The outbreak of COVID-19 Disease due to the novel coronavirus has caused a shortage of medical resources. To aid and accelerate the diagnosis process, automatic diagnosis of COVID-19 via deep learning models has recently been explored by researchers across the world. While different data-driven deep learning models have been developed to mitigate the diagnosis of COVID-19, the data itself is still scarce due to patient privacy concerns. Federated Learning (FL) is a natural solution because it allows different organizations to cooperatively learn an effective deep learning model without sharing raw data. However, recent studies show that FL still lacks privacy protection and may cause data leakage. We investigate this challenging problem by proposing a simple yet effective algorithm, named Federated Learning on Medical Datasets using Partial Networks (FLOP), that shares only a partial model between the server and clients. Extensive experiments on benchmark data and real-world healthcare tasks show that our approach achieves comparable or better performance while reducing the privacy and security risks. Of particular interest, we conduct experiments on the COVID-19 dataset and find that our FLOP algorithm can allow different hospitals to collaboratively and effectively train a partially shared model without sharing local patients' data.

We propose a novel graph-driven generative model, that unifies multiple heterogeneous learning tasks into the same framework. The proposed model is based on the fact that heterogeneous learning tasks, which correspond to different generative processes, often rely on data with a shared graph structure. Accordingly, our model combines a graph convolutional network (GCN) with multiple variational autoencoders, thus embedding the nodes of the graph (i.e., samples for the tasks) in a uniform manner, while specializing their organization and usage to different tasks. With a focus on healthcare applications (tasks), including clinical topic modeling, procedure recommendation and admission-type prediction, we demonstrate that our method successfully leverages information across different tasks, boosting performance in all tasks and outperforming existing state-of-the-art approaches.

Jianqiao Li, Chunyuan Li, Guoyin Wang, Hao Fu, Yuhchen Lin, Liqun Chen, Yizhe Zhang, Chenyang Tao, Ruiyi Zhang, Wenlin Wang, Dinghan Shen, Qian Yang, Lawrence Carin. Proceedings of the 2020 Conference on Empirical Methods in Natural Language Processing (EMNLP). 2020.

Dinghan Shen, Pengyu Cheng, Dhanasekar Sundararaman, Xinyuan Zhang, Qian Yang, Meng Tang, Asli Celikyilmaz, Lawrence Carin. Proceedings of the 57th Annual Meeting of the Association for Computational Linguistics. 2019.

Qian Yang, Zhouyuan Huo, Dinghan Shen, Yong Cheng, Wenlin Wang, Guoyin Wang, Lawrence Carin. Proceedings of the 2019 Conference on Empirical Methods in Natural Language Processing and the 9th International Joint Conference on Natural Language Processing (EMNLP-IJCNLP). 2019.

The performance of many network learning applications crucially hinges on the success of network embedding algorithms, which aim to encode rich network information into low-dimensional vertex-based vector representations. This paper considers a novel variational formulation of network embeddings, with special focus on textual networks. Different from most existing methods that optimize a discriminative objective, we introduce Variational Homophilic Embedding (VHE), a fully generative model that learns network embeddings by modeling the semantic (textual) information with a variational autoencoder, while accounting for the structural (topology) information through a novel homophilic prior design. Homophilic vertex embeddings encourage similar embedding vectors for related (connected) vertices. The VHE encourages better generalization for downstream tasks, robustness to incomplete observations, and the ability to generalize to unseen vertices. Extensive experiments on real-world networks, for multiple tasks, demonstrate that the proposed method achieves consistently superior performance relative to competing state-of-the-art approaches.

Language models are essential for natural language processing (NLP) tasks, such as machine translation and text summarization. Remarkable performance has been demonstrated recently across many NLP domains via a Transformer-based language model with over a billion parameters, verifying the benefits of model size. Model parallelism is required if a model is too large to fit in a single computing device. Current methods for model parallelism either suffer from backward locking in backpropagation or are not applicable to language models. We propose the first model-parallel algorithm that speeds the training of Transformer-based language models. We also prove that our proposed algorithm is guaranteed to converge to critical points for non-convex problems. Extensive experiments on Transformer and Transformer-XL language models demonstrate that the proposed algorithm obtains a much faster speedup beyond data parallelism, with comparable or better accuracy. Code to reproduce experiments is to be found at \url{https://github.com/LaraQianYang/Ouroboros}.

Backpropagation algorithm is indispensable for the training of feedforward neural networks. It requires propagating error gradients sequentially from the output layer all the way back to the input layer. The backward locking in backpropagation algorithm constrains us from updating network layers in parallel and fully leveraging the computing resources. Recently, several algorithms have been proposed for breaking the backward locking. However, their performances degrade seriously when networks are deep. In this paper, we propose decoupled parallel backpropagation algorithm for deep learning optimization with convergence guarantee. Firstly, we decouple the backpropagation algorithm using delayed gradients, and show that the backward locking is removed when we split the networks into multiple modules. Then, we utilize decoupled parallel backpropagation in two stochastic methods and prove that our method guarantees convergence to critical points for the non-convex problem. Finally, we perform experiments for training deep convolutional neural networks on benchmark datasets. The experimental results not only confirm our theoretical analysis, but also demonstrate that the proposed method can achieve significant speedup without loss of accuracy.

While recent neural machine translation approaches have delivered state-of-the-art performance for resource-rich language pairs, they suffer from the data scarcity problem for resource-scarce language pairs. Although this problem can be alleviated by exploiting a pivot language to bridge the source and target languages, the source-to-pivot and pivot-to-target translation models are usually independently trained. In this work, we introduce a joint training algorithm for pivot-based neural machine translation. We propose three methods to connect the two models and enable them to interact with each other during training. Experiments on Europarl and WMT corpora show that joint training of source-to-pivot and pivot-to-target models leads to significant improvements over independent training across various languages.

Evaluating the selection of content in a summary is important both for human-written summaries, which can be a useful pedagogical tool for reading and writing skills, and machine-generated summaries, which are increasingly being deployed in information management. The pyramid method assesses a summary by aggregating content units from the summaries of a wise crowd (a form of crowdsourcing). It has proven highly reliable but has largely depended on manual annotation. We propose PEAK, the first method to automatically assess summary content using the pyramid method that also generates the pyramid content models. PEAK relies on open information extraction and graph algorithms. The resulting scores correlate well with manually derived pyramid scores on both human and machine summaries, opening up the possibility of wide-spread use in numerous applications.