Demo Data from SIGIR 2026 / reviewers in the wild / expert
Derek Greene
dblp:49/4144
· DBLP profile ↗
52ranked-venue papers
11as first author
20since 2021 · last 2026
0000-0001-8065-5418ORCID · verified
Domains — the database's venue-derived domains; a paper can count in several
Databases, data management, data science and information retrieval · 31 · 7 first-author · 11 since 2021Artificial intelligence and machine learning · 30 · 6 first-author · 11 since 2021Applied, interdisciplinary, general and emerging computing · 8 · 3 first-authorGraphics, computer vision, multimedia, augmented reality and games · 4 · 3 since 2021Human-computer interaction and ubiquitous computing · 4 · 2 first-authorSoftware engineering, systems software and programming languages · 1Theory of computation · 1 · 1 since 2021
Expertise — from the expertise taxonomy: the topics of the expert's papers under the CCF categories. A weight counts papers with recency: 1 for a paper about the topic, 0.3 when the topic is its context, halved every five years.
| Artificial intelligence
4 papers |
Trustworthy machine learning · 46% Image recognition and object detection · 42% Transfer learning and domain adaptation · 12% | |
| Databases, data mining, and information retrieval
6 papers |
Information retrieval · 92% Data mining · 7% Knowledge graphs · 1% | |
| Computer graphics and multimedia
1 paper |
Image and video processing · 100% | |
| Human-computer interaction and pervasive computing
1 paper |
Human-AI interaction · 100% |
Topics — the 20 heaviest of 23, each with the papers that count most for it
| Topic | Weight | Papers | Last | Evidence papers |
|---|---|---|---|---|
Information retrieval › evaluation
query performance prediction |
1.8 | 3 | 2023 | A Relative Information Gain-based Query Performance Prediction Framework with Generated Query Variants · ACM Trans. Inf. Syst. 2023 Deep-QPP: A Pairwise Interaction-based Deep Learning Model for Supervised Query Performance Prediction · WSDM 2022 A 'Pointwise-Query, Listwise-Document' based Query Performance Prediction Approach · SIGIR 2022 |
Computer vision › Image recognition and object detection › text recognition
optical character recognition |
1.6 | 2 | 2025 | PreP-OCR: A Complete Pipeline for Document Image Restoration and Enhanced OCR Accuracy · ACL (1) 2025 Effective Synthetic Data and Test-Time Adaptation for OCR Correction · EMNLP 2024 |
Machine learning › Trustworthy machine learning › interpretability
counterfactual explanation |
1.4 | 2 | 2024 | Counterfactual Explanations for Misclassified Images: How Human and Machine Explanations Differ (Abstract Reprint) · AAAI 2024 Counterfactual explanations for misclassified images: How human and machine explanations differ · Artif. Intell. 2023 |
Machine learning › Trustworthy machine learning
interpretability |
1.4 | 2 | 2024 | Counterfactual Explanations for Misclassified Images: How Human and Machine Explanations Differ (Abstract Reprint) · AAAI 2024 Counterfactual explanations for misclassified images: How human and machine explanations differ · Artif. Intell. 2023 |
Information retrieval › evaluation
relevance judgment |
1.0 | 1 | 2026 | MIRA: An LLM-Assisted Benchmark for Multi-Category Integrated Retrieval · SIGIR 2026 |
Image and video processing › image restoration
document image restoration |
0.9 | 1 | 2025 | PreP-OCR: A Complete Pipeline for Document Image Restoration and Enhanced OCR Accuracy · ACL (1) 2025 |
Computer vision › Image recognition and object detection › text recognition › optical character recognition
Post-OCR correction |
0.8 | 1 | 2024 | Effective Synthetic Data and Test-Time Adaptation for OCR Correction · EMNLP 2024 |
Machine learning › Transfer learning and domain adaptation
test-time adaptation |
0.8 | 1 | 2024 | Effective Synthetic Data and Test-Time Adaptation for OCR Correction · EMNLP 2024 |
Information retrieval › evaluation › query performance prediction
neural query performance prediction |
0.6 | 1 | 2022 | A 'Pointwise-Query, Listwise-Document' based Query Performance Prediction Approach · SIGIR 2022 |
Information retrieval › ranking
learning to rank |
0.2 | 1 | 2022 | A 'Pointwise-Query, Listwise-Document' based Query Performance Prediction Approach · SIGIR 2022 |
Information retrieval › retrieval models › neural retrieval
neural ranking model |
0.2 | 1 | 2022 | Deep-QPP: A Pairwise Interaction-based Deep Learning Model for Supervised Query Performance Prediction · WSDM 2022 |
Information retrieval
ranking |
0.2 | 1 | 2022 | Deep-QPP: A Pairwise Interaction-based Deep Learning Model for Supervised Query Performance Prediction · WSDM 2022 |
Data mining › text mining › topic modeling
topic labeling |
0.2 | 1 | 2013 | Unsupervised graph-based topic labelling using dbpedia · WSDM 2013 |
Computational science and engineering › numerical linear algebra
matrix factorization |
0.1 | 1 | 2008 | Ensemble non-negative matrix factorization methods for clustering protein-protein interactions · Bioinform. 2008 |
Bioinformatics and computational biology › protein analysis
protein-protein interaction |
