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Derek L. G. Hill

dblp:77/5388 · DBLP profile ↗
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70ranked-venue papers
5as first author
0since 2021 · last 2008
—ORCID · none

Domains — the database's venue-derived domains; a paper can count in several

Applied, interdisciplinary, general and emerging computing · 61 · 3 first-authorGraphics, computer vision, multimedia, augmented reality and games · 38 · 4 first-authorArtificial intelligence and machine learning · 11 · 2 first-authorHuman-computer interaction and ubiquitous computing · 2

Expertise — from the expertise taxonomy: the topics of the expert's papers under the CCF categories. A weight counts papers with recency: 1 for a paper about the topic, 0.3 when the topic is its context, halved every five years.

Artificial intelligence
1 paper
3D vision · 100%
Interdisciplinary, comprehensive, and emerging computing
1 paper
Medical and health informatics · 100%

Topics — the 4 heaviest of 4, each with the papers that count most for it

TopicWeightPapersLastEvidence papers
Computer vision › 3D vision
3d reconstruction
0.012001
Using Photo-Consistency to Register 2D Optical Images of the Human Face to a 3D Surface Model · IEEE Trans. Pattern Anal. Mach. Intell. 2001
Computer vision › 3D vision › geometric estimation
3d registration
0.012001
Using Photo-Consistency to Register 2D Optical Images of the Human Face to a 3D Surface Model · IEEE Trans. Pattern Anal. Mach. Intell. 2001
Computer vision › 3D vision › 3d reconstruction › multi-view stereo
photo-consistency
0.012001
Using Photo-Consistency to Register 2D Optical Images of the Human Face to a 3D Surface Model · IEEE Trans. Pattern Anal. Mach. Intell. 2001
Medical and health informatics
image-guided intervention
0.012001
Using Photo-Consistency to Register 2D Optical Images of the Human Face to a 3D Surface Model · IEEE Trans. Pattern Anal. Mach. Intell. 2001

Methods — techniques the papers use, named apart from their topics

similarity measure · 0.1pose optimization · 0.1lighting model · 0.1
YearPublicationVenuePosition
2008 An Atlas-Based Segmentation Propagation Framework Using Locally Affine Registration - Application to Automatic Whole Heart Segmentation
Xiahai Zhuang, Kawal S. Rhode, Simon R. Arridge, Reza Razavi, Derek L. G. Hill, David J. Hawkes, Sébastien Ourselin
MICCAI (2)5
2007 Accuracy Assessment of Global and Local Atrophy Measurement Techniques with Realistic Simulated Longitudinal Data
Oscar Camara 0001, Rachael I. Scahill, Julia A. Schnabel, William R. Crum, Gerard R. Ridgway, Derek L. G. Hill, Nick C. Fox
MICCAI (2)6
2007 Anisotropic Wave Propagation and Apparent Conductivity Estimation in a Fast Electrophysiological Model: Application to XMR Interventional Imaging
Phani Chinchapatnam, Kawal S. Rhode, Andrew P. King, Gang Gao, YingLiang Ma, Tobias Schaeffter, David J. Hawkes, Reza Razavi, Derek L. G. Hill, Simon R. Arridge, Maxime Sermesant
MICCAI (1)9
2007 A multivariate statistical analysis of the developing human brain in preterm infants
Carlos E. Thomaz, James P. Boardman, Serena J. Counsell, Derek L. G. Hill, Joseph V. Hajnal, A. David Edwards, Mary A. Rutherford, Duncan Fyfe Gillies, Daniel Rueckert
Image Vis. Comput.4
2006 The Challenges of Developing a Collaborative Data and Compute Grid for Neurosciences
abstract
The three-year UK NeuroGrid project aims to develop a Grid-based collaborative research environment to support the data and compute needs for a UK Neurosciences community. This paper describes the challenges in developing this architecture and details initial results from the development of its first prototype to support psychosis, dementia and stroke research and the social challenges of such a collaborative research project. The paper discusses approaches being taken to explore the collaborative science process to inform the requirements for follow on prototypes and methods utilized to develop an effective project team.
John R. Geddes, Clare E. Mackay, Sharon Lloyd, Andrew C. Simpson, David J. Power, Douglas Russell, Mila Katzarova, Martin Rossor, Nick C. Fox, Jonathon Fletcher, Derek L. G. Hill, Kate McLeish, Joseph V. Hajnal, Stephen M. Lawrie, Dominic Job, Andrew M. McIntosh, Joanna M. Wardlaw, Peter Sandercock, Jeb Palmer, Dave Perry, Rob Procter, Jenny Ure, Philip M. Bath, Graham Watson
CBMS11
2006 Simulation of Acquisition Artefacts in MR Scans: Effects on Automatic Measures of Brain Atrophy
Oscar Camara 0001, Beatrix I. Sneller, Gerard R. Ridgway, Ellen Garde, Nick C. Fox, Derek L. G. Hill
MICCAI (1)6
2006 Simulation of Local and Global Atrophy in Alzheimer's Disease Studies
Oscar Camara 0001, Martin Schweiger, Rachael I. Scahill, William R. Crum, Julia A. Schnabel, Derek L. G. Hill, Nick C. Fox
MICCAI (2)6
2006 Cardiac function estimation from MRI using a heart model and data assimilation: Advances and difficulties
Maxime Sermesant, Philippe Moireau, Oscar Camara 0001, Jacques Sainte-Marie, R. Andriantsimiavona, Robert Cimrman, Derek L. G. Hill, Dominique Chapelle, Reza Razavi
Medical Image Anal.7
2006 Phenomenological Model of Diffuse Global and Regional Atrophy Using Finite-Element Methods
abstract
The main goal of this work is the generation of ground-truth data for the validation of atrophy measurement techniques, commonly used in the study of neurodegenerative diseases such as dementia. Several techniques have been used to measure atrophy in cross-sectional and longitudinal studies, but it is extremely difficult to compare their performance since they have been applied to different patient populations. Furthermore, assessment of performance based on phantom measurements or simple scaled images overestimates these techniques' ability to capture the complexity of neurodegeneration of the human brain. We propose a method for atrophy simulation in structural magnetic resonance (MR) images based on finite-element methods. The method produces cohorts of brain images with known change that is physically and clinically plausible, providing data for objective evaluation of atrophy measurement techniques. Atrophy is simulated in different tissue compartments or in different neuroanatomical structures with a phenomenological model. This model of diffuse global and regional atrophy is based on volumetric measurements such as the brain or the hippocampus, from patients with known disease and guided by clinical knowledge of the relative pathological involvement of regions and tissues. The consequent biomechanical readjustment of structures is modelled using conventional physics-based techniques based on biomechanical tissue properties and simulating plausible tissue deformations with finite-element methods. A thermoelastic model of tissue deformation is employed, controlling the rate of progression of atrophy by means of a set of thermal coefficients, each one corresponding to a different type of tissue. Tissue characterization is performed by means of the meshing of a labelled brain atlas, creating a reference volumetric mesh that will be introduced to a finite-element solver to create the simulated deformations. Preliminary work on the simulation of acquisition artefacts is also presented. Cross-sectional and longitudinal sets of simulated data are shown and a visual classification protocol has been used by experts to rate real and simulated scans according to their degree of atrophy. Results confirm the potential of the proposed methodology.
