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J. H. Woods

dblp:82/3473 · DBLP profile ↗
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1ranked-venue papers
1as first author
0since 2021 · last 1997
—ORCID · none

Domains — the database's venue-derived domains; a paper can count in several

Applied, interdisciplinary, general and emerging computing · 1 · 1 first-author

Expertise — from the expertise taxonomy: the topics of the expert's papers under the CCF categories. A weight counts papers with recency: 1 for a paper about the topic, 0.3 when the topic is its context, halved every five years.

Interdisciplinary, comprehensive, and emerging computing
1 paper
Bioinformatics and computational biology · 100%

Topics — the 1 heaviest of 1, each with the papers that count most for it

TopicWeightPapersLastEvidence papers
Bioinformatics and computational biology › systems biology › metabolic network analysis
metabolic control analysis
0.011997
Elasticities in Metabolic Control Analysis: algebraic derivation of simplified expressions · Comput. Appl. Biosci. 1997

Methods — techniques the papers use, named apart from their topics

symbolic computation · 0.0algebraic derivation · 0.0
YearPublicationVenuePosition
1997 Elasticities in Metabolic Control Analysis: algebraic derivation of simplified expressions
abstract
Metabolic Control Analysis is one of many disciplines that make use of scaled derivatives. In particular, ‘elasticities’ are used to quantify the effect of an effector or substrate concentration on an enzyme rate under locally specified conditions. Normally an algebraic expression for the elasticity of an enzyme is obtained by differentiating its rate law, multiplying by the effector concentration and dividing by the rate law itself: this results in considerable expression expansion, and when the results are subsequently simplified it is often at the expense of biological comprehensibility. We present a novel algorithm which not only circumvents the expression expansion, but preserves an elegant separation of the components in enzyme behaviour. Easily implemented, and producing gains in both performance and numerical precision, the algorithm is potentially applicable to a number of existing packages. It also greatly assists the manual derivation and evaluation of elasticities, allowing the elasticity of even quite complex enzyme systems to be written by inspection. The authors hereby place the algorithm in the public domain. SCAMP, complete with the new parser described here, is available at the bionet.metabolic-reg ftp site ftp://bmsdarwin.brookes.ac.uk. ANSI C code for the parser is available from the authors. E-mail: [email protected] (http://www.brookes.ac.uk/schools/bms/research/biochemi/fell.html); [email protected] (http://www.fssc.demon.co.uk)
J. H. Woods, Herbert M. Sauro
Comput. Appl. Biosci.1