0.1 | 1 | 2008 | Ensemble non-negative matrix factorization methods for clustering protein-protein interactions · Bioinform. 2008 |
Data mining
clustering |
0.1 | 1 | 2006 | Practical solutions to the problem of diagonal dominance in kernel document clustering · ICML 2006 |
Data mining › clustering
document clustering |
0.1 | 1 | 2006 | Practical solutions to the problem of diagonal dominance in kernel document clustering · ICML 2006 |
Data mining › clustering
kernel clustering |
0.1 | 1 | 2006 | Practical solutions to the problem of diagonal dominance in kernel document clustering · ICML 2006 |
Knowledge graphs › semantic web
DBpedia |
0.0 | 1 | 2013 | Unsupervised graph-based topic labelling using dbpedia · WSDM 2013 |
Information retrieval › text analysis
document collection analysis |
0.0 | 1 | 2013 | Unsupervised graph-based topic labelling using dbpedia · WSDM 2013 |
Methods — techniques the papers use, named apart from their topics
user study · 2.2image restoration · 1.7OCR pipeline · 1.7large language model · 1.0synthetic data generation · 0.8self-correction · 0.8noise generation · 0.8relevance model · 0.7query variant generation · 0.7embedded term representation · 0.7counterfactual explanation generation · 0.7pointwise training · 0.6pairwise interaction · 0.6listwise document ranking · 0.6cross-encoder · 0.6convolutional neural network · 0.6concept disambiguation · 0.2hierarchical clustering · 0.1
| Year | Publication | Venue | Position |
|---|---|---|---|
| 2026 | Cultural Analytics for Good: Building Inclusive Evaluation Frameworks for Historical IR
Suchana Datta, Dwaipayan Roy 0001, Derek Greene, Gerardine Meaney, Karen Wade, Philipp Mayr 0001 |
ECIR (3) | 3 |
| 2026 | Evaluating LLM-Driven Summarisation of Parliamentary Debates with Computational ArgumentationabstractUnderstanding how policy is debated and justified in parliament is a fundamental aspect of the democratic process. However, the volume and complexity of such debates mean that outside audiences struggle to engage. Meanwhile, Large Language Models (LLMs) have been shown to enable automated summarisation at scale. While summaries of debates can make parliamentary procedures more accessible, evaluating whether these summaries faithfully communicate argumentative content remains challenging. Existing automated summarisation metrics have been shown to correlate poorly with human judgements of consistency (i.e., faithfulness or alignment between summary and source). In this work, we propose a formal framework for evaluating parliamentary debate summaries that grounds argument structures in the contested proposals up for debate. Our novel approach, driven by computational argumentation, focuses the evaluation on argumentative metrics concerning the faithful preservation of the reasoning presented to justify or oppose policy outcomes. We demonstrate our methods using debates from the European Parliament and associated LLM-driven summaries. Eoghan Cunningham, James P. Cross, Derek Greene, Antonio Rago 0001 |
KR | 3 |
| 2026 | MIRA: An LLM-Assisted Benchmark for Multi-Category Integrated RetrievalabstractUsers increasingly expect modern search systems to offer a unified interface that seamlessly retrieves information from diverse data sources and formats. However, current information retrieval (IR) evaluation benchmarks have not kept pace with this development, primarily due to the lack of test collections that represent the diversity of contemporary search domains. We address this critical gap with MIRA, a novel benchmark based on a large-scale social science search platform. MIRA is designed for category-aware ranking across heterogeneous categories – Publications, Research Data, Variables, and Instruments & Tools – within a single, unified evaluation framework. The proposed collection is distinctive in several ways: (1) it is built upon real user queries, providing a more realistic basis for evaluation; (2) it covers scholarly items from four distinct categories, enabling multi-faceted evaluation; and (3) it leverages a Large Language Model to generate topic descriptions and narratives, as well as for relevance assessment with respect to these topics, substantially reducing the labor and cost of test collection generation. We release this resource to benefit the community by providing a foundational testbed for the research on multi-faceted, category-aware, integrated, or cross-category information retrieval. Mehmet Deniz Türkmen, Suchana Datta, Dwaipayan Roy 0001, Daniel Hienert, Philipp Mayr 0001, Derek Greene |
SIGIR | 6 |
| 2025 | PreP-OCR: A Complete Pipeline for Document Image Restoration and Enhanced OCR AccuracyabstractShuhao Guan, Moule Lin, Cheng Xu, Xinyi Liu, Jinman Zhao, Jiexin Fan, Qi Xu, Derek Greene. Proceedings of the 63rd Annual Meeting of the Association for Computational Linguistics (Volume 1: Long Papers). 2025. Shuhao Guan, Moule Lin, Cheng Xu 0006, Jinman Zhao, Jiexin Fan, Derek Greene |
ACL (1) | 8 |
| 2025 | Tales and Truths: Exploring the Linguistic Journey of 19th Century Literature and Non-fiction