Oscar Camara 0001, Martin Schweiger, Rachael I. Scahill, William R. Crum, Beatrix I. Sneller, Julia A. Schnabel, Gerard R. Ridgway, David M. Cash, Derek L. G. Hill, Nick C. Fox
IEEE Trans. Medical Imaging9
2006 Generalized Overlap Measures for Evaluation and Validation in Medical Image Analysis
abstract
Measures of overlap of labelled regions of images, such as the Dice and Tanimoto coefficients, have been extensively used to evaluate image registration and segmentation algorithms. Modern studies can include multiple labels defined on multiple images yet most evaluation schemes report one overlap per labelled region, simply averaged over multiple images. In this paper, common overlap measures are generalized to measure the total overlap of ensembles of labels defined on multiple test images and account for fractional labels using fuzzy set theory. This framework allows a single "figure-of-merit" to be reported which summarises the results of a complex experiment by image pair, by label or overall. A complementary measure of error, the overlap distance, is defined which captures the spatial extent of the nonoverlapping part and is related to the Hausdorff distance computed on grey level images. The generalized overlap measures are validated on synthetic images for which the overlap can be computed analytically and used as similarity measures in nonrigid registration of three-dimensional magnetic resonance imaging (MRI) brain images. Finally, a pragmatic segmentation ground truth is constructed by registering a magnetic resonance atlas brain to 20 individual scans, and used with the overlap measures to evaluate publicly available brain segmentation algorithms.
William R. Crum, Oscar Camara 0001, Derek L. G. Hill
IEEE Trans. Medical Imaging3
2006 Automatic Quantification of Changes in Bone in Serial MR Images of Joints
abstract
Recent innovations in drug therapies have made it highly desirable to obtain sensitive biomarkers of disease progression that can be used to quantify the performance of candidate disease modifying drugs. In order to measure potential image-based biomarkers of disease progression in an experimental model of rheumatoid arthritis (RA), we present two different methods to automatically quantify changes in a bone in in-vivo serial magnetic resonance (MR) images from the model. Both methods are based on rigid and nonrigid image registration to perform the analysis. The first method uses segmentation propagation to delineate a bone from the serial MR images giving a global measure of temporal changes in bone volume. The second method uses rigid body registration to determine intensity change within a bone, and then maps these into a reference coordinate system using nonrigid registration. This gives a local measure of temporal changes in bone lesion volume. We detected significant temporal changes in local bone lesion volume in five out of eight identified candidate bone lesion regions, and significant difference in local bone lesion volume between male and female subjects in three out of eight candidate bone lesion regions. But the global bone volume was found to be fluctuating over time. Finally, we compare our findings with histology of the subjects and the manual segmentation of bone lesions.
Kelvin K. Leung, Mark Holden, Nadeem Saeed, K. J. Brooks, J. B. Buckton, A. A. Williams, Simon P. Campbell, Kumar Changani, D. G. Reid, Michael Wilde, Daniel Rueckert, Joseph V. Hajnal, Derek L. G. Hill
IEEE Trans. Medical Imaging14
2005 NeuroGrid: Using Grid Technology to Advance Neuroscience
abstract
Large-scale clinical studies in neuro-imaging are hampered by several factors including variances in acquisition techniques, quality assurance and access to remote datasets. The Neurogrid project will build on the experience of other UK e-science projects to assemble a grid infrastructure, and apply this to three exemplar areas: stroke, dementia and psychosis, to conduct collaborative neuroscience research.
