Satoshi Kasai

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10ranked-venue papers
0as first author
9since 2021 · last 2026
0009-0004-0067-1442ORCID · corroborated

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Applied, interdisciplinary, general and emerging computing · 10 · 9 since 2021
YearPublicationVenuePosition
2026 Comparative validation of surgical phase recognition, instrument keypoint estimation, and instrument instance segmentation in endoscopy: Results of the PhaKIR 2024 challenge
abstract
Reliable recognition and localization of surgical instruments in endoscopic video recordings are foundational for a wide range of applications in computer- and robot-assisted minimally invasive surgery (RAMIS), including surgical training, skill assessment, and autonomous assistance. However, robust performance under real-world conditions remains a significant challenge. Incorporating surgical context - such as the current procedural phase - has emerged as a promising strategy to improve robustness and interpretability. To address these challenges, we organized the Surgical Procedure Phase, Keypoint, and Instrument Recognition (PhaKIR) sub-challenge as part of the Endoscopic Vision (EndoVis) challenge at MICCAI 2024. We introduced a novel, multi-center dataset comprising thirteen full-length laparoscopic cholecystectomy videos collected from three distinct medical institutions, with unified annotations for three interrelated tasks: surgical phase recognition, instrument keypoint estimation, and instrument instance segmentation. Unlike existing datasets, ours enables joint investigation of instrument localization and procedural context within the same data while supporting the integration of temporal information across entire procedures. We report results and findings in accordance with the BIAS guidelines for biomedical image analysis challenges. The PhaKIR sub-challenge advances the field by providing a unique benchmark for developing temporally aware, context-driven methods in RAMIS and offers a high-quality resource to support future research in surgical scene understanding.
Tobias Rueckert, David Rauber, Raphaela Maerkl, Leonard Klausmann, Suemeyye R. Yildiran, Max Gutbrod, Danilo Weber Nunes, Alvaro Fernandez Moreno, Imanol Luengo, Danail Stoyanov, Nicolas Toussaint, Enki Cho, Hyeon Bae Kim, Oh Sung Choo, Ka Young Kim, Seong Tae Kim 0001, Gonçalo Arantes, Kehan Song, Junchen Xiong, Tingyi Lin, Shunsuke Kikuchi, Hiroki Matsuzaki, Atsushi Kouno, João Renato Ribeiro Manesco, João Paulo Papa, Tae-Min Choi, Tae Kyeong Jeong, Oluwatosin Alabi, Tom Vercauteren, Runzhi Wu, Mengya Xu, An Wang 0007, Long Bai 0008, Hongliang Ren 0001, Amine Yamlahi, Jakob Hennighausen, Lena Maier-Hein, Satoshi Kondo, Satoshi Kasai, Kousuke Hirasawa, Shu Yang 0004, Yihui Wang 0002, Hao Chen 0011, Santiago Rodríguez, Nicolás Aparicio, Leonardo Manrique, Juan Camilo Lyons, Olivia Hosie, Nicolás Ayobi, Pablo Andrés Arbeláez, Yiping Li 0002, Yasmina Alkhalil, Sahar Nasirihaghighi, Stefanie Speidel, Daniel Rueckert, Hubertus Feußner, Dirk Wilhelm, Christoph Palm
Medical Image Anal.42
2025 PitVis-2023 challenge: Workflow recognition in videos of endoscopic pituitary surgery
abstract
The field of computer vision applied to videos of minimally invasive surgery is ever-growing. Workflow recognition pertains to the automated recognition of various aspects of a surgery, including: which surgical steps are performed; and which surgical instruments are used. This information can later be used to assist clinicians when learning the surgery or during live surgery. The Pituitary Vision (PitVis) 2023 Challenge tasks the community to step and instrument recognition in videos of endoscopic pituitary surgery. This is a particularly challenging task when compared to other minimally invasive surgeries due to: the smaller working space, which limits and distorts vision; and higher frequency of instrument and step switching, which requires more precise model predictions. Participants were provided with 25-videos, with results presented at the MICCAI-2023 conference as part of the Endoscopic Vision 2023 Challenge in Vancouver, Canada, on 08-Oct-2023. There were 18-submissions from 9-teams across 6-countries, using a variety of deep learning models. The top performing model for step recognition utilised a transformer based architecture, uniquely using an autoregressive decoder with a positional encoding input. The top performing model for instrument recognition utilised a spatial encoder followed by a temporal encoder, which uniquely used a 2-layer temporal architecture. In both cases, these models outperformed purely spatial based models, illustrating the importance of sequential and temporal information. This PitVis-2023 therefore demonstrates state-of-the-art computer vision models in minimally invasive surgery are transferable to a new dataset. Benchmark results are provided in the paper, and the dataset is publicly available at: https://doi.org/10.5522/04/26531686.