Suchana Datta, Dwaipayan Roy 0001, Derek Greene, Gerardine Meaney |
ECIR (4) | 3 |
| 2025 | Combining Query Performance Predictors: A Reproducibility Study
Sourav Saha 0003, Suchana Datta, Dwaipayan Roy 0001, Mandar Mitra, Derek Greene |
ECIR (4) | 5 |
| 2025 | Topic-Centric Explanations for News RecommendationabstractNews recommender systems (NRS) have been widely applied for online news websites to help users find relevant articles based on their interests. Recent methods have demonstrated considerable success in terms of recommendation performance. However, the lack of explanation for these recommendations can lead to mistrust among users and lack of acceptance of recommendations. To address this issue, we propose a new explainable news model to construct a topic-aware explainable recommendation approach that can both accurately identify relevant articles and explain why they have been recommended, using information from associated topics. Additionally, our model incorporates two coherence metrics applied to assess topic quality, providing a measure of the interpretability of these explanations. The results of our experiments on the MIND (MIcrosoft News Dataset) indicate that the proposed explainable NRS outperforms several other baseline systems, while it is also capable of producing interpretable topics measured by coherence metrics. Furthermore, we present a case study through real-world examples showcasing the usefulness of our NRS for generating explanations. Dairui Liu, Derek Greene, Irene Li, Xuefei Jiang, Ruihai Dong |
Trans. Recomm. Syst. | 2 |
| 2024 | Counterfactual Explanations for Misclassified Images: How Human and Machine Explanations Differ (Abstract Reprint)abstractCounterfactual explanations have emerged as a popular solution for the eXplainable AI (XAI) problem of elucidating the predictions of black-box deep-learning systems because people easily understand them, they apply across different problem domains and seem to be legally compliant. Although over 100 counterfactual methods exist in the XAI literature, each claiming to generate plausible explanations akin to those preferred by people, few of these methods have actually been tested on users (∼7%). Even fewer studies adopt a user-centered perspective; for instance, asking people for their counterfactual explanations to determine their perspective on a “good explanation”. This gap in the literature is addressed here using a novel methodology that (i) gathers human-generated counterfactual explanations for misclassified images, in two user studies and, then, (ii) compares these human-generated explanations to computationally-generated explanations for the same misclassifications. Results indicate that humans do not “minimally edit” images when generating counterfactual explanations. Instead, they make larger, “meaningful” edits that better approximate prototypes in the counterfactual class. An analysis based on “explanation goals” is proposed to account for this divergence between human and machine explanations. The implications of these proposals for future work are discussed. Eoin Delaney, Arjun Pakrashi, Derek Greene, Mark T. Keane |
AAAI | 3 |
| 2024 | RecPrompt: A Self-tuning Prompting Framework for News Recommendation Using Large Language ModelsabstractNews recommendations heavily rely on Natural Language Processing (NLP) methods to analyze, understand, and categorize content, enabling personalized suggestions based on user interests and reading behaviors. Large Language Models (LLMs) like GPT-4 have shown promising performance in understanding natural language. However, the extent of their applicability to news recommendation systems remains to be validated. This paper introduces RecPrompt, the first self-tuning prompting framework for news recommendation, leveraging the capabilities of LLMs to perform complex news recommendation tasks. This framework incorporates a news recommender and a prompt optimizer that applies an iterative bootstrapping process to enhance recommendations through automatic prompt engineering. Extensive experimental results with 400 users show that RecPrompt can achieve an improvement of 3.36% in AUC, 10.49% in MRR, 9.64% in nDCG@5, and 6.20% in nDCG@10 compared to deep neural models. Additionally, we introduce TopicScore, a novel metric to assess explainability by evaluating LLM's ability to summarize topics of interest for users. The results show LLM's effectiveness in accurately identifying topics of interest and delivering comprehensive topic-based explanations. Dairui Liu, Boming Yang, Honghui Du, Derek Greene, Neil J. Hurley, Aonghus Lawlor, Ruihai Dong, Irene Li |
CIKM | 4 |
