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Valerie Obenchain

dblp:148/1104 · DBLP profile ↗
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1ranked-venue papers
1as first author
0since 2021 · last 2014
—ORCID · none

Domains — the database's venue-derived domains; a paper can count in several

Applied, interdisciplinary, general and emerging computing · 1 · 1 first-author

Expertise — from the expertise taxonomy: the topics of the expert's papers under the CCF categories. A weight counts papers with recency: 1 for a paper about the topic, 0.3 when the topic is its context, halved every five years.

Interdisciplinary, comprehensive, and emerging computing
1 paper
Bioinformatics and computational biology · 100%

Topics — the 3 heaviest of 3, each with the papers that count most for it

TopicWeightPapersLastEvidence papers
Bioinformatics and computational biology › genomics
genomic data analysis		 0.212014
VariantAnnotation: a Bioconductor package for exploration and annotation of genetic variants · Bioinform. 2014
Bioinformatics and computational biology › genome annotation
genomic variant annotation		 0.212014
VariantAnnotation: a Bioconductor package for exploration and annotation of genetic variants · Bioinform. 2014
Bioinformatics and computational biology › genomics › genomic variant analysis
variant call format processing		 0.212014
VariantAnnotation: a Bioconductor package for exploration and annotation of genetic variants · Bioinform. 2014
YearPublicationVenuePosition
2014 VariantAnnotation: a Bioconductor package for exploration and annotation of genetic variants
abstract
UNLABELLED: VariantAnnotation is an R / Bioconductor package for the exploration and annotation of genetic variants. Capabilities exist for reading, writing and filtering variant call format (VCF) files. VariantAnnotation allows ready access to additional R / Bioconductor facilities for advanced statistical analysis, data transformation, visualization and integration with diverse genomic resources. AVAILABILITY AND IMPLEMENTATION: This package is implemented in R and available for download at the Bioconductor Web site (http://bioconductor.org/packages/2.13/bioc/html/VariantAnnotation.html). The package contains extensive help pages for individual functions and a 'vignette' outlining typical work flows; it is made available under the open source 'Artistic-2.0' license. Version 1.9.38 was used in this article.
Valerie Obenchain, Michael F. Lawrence, Vincent Carey, Stephanie M. Gogarten, Paul Shannon, Martin Morgan
 Bioinform.1