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Eve Marder

dblp:26/6741 · DBLP profile ↗
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11ranked-venue papers
2as first author
0since 2021 · last 2013
0000-0001-9632-5448ORCID · verified

Domains — the database's venue-derived domains; a paper can count in several

Artificial intelligence and machine learning · 9 · 2 first-authorApplied, interdisciplinary, general and emerging computing · 2

Expertise — from the expertise taxonomy: the topics of the expert's papers under the CCF categories. A weight counts papers with recency: 1 for a paper about the topic, 0.3 when the topic is its context, halved every five years.

Interdisciplinary, comprehensive, and emerging computing
2 papers
Bioinformatics and computational biology · 77% Computational science and engineering · 23%
Artificial intelligence
2 papers
Probabilistic and Bayesian machine learning · 100%
Theoretical computer science
1 paper
Mathematical optimization · 100%

Topics — the 6 heaviest of 7, each with the papers that count most for it

TopicWeightPapersLastEvidence papers
Machine learning › Probabilistic and Bayesian machine learning › dynamical system › neural dynamics
neural network dynamics
0.011993
Dynamic Modulation of Neurons and Networks · NIPS 1993
Bioinformatics and computational biology
computational neuroscience
0.011990
Order Reduction for Dynamical Systems Describing the Behavior of Complex Neurons · NIPS 1990
Computational science and engineering › numerical analysis
model reduction
0.011990
Order Reduction for Dynamical Systems Describing the Behavior of Complex Neurons · NIPS 1990
Bioinformatics and computational biology › computational neuroscience
neuron model
0.011990
Order Reduction for Dynamical Systems Describing the Behavior of Complex Neurons · NIPS 1990
Mathematical optimization
dynamical systems
0.011990
Order Reduction for Dynamical Systems Describing the Behavior of Complex Neurons · NIPS 1990
Mathematical optimization › numerical analysis
model reduction
0.011990
Order Reduction for Dynamical Systems Describing the Behavior of Complex Neurons · NIPS 1990