Adrito Das, Danyal Z. Khan, Dimitris Psychogyios, John G. Hanrahan, Francisco Vasconcelos 0001, You Pang, Zhen Chen 0018, Jinlin Wu, Xiaoyang Zou, Guoyan Zheng, Abdul Qayyum 0002, Moona Mazher, Muhammad Imran Razzak, Tianbin Li, Jin Ye 0002, Junjun He, Szymon Plotka, Joanna Kaleta, Amine Yamlahi, Antoine Jund, Patrick Godau, Satoshi Kondo, Satoshi Kasai, Kousuke Hirasawa, Dominik Rivoir, Stefanie Speidel, Alejandra Pérez, Santiago Rodríguez, Pablo Andrés Arbeláez, Danail Stoyanov, Hani J. Marcus, Sophia Bano
Medical Image Anal.24
2025 ACOUSLIC-AI challenge report: Fetal abdominal circumference measurement on blind-sweep ultrasound data from low-income countries
abstract
Fetal growth restriction, affecting up to 10% of pregnancies, is a critical factor contributing to perinatal mortality and morbidity. Ultrasound measurements of the fetal abdominal circumference (AC) are a key aspect of monitoring fetal growth. However, the routine practice of biometric obstetric ultrasounds is limited in low-resource settings due to the high cost of sonography equipment and the scarcity of trained sonographers. To address this issue, we organized the ACOUSLIC-AI (Abdominal Circumference Operator-agnostic UltraSound measurement in Low-Income Countries) challenge to investigate the feasibility of automatically estimating fetal AC from blind-sweep ultrasound scans acquired by novice operators using low-cost devices. Training data, collected from three Public Health Units (PHUs) in Sierra Leone are made publicly available. Private validation and test sets, containing data from two PHUs in Tanzania and a European hospital, are provided through the Grand-Challenge platform. All sets were annotated by experienced readers. Sixteen international teams participated in this challenge, with six teams submitting to the Final Test Phase. In this article, we present the results of the three top-performing AI models from the ACOUSLIC-AI challenge, which are publicly accessible. We evaluate their performance in fetal abdomen frame selection, segmentation, abdominal circumference measurement, and compare their performance against clinical standards for fetal AC measurement. Clinical comparisons demonstrated that the limits of agreement (LoA) for A2 in fetal AC measurements are comparable to the interobserver LoA reported in the literature. The algorithms developed as part of the ACOUSLIC-AI challenge provide a benchmark for future algorithms on the selection and segmentation of fetal abdomen frames to further minimize fetal abdominal circumference measurement variability.