| 2024 | Synthetically Augmented Self-Supervised Fine-Tuning for Diverse Text OCR CorrectionabstractThe adoption of Optical Character Recognition (OCR) tools has been central to the increased digitization of historical documents. However, the errors introduced during OCR, particularly in texts with a specialized vocabulary (SV), necessitate effective post-OCR correction methodologies. This study introduces a novel approach that leverages weak supervision and self-supervised fine-tuning to enhance post-OCR correction without the need for substantial manual annotations. By using multi-noise-level synthetic data, generated through automatically-extracted OCR errors and applied to clean texts, we can train robust models tailored for post-OCR tasks. Furthermore, we propose a unique self-supervised fine-tuning strategy, applied specifically to long texts, enables models to adeptly handle out-of-vocabulary problems and SV. Additionally, we tested the performance of the GPT model on post-OCR tasks. Shuhao Guan, Derek Greene |
ECAI | 2 |
| 2024 | A Deep Learning Approach for Selective Relevance Feedback
Suchana Datta, Debasis Ganguly, Sean MacAvaney, Derek Greene |
ECIR (2) | 4 |
| 2024 | Effective Synthetic Data and Test-Time Adaptation for OCR CorrectionabstractPost-OCR technology is used to correct errors in the text produced by OCR systems.This study introduces a method for constructing post-OCR synthetic data with different noise levels using weak supervision.We define Character Error Rate (CER) thresholds for "effective" and "ineffective" synthetic data, allowing us to create more useful multi-noise level synthetic datasets.Furthermore, we propose Self-Correct-Noise Test-Time Adaptation (SCN-TTA), which combines self-correction and noise generation mechanisms.SCN-TTA allows a model to dynamically adjust to test data without relying on labels, effectively handling proper nouns in long texts and further reducing CER.In our experiments we evaluate a range of models, including multiple PLMs and LLMs.Results indicate that our method yields models that are effective across diverse text types.Notably, the ByT5 model achieves a CER reduction of 68.67% without relying on manually annotated data 1 . Shuhao Guan, Cheng Xu 0006, Moule Lin, Derek Greene |
EMNLP | 4 |
| 2023 | Handwriting Analysis on the Diaries of Rosamond JacobabstractHandwriting is an art form that most people learn at an early age. Each person’s writing style is unique with small changes as we grow older and as our mood changes. Here we analyse handwritten text in a culturally significant personal diary. We compare changes in handwriting and relate this to the sentiment of the written material and to the topic of diary entries. We identify handwritten text from digitised images and generate a canonical form for words using shape matching to compare how the same handwritten word appears over a period of time. For determining the sentiment of diary entries, we use the Hedonometer, a dictionary-based approach to scoring sentiment. We apply these techniques to the historical diary entries of Rosamond Jacob (1888-1960), an Irish writer and political activist whose daily diary entries report on the major events in Ireland during the first half of the last century. Sharmistha S. Sawant, Saloni D. Thakare, Derek Greene, Gerardine Meaney, Alan F. Smeaton |
CBMI | 3 |
| 2023 | Counterfactual explanations for misclassified images: How human and machine explanations differabstractCounterfactual explanations have emerged as a popular solution for the eXplainable AI (XAI) problem of elucidating the predictions of black-box deep-learning systems because people easily understand them, they apply across different problem domains and seem to be legally compliant. Although over 100 counterfactual methods exist in the XAI literature, each claiming to generate plausible explanations akin to those preferred by people, few of these methods have actually been tested on users (∼7%). Even fewer studies adopt a user-centered perspective; for instance, asking people for their counterfactual explanations to determine their perspective on a “good explanation”. This gap in the literature is addressed here using a novel methodology that (i) gathers human-generated counterfactual explanations for misclassified images, in two user studies and, then, (ii) compares these human-generated explanations to computationally-generated explanations for the same misclassifications. Results indicate that humans do not “minimally edit” images when generating counterfactual explanations. Instead, they make larger, “meaningful” edits that better approximate prototypes in the counterfactual class. An analysis based on “explanation goals” is proposed to account for this divergence between human and machine explanations. The implications of these proposals for future work are discussed. Eoin Delaney, Arjun Pakrashi, Derek Greene, Mark T. Keane |
Artif. Intell. | 3 |
