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Anthony D. Fox

dblp:86/5572 · DBLP profile ↗
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4ranked-venue papers
1as first author
0since 2021 · last 2016
—ORCID · none

Domains — the database's venue-derived domains; a paper can count in several

Artificial intelligence and machine learning · 2 · 1 first-authorSystems, architecture and hardware · 2Databases, data management, data science and information retrieval · 2 · 1 first-authorApplied, interdisciplinary, general and emerging computing · 2 · 1 first-author

Expertise — from the expertise taxonomy: the topics of the expert's papers under the CCF categories. A weight counts papers with recency: 1 for a paper about the topic, 0.3 when the topic is its context, halved every five years.

Interdisciplinary, comprehensive, and emerging computing
1 paper
Bioinformatics and computational biology · 100%
Computer architecture, parallel and distributed computing, and storage systems
1 paper
Distributed systems · 100%

Topics — the 3 heaviest of 3, each with the papers that count most for it

TopicWeightPapersLastEvidence papers
Bioinformatics and computational biology › protein structure prediction › protein folding
protein folding simulation
0.012001
Studying Protein Folding on the Grid: Experiences Using CHARMM on NPACI Resources under Legion · HPDC 2001
Distributed systems
distributed resource management
0.012001
Studying Protein Folding on the Grid: Experiences Using CHARMM on NPACI Resources under Legion · HPDC 2001
Distributed systems
grid computing
0.012001
Studying Protein Folding on the Grid: Experiences Using CHARMM on NPACI Resources under Legion · HPDC 2001
YearPublicationVenuePosition
2016 An experimental study of big spatial data systems
abstract
With the rise of location-aware IoT devices, there is an increased desire to process and manage the stationary and moving trajectory data generated by these real-time sensors. There has been a corresponding evolution of distributed database and compute technology to handle the increasing data load. Here we describe challenges in managing this kind of data and survey the technologies that address those challenges. We evaluate two distributed database technologies against a simulated high volume sensor data source and discuss the performance of predominant moving trajectory access patterns.
Andrew Hulbert, Thomas Kunicki, James N. Hughes, Anthony D. Fox, Christopher N. Eichelberger
IEEE BigData4
2013 Spatio-temporal indexing in non-relational distributed databases
abstract
Big Data has driven the need for datastores that can scale horizontally leading to the development of many different NoSQL database implementations, each with different persistence and query philosophies. Spatio-temporal data such as location data is one of the largest types of data being collected today. We describe a novel spatio-temporal index structure that leverages the horizontal scalability of NoSQL databases to achieve performant query and transformation semantics. We present performance characteristics gathered from testing with Accumulo.
Anthony D. Fox, Christopher N. Eichelberger, James N. Hughes, Skylar Lyon
IEEE BigData1
2004 Studying protein folding on the Grid: experiences using CHARMM on NPACI resources under Legion
abstract
Abstract One benefit of a computational Grid is the ability to run high‐performance applications over distributed resources simply and securely. We demonstrated this benefit with an experiment in which we studied the protein‐folding process with the CHARMM molecular simulation package over a Grid managed by Legion, a Grid operating system. High‐performance applications can take advantage of Grid resources if the Grid operating system provides both low‐level functionality as well as high‐level services. We describe the nature of services provided by Legion for high‐performance applications. Our experiences indicate that human factors continue to play a crucial role in the configuration of Grid resources, underlying resources can be problematic, Grid services must tolerate underlying problems or inform the user, and high‐level services must continue to evolve to meet user requirements. Our experiment not only helped a scientist perform an important study, but also showed the viability of an integrated approach such as Legion's for managing a Grid. Copyright © 2004 John Wiley & Sons, Ltd.
Anand Natrajan, Michael F. Crowley, Nancy Wilkins-Diehr, Marty Humphrey, Anthony D. Fox, Andrew S. Grimshaw, Charles L. Brooks III
Concurr. Comput. Pract. Exp.5
2001 Studying Protein Folding on the Grid: Experiences Using CHARMM on NPACI Resources under Legion
abstract
One benefit of a computational grid is the ability to run high-performance applications over distributed resources simply and securely. We demonstrate this benefit with an experiment in which we studied the protein folding process with the CHARMM molecular simulation package over a grid managed by Legion, a grid operating system. High-performance applications can take advantage of grid resources if the grid operating system provides both low level functionality as well as high-level services. We describe the nature of services provided by Legion for high-performance applications. Our experiences indicate that human factors continue to play a crucial role in the configuration of grid resources, underlying resources can be problematic, grid services must tolerate underlying problems or inform the user, and high-level services must continue to evolve to meet user requirements. Our experiment not only helped a scientist perform an important study, but also showed the viability of an integrated approach such as Legion's for managing a grid.
Anand Natrajan, Anthony D. Fox, Marty Humphrey, Andrew S. Grimshaw, Nancy Wilkins-Diehr, Michael F. Crowley, Charles L. Brooks III
HPDC2