John R. Geddes, Sharon Lloyd, Andrew C. Simpson, Martin Rossor, Nick C. Fox, Derek L. G. Hill, Joseph V. Hajnal, Stephen M. Lawrie, Andrew M. McIntosh, Eve C. Johnstone, Joanna M. Wardlaw, Dave Perry, Rob Procter, Philip M. Bath, Edward T. Bullmore
CBMS6
2005 Generalised Overlap Measures for Assessment of Pairwise and Groupwise Image Registration and Segmentation
William R. Crum, Oscar Camara 0001, Daniel Rueckert, Kanwal K. Bhatia, Mark Jenkinson, Derek L. G. Hill
MICCAI6
2005 Inter-breath-hold Registration for the Production of High Resolution Cardiac MR Volumes
Nicholas M. I. Noble, Redha Boubertakh, Reza Razavi, Derek L. G. Hill
MICCAI (2)4
2005 Localization of Abnormal Conduction Pathways for Tachyarrhythmia Treatment Using Tagged MRI
Gerardo I. Sanchez-Ortiz, Maxime Sermesant, Kawal S. Rhode, Raghavendra Chandrashekara, Reza Razavi, Derek L. G. Hill, Daniel Rueckert
MICCAI6
2005 An Inverse Problem Approach to the Estimation of Volume Change
Martin Schweiger, Oscar Camara 0001, William R. Crum, Emma Lewis, Julia A. Schnabel, Simon R. Arridge, Derek L. G. Hill, Nick C. Fox
MICCAI (2)7
2005 A Fast-Marching Approach to Cardiac Electrophysiology Simulation for XMR Interventional Imaging
Maxime Sermesant, Yves Coudière, Valérie Moreau-Villéger, Kawal S. Rhode, Derek L. G. Hill, Reza Razavi
MICCAI (2)5
2005 Tissue deformation and shape models in image-guided interventions: a discussion paper
David J. Hawkes, Dean C. Barratt, Jane M. Blackall, Carolyn S. K. Chan, Philip J. Edwards, Kawal S. Rhode, Graeme P. Penney, Jamie McClelland, Derek L. G. Hill
Medical Image Anal.9
2005 Simulation of cardiac pathologies using an electromechanical biventricular model and XMR interventional imaging
Maxime Sermesant, Kawal S. Rhode, Gerardo I. Sanchez-Ortiz, Oscar Camara 0001, R. Andriantsimiavona, Sanjeet Hegde, Daniel Rueckert, Pier Lambiase, Clifford Bucknall, Eric Rosenthal, Hervé Delingette, Derek L. G. Hill, Nicholas Ayache, Reza Razavi
Medical Image Anal.12
2005 A system for real-time XMR guided cardiovascular intervention
abstract
The hybrid magnetic resonance (MR)/X-ray suite (XMR) is a recently introduced imaging solution that provides new possibilities for guidance of cardiovascular catheterization procedures. We have previously described and validated a technique based on optical tracking to register MR and X-ray images obtained from the sliding table XMR configuration. The aim of our recent work was to extend our technique by providing an improved calibration stage, real-time guidance during cardiovascular catheterization procedures, and further off-line analysis for mapping cardiac electrical data to patient anatomy. Specially designed optical trackers and a dedicated calibration object have resulted in a single calibration step that can be efficiently checked and updated before each procedure. An X-ray distortion model has been implemented that allows for distortion correction for arbitrary c-arm orientations. During procedures, the guidance system provides a real-time combined MR/X-ray image display consisting of live X-ray images with registered recently acquired MR derived anatomy. It is also possible to reconstruct the location of catheters seen during X-ray imaging in the MR derived patient anatomy. We have applied our registration technique to 13 cardiovascular catheterization procedures. Our system has been used for the real-time guidance of ten radiofrequency ablations and one aortic stent implantation. We demonstrate the real-time guidance using two exemplar cases. In a further two cases we show how off-line analysis of registered image data, acquired during electrophysiology study procedures, has been used to map cardiac electrical measurements to patient anatomy for two different types of mapping catheters. The cardiologists that have used the guidance system suggest that real-time XMR guidance could have substantial value in difficult interventional and electrophysiological procedures, potentially reducing procedure time and delivered radiation dose. Also, the ability to map measured electrical data to patient specific anatomy provides improved visualization and a path to investigation of cardiac electromechanical models.
Kawal S. Rhode, Maxime Sermesant, David C. Brogan, Sanjeet Hegde, John H. Hipwell, Pier Lambiase, Eric Rosenthal, Clifford Bucknall, Shakeel A. Qureshi, Jaswinder S. Gill, Reza Razavi, Derek L. G. Hill
IEEE Trans. Medical Imaging12
2004 Multiple Coils for Reduction of Flow Artefacts in MR Images
David Atkinson, David J. Larkman, Philipp G. Batchelor, Derek L. G. Hill, Joseph V. Hajnal
MICCAI (2)4
2004 Multi-channel Mutual Information Using Scale Space
Mark Holden, Lewis D. Griffin, Nadeem Saeed, Derek L. G. Hill
MICCAI (1)4
2004 The Automatic Identification of Hibernating Myocardium
Nicholas M. I. Noble, Derek L. G. Hill, Marcel Breeuwer, Reza Razavi
MICCAI (2)2
2004 Simulation of the Electromechanical Activity of the Heart Using XMR Interventional Imaging
Maxime Sermesant, Kawal S. Rhode, Angela Anjorin, Sanjeet Hegde, Gerardo I. Sanchez-Ortiz, Daniel Rueckert, Pier Lambiase, Clifford Bucknall, Derek L. G. Hill, Reza Razavi
MICCAI (2)9
2004 Using a Maximum Uncertainty LDA-Based Approach to Classify and Analyse MR Brain Images
Carlos E. Thomaz, James P. Boardman, Derek L. G. Hill, Joseph V. Hajnal, David D. Edwards, Mary A. Rutherford, Duncan Fyfe Gillies, Daniel Rueckert
MICCAI (1)3
2003 Application of XMR 2D-3D Registration to Cardiac Interventional Guidance
Kawal S. Rhode, Derek L. G. Hill, Philip J. Edwards, John H. Hipwell, Daniel Rueckert, Gerardo I. Sanchez-Ortiz, Sanjeet Hegde, Vithuran Rahunathan, Reza Razavi
MICCAI (1)2
2003 Measurement and Analysis of Brain Deformation During Neurosurgery
abstract
Recent studies have shown that the surface of the brain is deformed by up to 20 mm after the skull is opened during neurosurgery, which could lead to substantial error in commercial image-guided surgery systems. We quantitatively analyze the intraoperative brain deformation of 24 subjects to investigate whether simple rules can describe or predict the deformation. Interventional magnetic resonance images acquired at the start and end of the procedure are registered nonrigidly to obtain deformation values throughout the brain. Deformation patterns are investigated quantitatively with respect to the location and magnitude of deformation, and to the distribution and principal direction of the displacements. We also measure the volume change of the lateral ventricles by manual segmentation. Our study indicates that brain shift occurs predominantly in the hemisphere ipsi-lateral to the craniotomy, and that there is more brain deformation during resection procedures than during biopsy or functional procedures. However, the brain deformation patterns are extremely complex in this group of subjects. This paper quantitatively demonstrates that brain deformation occurs not only at the surface, but also in deeper brain structure, and that the principal direction of displacement does not always correspond with the direction of gravity. Therefore, simple computational algorithms that utilize limited intraoperative information (e.g., brain surface shift) will not always accurately predict brain deformation at the lesion.