| 2023 | A Relative Information Gain-based Query Performance Prediction Framework with Generated Query VariantsabstractQuery performance prediction (QPP) methods, which aim to predict the performance of a query, often rely on evidences in the form of different characteristic patterns in the distribution of Retrieval Status Values (RSVs). However, for neural IR models, it is usually observed that the RSVs are often less reliable for QPP because they are bounded within short intervals, different from the situation for statistical models. To address this limitation, we propose a model-agnostic QPP framework that gathers additional evidences by leveraging information from the characteristic patterns of RSV distributions computed over a set ofautomatically generatedquery variants, relative to that of the current query. Specifically, the idea behind our proposed method—Weighted Relative Information Gain (WRIG), is that a substantial relative decrease or increase in the standard deviation of the RSVs of the query variants is likely to be a relative indicator of how easy or difficult the original query is. To cater for the absence of human-annotated query variants in real-world scenarios, we further propose an automatic query variant generation method. This can produce variants in a controlled manner by substituting terms from the original query with new ones sampled from a weighted distribution, constructed either via a relevance model or with the help of an embedded representation of query terms. Our experiments on the TREC-Robust, ClueWeb09B, and MS MARCO datasets show that WRIG, by the use of this relative changes in QPP estimate, leads to significantly better results than a state-of-the-art baseline method that leverages information from (manually created) query variants by the application of additive smoothing [ 64 ]. The results also show that our approach can improve the QPP effectiveness of neural retrieval approaches in particular. Suchana Datta, Debasis Ganguly, Mandar Mitra, Derek Greene |
ACM Trans. Inf. Syst. | 4 |
| 2022 | An Analysis of Variations in the Effectiveness of Query Performance Prediction
Debasis Ganguly, Suchana Datta, Mandar Mitra, Derek Greene |
ECIR (1) | 4 |
| 2022 | Forecasting for Sustainable Dairy Produce: Enhanced Long-Term, Milk-Supply Forecasting Using k-NN for Data Augmentation, with Prefactual Explanations for XAI
Eoin Delaney, Derek Greene, Laurence Shalloo, Michael Lynch, Mark T. Keane |
ICCBR | 2 |
| 2022 | A 'Pointwise-Query, Listwise-Document' based Query Performance Prediction ApproachabstractThe task of Query Performance Prediction (QPP) in Information Retrieval (IR) involves predicting the relative effectiveness of a search system for a given input query. Supervised approaches for QPP, such as NeuralQPP are often trained on pairs of queries to capture their relative retrieval performance. However, pointwise approaches, such as the recently proposed BERT-QPP, are generally preferable for efficiency reasons. In this paper, we propose a novel end-to-end neural cross-encoder-based approach that is trained pointwise on individual queries, but listwise over the top ranked documents (split into chunks). In contrast to prior work, the network is then trained to predict the number of relevant documents in each chunk for a given query. Our method is thus a split-n-merge technique that instead of predicting the likely number of relevant documents in the top-k, rather predicts the number of relevant documents for each fixed chunk size p(p Suchana Datta, Sean MacAvaney, Debasis Ganguly, Derek Greene |
SIGIR | 4 |
| 2022 | Deep-QPP: A Pairwise Interaction-based Deep Learning Model for Supervised Query Performance PredictionabstractMotivated by the recent success of end-to-end deep neural models for ranking tasks, we present here a supervised end-to-end neural approach for query performance prediction (QPP). In contrast to unsupervised approaches that rely on various statistics of document score distributions, our approach is entirely data-driven. Further, in contrast to weakly supervised approaches, our method also does not rely on the outputs from different QPP estimators. In particular, our model leverages information from the semantic interactions between the terms of a query and those in the top-documents retrieved with it. The architecture of the model comprises multiple layers of 2D convolution filters followed by a feed-forward layer of parameters. Experiments on standard test collections demonstrate that our proposed supervised approach outperforms other state-of-the-art supervised and unsupervised approaches. Suchana Datta, Debasis Ganguly, Derek Greene, Mandar Mitra |
WSDM | 3 |
| 2021 | Instance-Based Counterfactual Explanations for Time Series Classification
Eoin Delaney, Derek Greene, Mark T. Keane |
ICCBR | 2 |
| 2020 | Ensemble topic modeling using weighted term co-associations
Mark Belford, Derek Greene |
Expert Syst. Appl. | 2 |
| 2019 | EVE: explainable vector based embedding technique using Wikipedia
Muhammad Atif Qureshi 0001, Derek Greene |
J. Intell. Inf. Syst. | 2 |
| 2018 | Introduction to the special issue for the ECML PKDD 2018 journal track
Derek Greene, Björn Bringmann, Élisa Fromont, Jesse Davis |
Data Min. Knowl. Discov. | 1 |
| 2018 | Stability of topic modeling via matrix factorization
Mark Belford, Brian Mac Namee, Derek Greene |
Expert Syst. Appl. | 3 |
| 2018 | Guest editors introduction to the special issue for the ECML PKDD 2018 journal track
Jesse Davis, Björn Bringmann, Élisa Fromont, Derek Greene |
Mach. Learn. | 4 |