Methods — techniques the papers use, named apart from their topics

hybrid circuit · 0.0biological neuron culture · 0.0order reduction · 0.0dynamical systems · 0.0
YearPublicationVenuePosition
2013 Successful Reconstruction of a Physiological Circuit with Known Connectivity from Spiking Activity Alone
abstract
Identifying the structure and dynamics of synaptic interactions between neurons is the first step to understanding neural network dynamics. The presence of synaptic connections is traditionally inferred through the use of targeted stimulation and paired recordings or by post-hoc histology. More recently, causal network inference algorithms have been proposed to deduce connectivity directly from electrophysiological signals, such as extracellularly recorded spiking activity. Usually, these algorithms have not been validated on a neurophysiological data set for which the actual circuitry is known. Recent work has shown that traditional network inference algorithms based on linear models typically fail to identify the correct coupling of a small central pattern generating circuit in the stomatogastric ganglion of the crab Cancer borealis. In this work, we show that point process models of observed spike trains can guide inference of relative connectivity estimates that match the known physiological connectivity of the central pattern generator up to a choice of threshold. We elucidate the necessary steps to derive faithful connectivity estimates from a model that incorporates the spike train nature of the data. We then apply the model to measure changes in the effective connectivity pattern in response to two pharmacological interventions, which affect both intrinsic neural dynamics and synaptic transmission. Our results provide the first successful application of a network inference algorithm to a circuit for which the actual physiological synapses between neurons are known. The point process methodology presented here generalizes well to larger networks and can describe the statistics of neural populations. In general we show that advanced statistical models allow for the characterization of effective network structure, deciphering underlying network dynamics and estimating information-processing capabilities.
Felipe Gerhard, Tilman Kispersky, Gabrielle J. Gutierrez, Eve Marder, Mark A. Kramer, Uri T. Eden
PLoS Comput. Biol.4
2013 The Effects of Temperature on the Stability of a Neuronal Oscillator
abstract
The crab Cancer borealis undergoes large daily fluctuations in environmental temperature (8-24°C) and must maintain appropriate neural function in the face of this perturbation. In the pyloric circuit of the crab stomatogastric ganglion, we pharmacologically isolated the pacemaker kernel (the AB and PD neurons) and characterized its behavior in response to temperature ramps from 7°C to 31°C. For moderate temperatures, the pacemaker displayed a frequency-temperature curve statistically indistinguishable from that of the intact circuit, and like the intact circuit maintained a constant duty cycle. At high temperatures (above 23°C), a variety of different behaviors were seen: in some preparations the pacemaker increased in frequency, in some it slowed, and in many preparations the pacemaker stopped oscillating ("crashed"). Furthermore, these crashes seemed to fall into two qualitatively different classes. Additionally, the animal-to-animal variability in frequency increased at high temperatures. We used a series of Morris-Lecar mathematical models to gain insight into these phenomena. The biophysical components of the final model have temperature sensitivities similar to those found in nature, and can crash via two qualitatively different mechanisms that resemble those observed experimentally. The crash type is determined by the precise parameters of the model at the reference temperature, 11°C, which could explain why some preparations seem to crash in one way and some in another. Furthermore, even models with very similar behavior at the reference temperature diverge greatly at high temperatures, resembling the experimental observations.
Anatoly Rinberg, Adam L. Taylor, Eve Marder
PLoS Comput. Biol.3
2002 Cellular, synaptic and network effects of neuromodulation
Eve Marder, Vatsala Thirumalai
Neural Networks1
2000 Dependence of firing pattern on intrinsic ionic conductances: Sensitive and insensitive combinations
Mark S. Goldman, Jorge Golowasch, Eve Marder, L. F. Abbott
Neurocomputing3
1999 Network Stability from Activity-Dependent Regulation of Neuronal Conductances
abstract
Activity-dependent plasticity appears to play an important role in the modification of neurons and neural circuits that occurs during development and learning. Plasticity is also essential for the maintenance of stable patterns of activity in the face of variable environmental and internal conditions. Previous theoretical and experimental results suggest that neurons stabilize their activity by altering the number or characteristics of ion channels to regulate their intrinsic electrical properties. We present both experimental and modeling evidence to show that activity-dependent regulation of conductances, operating at the level of individual neurons, can also stabilize network activity. These results indicate that the stomatogastric ganglion of the crab can generate a characteristic rhythmic pattern of activity in two fundamentally different modes of operation. In one mode, the rhythm is strictly conditional on the presence of neuromodulatory afferents from adjacent ganglia. In the other, it is independent of neuromodulatory input but relies on newly developed intrinsic properties of the component neurons.
Jorge Golowasch, Michael Casey, L. F. Abbott, Eve Marder
Neural Comput.4
1994 Subharmonic Coordination in Networks of Neurons with Slow Conductances
abstract
We study the properties of a network consisting of two model neurons that are coupled by reciprocal inhibition. The study was motivated by data from a pair of cells in the crustacean stomatogastric ganglion. One of the model neurons is an endogenous burster; the other is excitable but not bursting in the absence of phasic input. We show that the presence of a hyperpolarization activated inward current (i h ) in the excitable neuron allows these neurons to fire in integer subharmonics, with the excitable cell firing once for every N ≥ 1 bursts of the oscillator. The value of N depends on the amount of hyperpolarizing current injected into the excitable cell as well as the voltage activation curve of i h . For a fast synapse, these parameter changes do not affect the characteristic point in the oscillator cycle at which the excitable cell bursts; for slower synapses, such a relationship is maintained within small windows for each N. The network behavior in the current work contrasts with the activity of a pair of coupled oscillators for which the interaction is through phase differences; in the latter case, subharmonics exist if the uncoupled oscillators have near integral frequency relationships, but the phase relationships of the oscillators in general change significantly with parameters. The mechanism of this paper provides a potential means of coordinating subnetworks acting on different time scales but maintaining fixed relationships between characteristic points of the cycles.
Thomas LoFaro, Nancy Kopell, Eve Marder, Scott L. Hooper
Neural Comput.3
1993 Dynamic Modulation of Neurons and Networks
Eve Marder
NIPS1
1992 Hybrid Circuits of Interacting Computer Model and Biological Neurons
Sylvie Renaud, Gwendal Le Masson, Eve Marder, L. F. Abbott
NIPS3
1991 Oscillating Networks: Control of Burst Duration by Electrically Coupled Neurons
abstract
The pyloric network of the stomatogastric ganglion in crustacea is a central pattern generator that can produce the same basic rhythm over a wide frequency range. Three electrically coupled neurons, the anterior burster (AB) neuron and two pyloric dilator (PD) neurons, act as a pacemaker unit for the pyloric network. The functional characteristics of the pacemaker network are the result of electrical coupling between neurons with quite different intrinsic properties, each contributing a basic feature to the complete circuit. The AB neuron, a conditional oscillator, plays a dominant role in rhythm generation. In the work described here, we manipulate the frequency of the AB neuron both isolated and electrically coupled to the PD neurons. Physiological and modeling studies indicate that the PD neurons play an important role in regulating the duration of the bursts produced by the pacemaker unit.
L. F. Abbott, Eve Marder, Scott L. Hooper
Neural Comput.2
1990 Oscillating networks: modeling the pyloric circuit of the stomatogastric ganglion
abstract
A preliminary report is presented on modeling studies of the pyloric circuit of the crustacean stomatogastric ganglion. The goal of this research is to understand how this small network is able to perform the dynamic adjustments needed to maintain a stable rhythmic pattern over a wide range of frequencies and conditions. A discussion is presented of models of individual cell behaviors and the procedure by which they may be reduced to a manageable form. Some indications of how these intrinsic characteristics may interact to produce the full network behavior are presented
L. F. Abbott, Scott L. Hooper, Thomas B. Kepler, Eve Marder
IJCNN4
1990 Order Reduction for Dynamical Systems Describing the Behavior of Complex Neurons
Thomas B. Kepler, L. F. Abbott, Eve Marder
NIPS3