Thomas Hartkens, Derek L. G. Hill, Andy D. Castellano-Smith, David J. Hawkes, Calvin R. Maurer Jr., Alastair J. Martin, Walter A. Hall, Charles L. Truwit
IEEE Trans. Medical Imaging2
2003 Medical Imaging at Guy's Hospital, King's College London
abstract
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David J. Hawkes, Derek L. G. Hill
IEEE Trans. Medical Imaging2
2003 Registration and tracking to integrate x-ray and MR images in an XMR facility
abstract
We describe a registration and tracking technique to integrate cardiac X-ray images and cardiac magnetic resonance (MR) images acquired from a combined X-ray and MR interventional suite (XMR). Optical tracking is used to determine the transformation matrices relating MR image coordinates and X-ray image coordinates. Calibration of X-ray projection geometry and tracking of the X-ray C-arm and table enable three-dimensional (3-D) reconstruction of vessel centerlines and catheters from bi-plane X-ray views. We can, therefore, combine single X-ray projection images with registered projection MR images from a volume acquisition, and we can also display 3-D reconstructions of catheters within a 3-D or multi-slice MR volume. Registration errors were assessed using phantom experiments. Errors in the combined projection images (two-dimensional target registration error--TRE) were found to be 2.4 to 4.2 mm, and the errors in the integrated volume representation (3-D TRE) were found to be 4.6 to 5.1 mm. These errors are clinically acceptable for alignment of images of the great vessels and the chambers of the heart. Results are shown for two patients. The first involves overlay of a catheter used for invasive pressure measurements on an MR volume that provides anatomical context. The second involves overlay of invasive electrode catheters (including a basket catheter) on a tagged MR volume in order to relate electrophysiology to myocardial motion in a patient with an arrhythmia. Visual assessment of these results suggests the errors were of a similar magnitude to those obtained in the phantom measurements.
Kawal S. Rhode, Derek L. G. Hill, Philip J. Edwards, John H. Hipwell, Daniel Rueckert, Gerardo I. Sanchez-Ortiz, Sanjeet Hegde, Vithuran Rahunathan, Reza Razavi
IEEE Trans. Medical Imaging2
2003 Validation of Non-Rigid Image Registration sing Finite Element Methods: Application to Breast MR Images
abstract
This paper presents a novel method for validation of nonrigid medical image registration. This method is based on the simulation of physically plausible, biomechanical tissue deformations using finite-element methods. Applying a range of displacements to finite-element models of different patient anatomies generates model solutions which simulate gold standard deformations. From these solutions, deformed images are generated with a range of deformations typical of those likely to occur in vivo. The registration accuracy with respect to the finite-element simulations is quantified by co-registering the deformed images with the original images and comparing the recovered voxel displacements with the biomechanically simulated ones. The functionality of the validation method is demonstrated for a previously described nonrigid image registration technique based on free-form deformations using B-splines and normalized mutual information as a voxel similarity measure, with an application to contrast-enhanced magnetic resonance mammography image pairs. The exemplar nonrigid registration technique is shown to be of subvoxel accuracy on average for this particular application. The validation method presented here is an important step toward more generic simulations of biomechanically plausible tissue deformations and quantification of tissue motion recovery using nonrigid image registration. It will provide a basis for improving and comparing different nonrigid registration techniques for a diversity of medical applications, such as intrasubject tissue deformation or motion correction in the brain, liver or heart.
Julia A. Schnabel, Christine Tanner, Andy D. Castellano-Smith, Andreas Degenhard, Martin O. Leach, D. Rodney Hose, Derek L. G. Hill, David J. Hawkes
IEEE Trans. Medical Imaging7
2002 Using Points and Surfaces to Improve Voxel-Based Non-rigid Registration
Thomas Hartkens, Derek L. G. Hill, Andy D. Castellano-Smith, David J. Hawkes, Calvin R. Maurer Jr., Alastair J. Martin, Walter A. Hall, Charles L. Truwit
MICCAI (2)2
2002 A Dynamic Brain Atlas
Derek L. G. Hill, Joseph V. Hajnal, Daniel Rueckert, Stephen M. Smith 0001, Thomas Hartkens, Kate McLeish
MICCAI (1)1
2002 Myocardial Delineation via Registration in a Polar Coordinate System
Nicholas M. I. Noble, Derek L. G. Hill, Marcel Breeuwer, Julia A. Schnabel, David J. Hawkes, Frans A. Gerritsen, Reza Razavi
MICCAI (1)2
2002 Validation of Volume-Preserving Non-rigid Registration: Application to Contrast-Enhanced MR-Mammography
Christine Tanner, Julia A. Schnabel, Andreas Degenhard, Andy D. Castellano-Smith, Carmel Hayes, Martin O. Leach, D. Rodney Hose, Derek L. G. Hill, David J. Hawkes
MICCAI (1)8
2002 Measures of Folding Applied to the Development of the Human Fetal Brain
abstract
Previous work has suggested the existence of differences between the cerebral cortex of normal individuals, and those of patients with diseases such as epilepsy and schizophrenia. These shape abnormalities may be of developmental origin. Improved shape measures could provide useful tools for neuroscience research and patient diagnosis. We consider the theoretically desirable properties of measures of brain shape. We have implemented seven measures, three from the neuroscience literature, and four new to this field. Three of the measures are zero-order and four are second-order with respect to the surface. We validate the measures using simple geometrical shapes, and a collection of magnetic resonance scans of ten histologically normal ex vivo fetal brains with gestational ages from 19-42 weeks. We then apply the measures to MR scans from two histologically abnormal ex vivo brains. We demonstrate that our implementation of the measures is sensitive to anatomical variability rather than to the discreteness of the image data. All the measures were sensitive to changes in shape during fetal development. Several of the measures could distinguish between the normal and abnormal fetal brains. We propose a multivariate approach to studying the shape of the cerebral cortex, in which both zero-order and second-order measures are used to quantify folding.
Philipp G. Batchelor, Andy D. Castellano-Smith, Derek L. G. Hill, David J. Hawkes, Tim C. S. Cox, A. F. Dean
IEEE Trans. Medical Imaging3
2002 Quantification of Small Cerebral Ventricular Volume Changes in Treated Growth Hormone Patients using Non-Rigid Registration
abstract
Nonrigid registration can automatically quantify small changes in volume of anatomical structures over time by means of segmentation propagation. Here, we use a nonrigid registration algorithm based on optimising normalized mutual information to quantify small changes in brain ventricle volume in magnetic resonance (MR) images of a group of five patients treated with growth hormone replacement therapy and a control group of six volunteers. The lateral ventricles are segmented from each subject image by registering with the brainweb image which has this structure delineated. The mean (standard deviation) volume change measurements are 1.09 (0.73) cm3 for the patient group and 0.08 (0.62) cm3 for the volunteer group; this difference is statistically significant at the 1% level. We validate our volume measurements by determining the precision from three consecutive scans of five volunteers and also comparing the measurements to previously published volume change estimates obtained by visual inspection of difference images. Results demonstrate a precision of sigma < or = 0.52 cm3 (n = 5) and a rank correlation coefficient with assessed difference images of p = 0.7 (n = 11). To determine the level of shape correspondence we manually segmented subject's ventricles and compared them to the propagations using a voxel overlap similarity index, this gave a mean similarity index of 0.81 (n = 7).