| 2017 | TweetCric: A Twitter-Based Accountability Mechanism for Cricket
Arjumand Younus, Muhammad Atif Qureshi 0001, Naif R. Aljohani, Derek Greene, Michael P. O'Mahony |
ICWE | 4 |
| 2017 | Weak Supervision for Semi-supervised Topic Modeling via Word Embeddings
Gerald Conheady, Derek Greene |
LDK | 2 |
| 2017 | Exploring the Role of Gender in 19th Century Fiction Through the Lens of Word Embeddings
Siobhán Grayson, Maria Mulvany, Karen Wade, Gerardine Meaney, Derek Greene |
LDK | 5 |
| 2017 | Lit@EVE: Explainable Recommendation Based on Wikipedia Concept Vectors
Muhammad Atif Qureshi 0001, Derek Greene |
ECML/PKDD (3) | 2 |
| 2016 | Time Series Analysis of VLE Activity Data
Ewa Mlynarska, Padraig Cunningham, Derek Greene |
EDM | 3 |
| 2016 | TwitterCracy: Exploratory Monitoring of Twitter Streams for the 2016 U.S. Presidential Election Cycle
Muhammad Atif Qureshi 0001, Arjumand Younus, Derek Greene |
ECML/PKDD (3) | 3 |
| 2015 | An analysis of the coherence of descriptors in topic modeling
Derek O'Callaghan, Derek Greene, Joe Carthy, Padraig Cunningham |
Expert Syst. Appl. | 2 |
| 2014 | Online social media in the Syria conflict: Encompassing the extremes and the in-betweensabstractThe Syria conflict has been described as the most socially mediated in history, with online social media playing a particularly important role. At the same time, the ever-changing landscape of the conflict leads to difficulties in applying analytical approaches taken by other studies of online political activism. Therefore, in this paper, we use an approach that does not require strong prior assumptions or the proposal of an advance hypothesis to analyze Twitter and YouTube activity of a range of protagonists to the conflict, in an attempt to reveal additional insights into the relationships between them. By means of a network representation that combines multiple data views, we uncover communities of accounts falling into four categories that broadly reflect the situation on the ground in Syria. A detailed analysis of selected communities within the anti-regime categories is provided, focusing on their central actors, preferred online platforms, and activity surrounding “real world” events. Our findings indicate that social media activity in Syria is considerably more convoluted than reported in many other studies of online political activism, suggesting that alternative analytical approaches can play an important role in this type of scenario. Derek O'Callaghan, Nico Prucha, Derek Greene, Maura Conway, Joe Carthy, Padraig Cunningham |
ASONAM | 3 |
| 2014 | How Many Topics? Stability Analysis for Topic Models
Derek Greene, Derek O'Callaghan, Padraig Cunningham |
ECML/PKDD (1) | 1 |
| 2013 | Kanopy: Analysing the Semantic Network around Document Topics
Ioana Hulpus, Conor Hayes, Marcel Karnstedt, Derek Greene, Marek Jozwowicz |
ECML/PKDD (3) | 4 |
| 2013 | Unsupervised graph-based topic labelling using dbpediaabstractAutomated topic labelling brings benefits for users aiming at analysing and understanding document collections, as well as for search engines targetting at the linkage between groups of words and their inherent topics. Current approaches to achieve this suffer in quality, but we argue their performances might be improved by setting the focus on the structure in the data. Building upon research for concept disambiguation and linking to DBpedia, we are taking a novel approach to topic labelling by making use of structured data exposed by DBpedia. We start from the hypothesis that words co-occuring in text likely refer to concepts that belong closely together in the DBpedia graph. Using graph centrality measures, we show that we are able to identify the concepts that best represent the topics. We comparatively evaluate our graph-based approach and the standard text-based approach, on topics extracted from three corpora, based on results gathered in a crowd-sourcing experiment. Our research shows that graph-based analysis of DBpedia can achieve better results for topic labelling in terms of both precision and topic coverage. Ioana Hulpus, Conor Hayes, Marcel Karnstedt, Derek Greene |
WSDM | 4 |
| 2012 | A system for twitter user list curationabstractWith increased adoption of social networking tools, it is becoming more difficult to extract useful information from the mass of data generated daily by users. Curation of content and sources is an important filter in separating the signal from noise. A good set of credible sources often requires painstaking manual curation, which often yields incomplete coverage of a topic. In this demo, we present a recommender system to aid this process, improving the quality and quantity of sources. The system is highly-adaptable to the goals of the curator, enabling some novel uses for curating and monitoring lists of users. Igor Brigadir, Derek Greene, Padraig Cunningham |
RecSys | 2 |
| 2012 | SMS spam filtering: Methods and data
Sarah Jane Delany, Mark Buckley, Derek Greene |
Expert Syst. Appl. | 3 |
| 2011 | Identifying Representative Textual Sources in Blog Networks
