, thus leading to the same representation with the original structural information in feature learning. Comprehensive experiments on three benchmark datasets demonstrate the effectiveness of the proposed framework. Furthermore, GForce opens up opportunities to use physics models to model node interaction for graph learning.
Ke Sun 0011, Jiaying Liu 0006, Shuo Yu 0001, Bo Xu 0008, Feng Xia 0001
IEEE BigData3
2020 OFFER: A Motif Dimensional Framework for Network Representation Learning
abstract
Aiming at better representing multivariate relationships, this paper investigates a motif dimensional framework for higher-order graph learning. The graph learning effectiveness can be improved through OFFER. The proposed framework mainly aims at accelerating and improving higher-order graph learning results. We apply the acceleration procedure from the dimensional of network motifs. Specifically, the refined degree for nodes and edges are conducted in two stages: (1) employ motif degree of nodes to refine the adjacency matrix of the network; and (2) employ motif degree of edges to refine the transition probability matrix in the learning process. In order to assess the efficiency of the proposed framework, four popular network representation algorithms are modified and examined. By evaluating the performance of OFFER, both link prediction results and clustering results demonstrate that the graph representation learning algorithms enhanced with OFFER consistently outperform the original algorithms with higher efficiency.
Shuo Yu 0001, Feng Xia 0001, Zhikui Chen, Ivan Lee 0001
CIKM1
2019 Academic social networks: Modeling, analysis, mining and applications
Xiangjie Kong 0001, Yajie Shi, Shuo Yu 0001, Jiaying Liu 0006, Feng Xia 0001
J. Netw. Comput. Appl.3
2019 Academic Team Formulation Based on Liebig's Barrel: Discovery of Anticask Effect
abstract
Academic team formulation is one of the most critical and fundamental issues in team research. Inspired by the Liebig's metaphor, we formulate an academic team by a barrel composed of planks, namely, Liebig's barrel. We study the capacity of Liebig's barrel from several aspects. Then, we abstract the features in academic teams as those in Liebig's barrel due to the correspondences between team size and plank number, individual member ability and plank height, individual contribution and plank width, allocation of work and plank combination, teamwork attitude and plank tilt angle, team output property, and barrel's content granularity. The investigated model can also be extended to formulate various multifactor objective optimization issues for team science research. In order to verify the rationality of the proposed model, we implement case studies of this model in both the American Physics Society and the Microsoft Academic Graph Computer Science data sets. The experimental results show that the investigated model is effective in academic team formulation. Moreover, an interesting phenomenon is discovered in the proposed model, which we name as the anticask effect that a team's output quality mainly lies on the team member having the maximal research ability rather than those having minimal research ability. We then analyze the underlying reasons for the anticask effect and multiple-factor interaction on academic teams.
Shuo Yu 0001, Feng Xia 0001, Huan Liu 0001
IEEE Trans. Comput. Soc. Syst.1
2019 CSTeller: forecasting scientific collaboration sustainability based on extreme gradient boosting
Wei Wang 0077, Bo Xu 0008, Jiaying Liu 0006, Zixin Cui, Shuo Yu 0001, Xiangjie Kong 0001, Feng Xia 0001
World Wide Web5
2018 Multipath2vec: Predicting Pathogenic Genes via Heterogeneous Network Embedding
Bo Xu 0009, Yu Liu 0035, Shuo Yu 0001, Lei Wang 0005, Hongfei Lin, Jian Wang 0021, Feng Xia 0001
BIBM3
2018 PAVE: Personalized Academic Venue recommendation Exploiting co-publication networks
Shuo Yu 0001, Jiaying Liu 0006, Huizhen Jiang, Amr Tolba, Feng Xia 0001
J. Netw. Comput. Appl.1