Mark Holden, Julia A. Schnabel, Derek L. G. Hill
IEEE Trans. Medical Imaging3
2002 A Study of the Motion and Deformation of the Heart due to Respiration
abstract
This paper describes a quantitative assessment of respiratory motion of the heart and the construction of a model of respiratory motion. Three-dimensional magnetic resonance scans were acquired on eight normal volunteers and ten patients. The volunteers were imaged at multiple positions in the breathing cycle between full exhalation and full inhalation while holding their breath. The exhalation volume was segmented and used as a template to which the other volumes were registered using an intensity-based rigid registration algorithm followed by nonrigid registration. The patients were imaged at inhale and exhale only. The registration results were validated by visual assessment and consistency measurements indicating subvoxel registration accuracy. For all subjects, we assessed the nonrigid motion of the heart at the right coronary artery, right atrium, and left ventricle. We show that the rigid-body motion of the heart is primarily in the craniocaudal direction with smaller displacements in the right-left and anterior-posterior directions; this is in agreement with previous studies. Deformation was greatest for the free wall of the right atrium and the left ventricle; typical deformations were 3-4 mm with deformations of up to 7 mm observed in some subjects. Using the registration results, landmarks on the template surface were mapped to their correct positions through the breathing cycle. Principal component analysis produced a statistical model of the motion and deformation of the heart. We discuss how this model could be used to assist motion correction.
Kate McLeish, Derek L. G. Hill, David Atkinson, Jane M. Blackall, Reza Razavi
IEEE Trans. Medical Imaging2
2001 Constructing Patient Specific Models for Correcting Intraoperative Brain Deformation
Andy D. Castellano-Smith, Thomas Hartkens, Julia A. Schnabel, D. Rodney Hose, Walter A. Hall, Charles L. Truwit, David J. Hawkes, Derek L. G. Hill
MICCAI9
2001 Quantifying Small Changes in Brain Ventricular Volume Using Non-rigid Registration
Mark Holden, Julia A. Schnabel, Derek L. G. Hill
MICCAI3
2001 A Generic Framework for Non-rigid Registration Based on Non-uniform Multi-level Free-Form Deformations
Julia A. Schnabel, Daniel Rueckert, Marcel Quist, Jane M. Blackall, Andy D. Castellano-Smith, Thomas Hartkens, Graeme P. Penney, Walter A. Hall, Charles L. Truwit, Frans A. Gerritsen, Derek L. G. Hill, David J. Hawkes
MICCAI12
2001 Using Photo-Consistency to Register 2D Optical Images of the Human Face to a 3D Surface Model
abstract
The authors propose a novel method to register two or more optical images to a 3D surface model. The potential applications of such a registration method could be in medicine for example, in image guided interventions, surveillance and identification, industrial inspection, or telemanipulation in remote or hostile environments. Registration is performed by optimizing a similarity measure with respect to the transformation parameters. We propose a novel similarity measure based on "photo-consistency." For each surface point, the similarity measure computes how consistent the corresponding optical image information in each view is with a lighting model. The relative pose of the optical images must be known. We validate the system using data from an optical-based surface reconstruction system and surfaces derived from magnetic resonance (MR) images of the human face. We test the accuracy and robustness of the system with respect to the number of video images, video image noise, errors in surface location and area, and complexity of the matched surfaces. We demonstrate the algorithm working on 10 further optical-based reconstructions of the human head and skin surfaces derived from MR images of the heads of five volunteers. Matching four optical images to a surface model produced a 3D error of between 1.45 and 1.59 mm, at a success rate of 100 percent, where the initial misregistration was up to 16 mm or degrees from the registration position.
Matthew J. Clarkson, Daniel Rueckert, Derek L. G. Hill, David J. Hawkes
IEEE Trans. Pattern Anal. Mach. Intell.3
2000 An Image Registration Approach to Automated Calibration for Freehand 3D Ultrasound
Jane M. Blackall, Daniel Rueckert, Calvin R. Maurer Jr., Graeme P. Penney, Derek L. G. Hill, David J. Hawkes
MICCAI5
2000 Bayesian Estimation of Intra-operative Deformation for Image-Guided Surgery Using 3-D Ultrasound
Andrew P. King, Jane M. Blackall, Graeme P. Penney, Philip J. Edwards, Derek L. G. Hill, David J. Hawkes
MICCAI5
2000 Robust 3D Deformation Field Estimation by Template Propagation
Peter Rösch, Thomas Netsch, Marcel Quist, Graeme P. Penney, Derek L. G. Hill, Jürgen Weese
MICCAI5
2000 Volume and Shape Preservation of Enhancing Lesions when Applying Non-rigid Registration to a Time Series of Contrast Enhancing MR Breast Images
Christine Tanner, Julia A. Schnabel, Daniel Chung, Matthew J. Clarkson, Daniel Rueckert, Derek L. G. Hill, David J. Hawkes
MICCAI6
2000 Design and Evaluation of a System for Microscope-Assisted Guided Interventions (MAGI)
abstract
The problem of providing surgical navigation using image overlays on the operative scene can be split into four main tasks--calibration of the optical system; registration of preoperative images to the patient; system and patient tracking, and display using a suitable visualization scheme. To achieve a convincing result in the magnified microscope view a very high alignment accuracy is required. We have simulated an entire image overlay system to establish the most significant sources of error and improved each of the stages involved. The microscope calibration process has been automated. We have introduced bone-implanted markers for registration and incorporated a locking acrylic dental stent (LADS) for patient tracking. The LADS can also provide a less-invasive registration device with mean target error of 0.7 mm in volunteer experiments. These improvements have significantly increased the alignment accuracy of our overlays. Phantom accuracy is 0.3-0.5 mm and clinical overlay errors were 0.5-1.0 mm on the bone fiducials and 0.5-4 mm on target structures. We have improved the graphical representation of the stereo overlays. The resulting system provides three-dimensional surgical navigation for microscope-assisted guided interventions (MAGI).