Karen Wade, Derek Greene, Conrad Lee, Daniel Archambault, Padraig Cunningham |
ICWSM | 2 |
| 2010 | Tracking the Evolution of Communities in Dynamic Social NetworksabstractReal-world social networks from a variety of domains can naturally be modelled as dynamic graphs. However, approaches to detecting communities have largely focused on identifying communities in static graphs. Recently, researchers have begun to consider the problem of tracking the evolution of groups of users in dynamic scenarios. Here we describe a model for tracking the progress of communities over time in a dynamic network, where each community is characterised by a series of significant evolutionary events. This model is used to motivate a community-matching strategy for efficiently identifying and tracking dynamic communities. Evaluations on synthetic graphs containing embedded events demonstrate that this strategy can successfully track communities over time in volatile networks. In addition, we describe experiments exploring the dynamic communities detected in a real mobile operator network containing millions of users. Derek Greene, Dónal Doyle, Padraig Cunningham |
ASONAM | 1 |
| 2010 | Using Crowdsourcing and Active Learning to Track Sentiment in Online Media
Anthony Brew, Derek Greene, Padraig Cunningham |
ECAI | 2 |
| 2010 | Merging multiple criteria to identify suspicious reviewsabstractAssessing the trustworthiness of reviews is a key issue for the maintainers of opinion sites such as TripAdvisor, given the rewards that can be derived from posting false or biased reviews. In this paper we present a number of criteria that might be indicative of suspicious reviews and evaluate alternative methods for integrating these criteria to produce a unified "suspiciousness" ranking. The criteria derive from characteristics of the network of reviewers and also from analysis of the content and impact of reviews and ratings. The integration methods that are evaluated are singular value decomposition and the unsupervised hedge algorithm. These alternatives are evaluated in a user study on TripAdvisor reviews, where volunteers were asked to rate the suspiciousness of reviews that have been highlighted by the criteria. Derek Greene, Padraig Cunningham |
RecSys | 2 |
| 2010 | Missing value imputation for epistatic MAPsabstractBACKGROUND: Epistatic miniarray profiling (E-MAPs) is a high-throughput approach capable of quantifying aggravating or alleviating genetic interactions between gene pairs. The datasets resulting from E-MAP experiments typically take the form of a symmetric pairwise matrix of interaction scores. These datasets have a significant number of missing values - up to 35% - that can reduce the effectiveness of some data analysis techniques and prevent the use of others. An effective method for imputing interactions would therefore increase the types of possible analysis, as well as increase the potential to identify novel functional interactions between gene pairs. Several methods have been developed to handle missing values in microarray data, but it is unclear how applicable these methods are to E-MAP data because of their pairwise nature and the significantly larger number of missing values. Here we evaluate four alternative imputation strategies, three local (Nearest neighbor-based) and one global (PCA-based), that have been modified to work with symmetric pairwise data. RESULTS: We identify different categories for the missing data based on their underlying cause, and show that values from the largest category can be imputed effectively. We compare local and global imputation approaches across a variety of distinct E-MAP datasets, showing that both are competitive and preferable to filling in with zeros. In addition we show that these methods are effective in an E-MAP from a different species, suggesting that pairwise imputation techniques will be increasingly useful as analogous epistasis mapping techniques are developed in different species. We show that strongly alleviating interactions are significantly more difficult to predict than strongly aggravating interactions. Finally we show that imputed interactions, generated using nearest neighbor methods, are enriched for annotations in the same manner as measured interactions. Therefore our method potentially expands the number of mapped epistatic interactions. In addition we make implementations of our algorithms available for use by other researchers. CONCLUSIONS: We address the problem of missing value imputation for E-MAPs, and suggest the use of symmetric nearest neighbor based approaches as they offer consistently accurate imputations across multiple datasets in a tractable manner. Colm J. Ryan, Derek Greene, Gerard Cagney, Padraig Cunningham |
BMC Bioinform. | 2 |
| 2010 | Partitioning large networks without breaking communities
Anand Narasimhamurthy, Derek Greene, Neil J. Hurley, Padraig Cunningham |
Knowl. Inf. Syst. | 2 |
| 2009 | A Matrix Factorization Approach for Integrating Multiple Data Views
Derek Greene, Padraig Cunningham |
ECML/PKDD (1) | 1 |