Philip J. Edwards, Andrew P. King, Calvin R. Maurer Jr., Darryl A. de Cunha, David J. Hawkes, Derek L. G. Hill, Ronald P. Gaston, Michael R. Fenlon, A. Jusczyzck, Anthony J. Strong, Christopher L. Chandler, Michael J. Gleeson
IEEE Trans. Medical Imaging6
2000 Voxel Similarity Measures for 3D Serial MR Brain Image Registration
abstract
We have evaluated eight different similarity measures used for rigid body registration of serial magnetic resonance (MR) brain scans. To assess their accuracy we used 33 clinical three-dimensional (3-D) serial MR images, with deformable extradural tissue excluded by manual segmentation and simulated 3-D MR images with added intensity distortion. For each measure we determined the consistency of registration transformations for both sets of segmented and unsegmented data. We have shown that of the eight measures tested, the ones based on joint entropy produced the best consistency. In particular, these measures seemed to be least sensitive to the presence of extradural tissue. For these data the difference in accuracy of these joint entropy measures, with or without brain segmentation, was within the threshold of visually detectable change in the difference images.
Mark Holden, Derek L. G. Hill, Erika R. E. Denton, Jo M. Jarosz, Tim C. S. Cox, Torsten Rohlfing, Joanne Goodey, David J. Hawkes
IEEE Trans. Medical Imaging2
1999 Registration of Video Images to Tomographic Images by Optimising Mutual Information Using Texture Mapping
Matthew J. Clarkson, Daniel Rueckert, Andrew P. King, Philip J. Edwards, Derek L. G. Hill, David J. Hawkes
MICCAI5
1999 Design and Evaluation of a System for Microscope-Assisted Guided Interventions (MAGI)
Philip J. Edwards, Andrew P. King, Calvin R. Maurer Jr., Darryl A. de Cunha, David J. Hawkes, Derek L. G. Hill, Ronald P. Gaston, Michael R. Fenlon, Anthony J. Strong, Christopher L. Chandler, Aurelia Richards, Michael J. Gleeson
MICCAI6
1999 Assessment of Intraoperative Brain Deformation Using Interventional MR Imaging
Derek L. G. Hill, Calvin R. Maurer Jr., Alastair J. Martin, Saras Sabanathan, Walter A. Hall, David J. Hawkes, Daniel Rueckert, Charles L. Truwit
MICCAI1
1999 AcouStick: A Tracked A-Mode Ultrasonography System for Registration in Image-Guided Surgery
Calvin R. Maurer Jr., Ronald P. Gaston, Derek L. G. Hill, Michael J. Gleeson, M. Graeme Taylor, Michael R. Fenlon, Philip J. Edwards, David J. Hawkes
MICCAI3
1999 An overlap invariant entropy measure of 3D medical image alignment
Colin Studholme, Derek L. G. Hill, David J. Hawkes
Pattern Recognit.2
1999 Non-rigid Registration Using Free-form Deformations: Application to Breast MR Images
abstract
In this paper we present a new approach for the nonrigid registration of contrast-enhanced breast MRI. A hierarchical transformation model of the motion of the breast has been developed. The global motion of the breast is modeled by an affine transformation while the local breast motion is described by a free-form deformation (FFD) based on B-splines. Normalized mutual information is used as a voxel-based similarity measure which is insensitive to intensity changes as a result of the contrast enhancement. Registration is achieved by minimizing a cost function, which represents a combination of the cost associated with the smoothness of the transformation and the cost associated with the image similarity. The algorithm has been applied to the fully automated registration of three-dimensional (3-D) breast MRI in volunteers and patients. In particular, we have compared the results of the proposed nonrigid registration algorithm to those obtained using rigid and affine registration techniques. The results clearly indicate that the nonrigid registration algorithm is much better able to recover the motion and deformation of the breast than rigid or affine registration algorithms.
Daniel Rueckert, Luke I. Sonoda, Carmel Hayes, Derek L. G. Hill, Martin O. Leach, David J. Hawkes
IEEE Trans. Medical Imaging4
1998 Pitfalls in Comparing Functional Magnetic Resonance Imaging and Invasive Electrophysiology Recordings
Derek L. G. Hill, A. Simmons, Andy D. Castellano-Smith, Calvin R. Maurer Jr., Tim C. S. Cox, R. Elwes, M. F. Brammer, David J. Hawkes, C. E. Polkey
MICCAI1
1998 Measurement of Intraoperative Brain Surface Deformation Under a Craniotomy
Calvin R. Maurer Jr., Derek L. G. Hill, Robert J. Maciunas, John A. Barwise, J. Michael Fitzpatrick, Matthew Y. Wang
MICCAI2
1998 A Comparison of Simularity Measures for use in 2D-3D Medical Image Registration
Graeme P. Penney, Jürgen Weese, John A. Little, Paul Desmedt, Derek L. G. Hill, David J. Hawkes
MICCAI5
1998 A three-component deformation model for image-guided surgery
Philip J. Edwards, Derek L. G. Hill, John A. Little, David J. Hawkes
Medical Image Anal.2
1998 The EASI project-improving the effectiveness and quality of image-guided surgery
abstract
In recent years, advances in computer technology and a significant increase in the accuracy of medical imaging have made it possible to develop systems that can assist the clinician in diagnosis, planning, and treatment. This paper deals with an area that is generally referred to as computer-assisted surgery, image-directed surgery, or image-guided surgery. We report the research, development, and clinical validation performed since January 1996 in the European Applications in Surgical Interventions (EASI) project, which is funded by the European Commission in their "4th Framework Telematics Applications for Health" program. The goal of this project is the improvement of the effectiveness and quality of image-guided neurosurgery of the brain and image-guided vascular surgery of abdominal aortic aneurysms, while at the same time reducing patient risks and overall cost. We have developed advanced prototype systems for preoperative surgical planning and intraoperative surgical navigation, and we have extensively clinically validated these systems. The prototype systems and the clinical validation results are described in this paper.
Marcel Breeuwer, John P. Wadley, H. L. T. de Bliek, Johannes Buurman, Paul Desmedt, Paul M. C. Gieles, Frans A. Gerritsen, Neil L. Dorward, N. D. Kitchen, B. Velani, D. G. T. Thomas, Onno Wink, Jan D. Blankensteijn, Bert C. Eikelboom, W. P. Th. M. Mali, Max A. Viergever, Graeme P. Penney, Ronald P. Gaston, Derek L. G. Hill, Calvin R. Maurer Jr., David J. Hawkes, Frederik Maes, Dirk Vandermeulen, Rudi Verbeeck, Paul Suetens, Georg Schmitz, Thorsten M. Buzug, Cristian Lorenz, Jürgen Sabczynski, Jürgen Weese, W. Zylka, M. H. Kuhn
IEEE Trans. Inf. Technol. Biomed.19
1998 Visual Assessment of the Accuracy of Retrospective Registration of MR and CT Images of the Brain
abstract
In a previous study we demonstrated that automatic retrospective registration algorithms can frequently register magnetic resonance (MR) and computed tomography (CT) images of the brain with an accuracy of better than 2 mm, but in that same study we found that such algorithms sometimes fail, leading to errors of 6 mm or more. Before these algorithms can be used routinely in the clinic, methods must be provided for distinguishing between registration solutions that are clinically satisfactory and those that are not. One approach is to rely on a human observer to inspect the registration results and reject images that have been registered with insufficient accuracy. In this paper, we present a methodology for evaluating the efficacy of the visual assessment of registration accuracy. Since the clinical requirements for level of registration accuracy are likely to be application dependent, we have evaluated the accuracy of the observer's estimate relative to six thresholds: 1-6 mm. The performance of the observers was evaluated relative to the registration solution obtained using external fiducial markers that are screwed into the patient's skull and that are visible in both MR and CT images. This fiducial marker system provides the gold standard for our study. Its accuracy is shown to be approximately 0.5 mm. Two experienced, blinded observers viewed five pairs of clinical MR and CT brain images, each of which had each been misregistered with respect to the gold standard solution. Fourteen misregistrations were assessed for each image pair with misregistration errors distributed between 0 and 10 mm with approximate uniformity. For each misregistered image pair each observer estimated the registration error (in millimeters) at each of five locations distributed around the head using each of three assessment methods. These estimated errors were compared with the errors as measured by the gold standard to determine agreement relative to each of the six thresholds, where agreement means that the two errors lie on the same side of the threshold. The effect of error in the gold standard itself is taken into account in the analysis of the assessment methods. The results were analyzed by means of the Kappa statistic, the agreement rate, and the area of receiver-operating-characteristic (ROC) curves. No assessment performed well at 1 mm, but all methods performed well at 2 mm and higher. For these five thresholds, two methods agreed with the standard at least 80% of the time and exhibited mean ROC areas greater than 0.84. One of these same methods exhibited Kappa statistics that indicated good agreement relative to chance (Kappa > 0.6) between the pooled observers and the standard for these same five thresholds. Further analysis demonstrates that the results depend strongly on the choice of the distribution of misregistration errors presented to the observers.
J. Michael Fitzpatrick, Derek L. G. Hill, Shyr Yu, Jay B. West, Colin Studholme, Calvin R. Maurer Jr.
IEEE Trans. Medical Imaging2
1998 Investigation of intraoperative brain deformation using a 1.5 Tesla interventional MR system: Preliminary results
abstract
All image-guided neurosurgical systems that we are aware of assume that the head and its contents behave as a rigid body. It is important to measure intraoperative brain deformation (brain shift) to provide some indication of the application accuracy of image-guided surgical systems, and also to provide data to develop and validate nonrigid registration algorithms to correct for such deformation. We are collecting data from patients undergoing neurosurgery in a high-field (1.5 T) interventional magnetic resonance (MR) scanner. High-contrast and high-resolution gradient-echo MR image volumes are collected immediately prior to surgery, during surgery, and at the end of surgery, with the patient intubated and lying on the operating table in the operative position. In this paper we report initial results from six patients: one freehand biopsy, one stereotactic functional procedure, and four resections. We investigate intraoperative brain deformation by examining threshold boundary overlays and difference images and by measuring ventricular volume. We also present preliminary results obtained using a nonrigid registration algorithm to quantify deformation. We found that some cases had much greater deformation than others, and also that, regardless of the procedure, there was very little deformation of the midline, the tentorium, the hemisphere contralateral to the procedure, and ipsilateral structures except those that are within 1 cm of the lesion or are gravitationally above the surgical site.
Calvin R. Maurer Jr., Derek L. G. Hill, Alastair J. Martin, M. McCue, Daniel Rueckert, David Lloret, Walter A. Hall, Robert E. Maxwell, David J. Hawkes, Charles L. Truwit
IEEE Trans. Medical Imaging2
1998 A Comparison of Similarity Measures for Use in 2D-3D Medical Image Registration
abstract
A comparison of six similarity measures for use in intensity-based two-dimensional-three-dimensional (2-D-3-D) image registration is presented. The accuracy of the similarity measures are compared to a "gold-standard" registration which has been accurately calculated using fiducial markers. The similarity measures are used to register a computed tomography (CT) scan of a spine phantom to a fluoroscopy image of the phantom. The registration is carried out within a region-of-interest in the fluoroscopy image which is user defined to contain a single vertebra. Many of the problems involved in this type of registration are caused by features which were not modeled by a phantom image alone. More realistic "gold-standard" data sets were simulated using the phantom image with clinical image features overlaid. Results show that the introduction of soft-tissue structures and interventional instruments into the phantom image can have a large effect on the performance of some similarity measures previously applied to 2-D-3-D image registration. Two measures were able to register accurately and robustly even when soft-tissue structures and interventional instruments were present as differences between the images. These measures were pattern intensity and gradient difference. Their registration accuracy, for all the rigid-body parameters except for the source to film translation, was within a root-mean-square (rms) error of 0.54 mm or degrees to the "gold-standard" values. No failures occurred while registering using these measures.