| 2008 | Parallel integration of heterogeneous genome-wide data sourcesabstractHeterogeneous genome-wide data sources capture information on various aspects of complex biological systems. For instance, transcriptome, interactome and phenome-level information may be derived from mRNA expression data, protein-protein interaction networks, and biomedical literature corpora. Each source provides a distinct ldquoviewrdquo of the same domain, but potentially encodes different biologically-relevant patterns. Effective integration of such views can provide a richer, more informative model of an organismpsilas functional modules than that produced on a single view alone. Existing machine learning strategies for information fusion largely focus on the production of a consensus model that reflects patterns shared between views. However, the information provided by different views may not always be easily reconciled, due to the incomplete nature of the data, or the fact that some patterns will be present in one view but not in another. To address this problem, we present the Parallel Integration Clustering Algorithm (PICA), a novel cluster analysis approach which supports the simultaneous integration of information from two or more sources. The resulting model preserves patterns that are unique to individual views, as well as those common to all views. We demonstrate the effectiveness of PICA in identifying significant patterns corresponding to functional groupings, when applied to three genome-wide datasets. Derek Greene, Kenneth Bryan, Padraig Cunningham |
BIBE | 1 |
| 2008 | Ensemble non-negative matrix factorization methods for clustering protein-protein interactionsabstractMOTIVATION: When working with large-scale protein interaction data, an important analysis task is the assignment of pairs of proteins to groups that correspond to higher order assemblies. Previously a common approach to this problem has been to apply standard hierarchical clustering methods to identify such a groups. Here we propose a new algorithm for aggregating a diverse collection of matrix factorizations to produce a more informative clustering, which takes the form of a 'soft' hierarchy of clusters. RESULTS: We apply the proposed Ensemble non-negative matrix factorization (NMF) algorithm to a high-quality assembly of binary protein interactions derived from two proteome-wide studies in yeast. Our experimental evaluation demonstrates that the algorithm lends itself to discovering small localized structures in this data, which correspond to known functional groupings of complexes. In addition, we show that the algorithm also supports the assignment of putative functions for previously uncharacterized proteins, for instance the protein YNR024W, which may be an uncharacterized component of the exosome. Derek Greene, Gerard Cagney, Nevan J. Krogan, Padraig Cunningham |
Bioinform. | 1 |
| 2007 | Constraint Selection by Committee: An Ensemble Approach to Identifying Informative Constraints for Semi-supervised Clustering
Derek Greene, Padraig Cunningham |
ECML | 1 |
| 2006 | Efficient Prediction-Based Validation for Document Clustering
Derek Greene, Padraig Cunningham |
ECML | 1 |
| 2006 | Practical solutions to the problem of diagonal dominance in kernel document clusteringabstractIn supervised kernel methods, it has been observed that the performance of the SVM classifier is poor in cases where the diagonal entries of the Gram matrix are large relative to the off-diagonal entries. This problem, referred to as diagonal dominance, often occurs when certain kernel functions are applied to sparse high-dimensional data, such as text corpora. In this paper we investigate the implications of diagonal dominance for unsupervised kernel methods, specifically in the task of document clustering. We propose a selection of strategies for addressing this issue, and evaluate their effectiveness in producing more accurate and stable clusterings. Derek Greene, Padraig Cunningham |
ICML | 1 |
| 2005 | Producing Accurate Interpretable Clusters from High-Dimensional Data
Derek Greene, Padraig Cunningham |
PKDD | 1 |
| 2004 | Ensemble Clustering in Medical DiagnosticsabstractEnsemble techniques have been successfully applied in the context of supervised learning to increase the accuracy and stability of classification. Recently, analogous techniques for cluster analysis have been suggested. Research has demonstrated that, by combining a collection of dissimilar clusterings, an improved solution can be obtained. In this paper, we examine the potential of applying ensemble clustering techniques with a focus on the area of medical diagnostics. We present several ensemble generation and integration strategies, and evaluate each approach on a number of synthetic and real-world datasets. In addition, we show that diversity among ensemble members is necessary, but not sufficient to yield an improved solution without the selection of an appropriate integration method. Derek Greene, Alexey Tsymbal, Nadia Bolshakova, Padraig Cunningham |
CBMS | 1 |