Graeme P. Penney, Jürgen Weese, John A. Little, Paul Desmedt, Derek L. G. Hill, David J. Hawkes
IEEE Trans. Medical Imaging5
1997 Deformations Incorporating Rigid Structures
John A. Little, Derek L. G. Hill, David J. Hawkes
Comput. Vis. Image Underst.2
1997 Voxel-based 2-D/3-D registration of fluoroscopy images and CT scans for image-guided surgery
abstract
Registration of intraoperative fluoroscopy images with preoperative three-dimensional (3-D) CT images can be used for several purposes in image-guided surgery. On the one hand, it can be used to display the position of surgical instruments, which are being tracked by a localizer, in the preoperative CT scan. On the other hand, the registration result can be used to project preoperative planning information or important anatomical structures visible in the CT image onto the fluoroscopy image. For this registration task, a novel voxel-based method in combination with a new similarity measure (pattern intensity) has been developed. The basic concept of the method is explained at the example of two-dimensional (2-D)/3-D registration of a vertebra in an X-ray fluoroscopy image with a 3-D CT image. The registration method is described, and the results for a spine phantom are presented and discussed. Registration has been carried out repeatedly with different starting estimates to study the capture range. Information about registration accuracy has been obtained by comparing the registration results with a highly accurate "ground-truth" registration, which has been derived from fiducial markers attached to the phantom prior to imaging. In addition, registration results for different vertebrae have been compared. The results show that the rotation parameters and the shifts parallel to the projection plane can accurately be determined from a single projection. Because of the projection geometry, the accuracy of the height above the projection plane is significantly lower.
Jürgen Weese, Graeme P. Penney, Paul Desmedt, Thorsten M. Buzug, Derek L. G. Hill, David J. Hawkes
IEEE Trans. Inf. Technol. Biomed.5
1997 Automatic Correction of Motion Artifacts in Magnetic Resonance Images Using an Entropy Focus Criterion
abstract
We present the use of an entropy focus criterion to enable automatic focusing of motion corrupted magnetic resonance images. We demonstrate the principle using illustrative examples from cooperative volunteers. Our technique can determine unknown patient motion or use knowledge of motion from other measures as a starting estimate. The motion estimate is used to compensate the acquired data and is iteratively refined using the image entropy. Entropy focuses the whole image principally by favoring the removal of motion induced ghosts and blurring from otherwise dark regions of the image. Using only the image data, and no special hardware or pulse sequences, we demonstrate correction for arbitrary rigid-body translational motion in the imaging plane and for a single rotation. Extension to three-dimensional (3-D) and more general motion should be possible. The algorithm is able to determine volunteer motion well. The mean absolute deviation between algorithm and navigator-echo-determined motion is comparable to the displacement step size used in the algorithm. Local deviations from the recorded motion or navigator-determined motion are explained and we indicate how enhanced focus criteria may be derived. In all cases we were able to compensate images for patient motion, reducing blurring and ghosting.
David Atkinson, Derek L. G. Hill, Peter N. R. Stoyle, Paul E. Summers, Stephen F. Keevil
IEEE Trans. Medical Imaging2
1996 Automated 3-D registration of MR and CT images of the head
Colin Studholme, Derek L. G. Hill, David J. Hawkes
Medical Image Anal.2
1995 Medical Image Registration Incorporating Deformations
abstract
Multiple sources of 3D medical image data can be used to construct detailed patient representations. Typically registration is achieved assuming the validity of rigid body transformation. In many applications, and in particular when updating representations used for guidance during surgery and therapeutic interventions, this assumption is inappropriate. In this paper we describe a general method for 3D deformation, show how registration can incorporate a composite of rigid body and deformation components and illustrate this methodology on 3 example sets of images. The first is a repeated 3D MR scan of the abdomen of a volunteer who purposely changed position between scans; the second is an MR and CT scan of the head and neck, in which the patient was in a different position for the two scans; and the third is a set of MR and CT images of the head taken before and after epilepsy surgery. Non rigid deformation and composite warping showed significant improvement in registration accuracy in each case. 1
Philip J. Edwards, Derek L. G. Hill, John A. Little, V. A. Sartaj Sahni, David J. Hawkes
BMVC2
1995 Automated 3D Registration of Truncated MR and CT Images of the Head
abstract
This paper presents a fully automated technique for the rigid body registration of clinically acquired MR and CT images of the head. We describe our multiresolution approach to the optimisation of voxel similarity measures and evaluate the performance of a number of measures when presented with clinical images with a small overlapping volume. Results are compared with those derived from manual registration by identification of corresponding point landmarks. We show that by limiting the measures to intra-cranial regions of the images, not containing deformable skin surface features, a greater accuracy may be provided for certain types of truncated image.
Colin Studholme, Derek L. G. Hill, David J. Hawkes
BMVC2
1994 Using Voxel Similarity as a Measure of Medical Image Registration
abstract
In this paper we present our work on using intensity feature spaces to study the relationship between voxel values in registered and unreg-istered medical images. By taking a simple image model we predict structures that we might expect to find in an intensity feature space produced from different modality images of the same scene. We show how this structure will be modified by image noise, misregistration and differing point spread functions of the two modalities. We show examples of such structure in feature spaces created from clinically ac-quired Magnetic Resonance (MR) and Positron Emission Tomography (PET) image data. We show how two simple measures of voxel sim-ilarity based on these feature space observations, a modified variance of intensity ratio and the 3rd order moment of the feature space his-togram, can be used to quantify image misregistration. The 3rd order moment measure is then used with a genetic optimisation algorithm to automatically register pre and post Gadolinium injection MR images. 1
Colin Studholme, Derek L. G. Hill, David J. Hawkes
BMVC2
1994 Medical image registration using knowledge of adjacency of anatomical structures
Derek L. G. Hill, David J. Hawkes
Image Vis. Comput.1
1993 Medical Image Registration Using Knowledge of Adjacency of Anatomical Structures
abstract
Abstract The combination of multimodality medical images is generating increasing clinical interest, but the absence of robust automatic registration algorithms is an obstacle to these techniques entering routine clinical use. In this paper, we present a new algorithm based on surface fitting that makes use of anatomical knowledge of adjacency of identified anatomical structures to solve the 3D rigid body registration problem. The algorithm has been applied to the registration of MR CT and vascular images of the head, and has achieved accuracies similar to those obtained using interactive location of corresponding landmarks.
Derek L. G. Hill, David J. Hawkes
BMVC1