María Sofía Sappia, Chris L. de Korte, Bram van Ginneken, Dean Ninalga, Satoshi Kondo, Satoshi Kasai, Kousuke Hirasawa, Tanya Akumu, Carlos Martín-Isla, Karim Lekadir, Víctor M. Campello, Jorge Fabila, Anette Beverdam, Jeroen van Dillen, Chase Neff, Keelin Murphy
Medical Image Anal.6
2024 Domain generalization across tumor types, laboratories, and species - Insights from the 2022 edition of the Mitosis Domain Generalization Challenge
Marc Aubreville, Nikolas Stathonikos, Taryn A. Donovan, Robert Klopfleisch, Jonas Ammeling, Jonathan Ganz, Frauke Wilm, Mitko Veta, Samir Jabari, Markus Eckstein, Jonas Annuscheit, Christian Krumnow, Engin Bozaba, Sercan Cayir, Hongyan Gu, Xiang 'Anthony' Chen, Mostafa Jahanifar, Adam J. Shephard, Satoshi Kondo, Satoshi Kasai, Sujatha Kotte, Vangala Saipradeep, Maxime W. Lafarge, Viktor H. Koelzer, Ziyue Wang 0005, Yongbing Zhang 0002, Sen Yang 0006, Katharina Breininger, Christof Bertram
Medical Image Anal.20
2024 Generating synthetic computed tomography for radiotherapy: SynthRAD2023 challenge report
abstract
Radiation therapy plays a crucial role in cancer treatment, necessitating precise delivery of radiation to tumors while sparing healthy tissues over multiple days. Computed tomography (CT) is integral for treatment planning, offering electron density data crucial for accurate dose calculations. However, accurately representing patient anatomy is challenging, especially in adaptive radiotherapy, where CT is not acquired daily. Magnetic resonance imaging (MRI) provides superior soft-tissue contrast. Still, it lacks electron density information, while cone beam CT (CBCT) lacks direct electron density calibration and is mainly used for patient positioning. Adopting MRI-only or CBCT-based adaptive radiotherapy eliminates the need for CT planning but presents challenges. Synthetic CT (sCT) generation techniques aim to address these challenges by using image synthesis to bridge the gap between MRI, CBCT, and CT. The SynthRAD2023 challenge was organized to compare synthetic CT generation methods using multi-center ground truth data from 1080 patients, divided into two tasks: (1) MRI-to-CT and (2) CBCT-to-CT. The evaluation included image similarity and dose-based metrics from proton and photon plans. The challenge attracted significant participation, with 617 registrations and 22/17 valid submissions for tasks 1/2. Top-performing teams achieved high structural similarity indices (≥0.87/0.90) and gamma pass rates for photon (≥98.1%/99.0%) and proton (≥97.3%/97.0%) plans. However, no significant correlation was found between image similarity metrics and dose accuracy, emphasizing the need for dose evaluation when assessing the clinical applicability of sCT. SynthRAD2023 facilitated the investigation and benchmarking of sCT generation techniques, providing insights for developing MRI-only and CBCT-based adaptive radiotherapy. It showcased the growing capacity of deep learning to produce high-quality sCT, reducing reliance on conventional CT for treatment planning.
Evi M. C. Huijben, Maarten L. Terpstra, Arthur Jr Galapon, Suraj Pai, Adrian Thummerer, Peter J. Koopmans, Manya Afonso, Maureen van Eijnatten, Oliver J. Gurney-Champion, Zeli Chen, Kaiyi Zheng, Chuanpu Li, Haowen Pang, Chuyang Ye, Runqi Wang, Fuxin Fan, Jingna Qiu, Yixing Huang, Juhyung Ha, Jong Sung Park, Alexandra Alain-Beaudoin, Silvain Bériault, Pengxin Yu, Zhanyao Huang, Gengwan Li, Xueru Zhang, Yubo Fan, Bowen Xin, Aaron Nicolson, Lujia Zhong, Zhiwei Deng, Gustav Mueller-Franzes, Firas Khader, Xia Li 0005, Ye Zhang 0039, Cédric Hémon, Valentin Boussot, Shaobin Wang, Derk Mus, Bram Kooiman, Chelsea A. H. Sargeant, Edward G. A. Henderson, Satoshi Kondo, Satoshi Kasai, Reza Karimzadeh, Bulat Ibragimov, Thomas Helfer, Jessica Dafflon, Enpei Wang, Zoltán Perkó, Matteo Maspero
Medical Image Anal.51
2024 The ACROBAT 2022 challenge: Automatic registration of breast cancer tissue
abstract
The alignment of tissue between histopathological whole-slide-images (WSI) is crucial for research and clinical applications. Advances in computing, deep learning, and availability of large WSI datasets have revolutionised WSI analysis. Therefore, the current state-of-the-art in WSI registration is unclear. To address this, we conducted the ACROBAT challenge, based on the largest WSI registration dataset to date, including 4,212 WSIs from 1,152 breast cancer patients. The challenge objective was to align WSIs of tissue that was stained with routine diagnostic immunohistochemistry to its H&E-stained counterpart. We compare the performance of eight WSI registration algorithms, including an investigation of the impact of different WSI properties and clinical covariates. We find that conceptually distinct WSI registration methods can lead to highly accurate registration performances and identify covariates that impact performances across methods. These results provide a comparison of the performance of current WSI registration methods and guide researchers in selecting and developing methods.
Philippe Weitz, Masi Valkonen, Leslie Solorzano, Circe Carr, Kimmo Kartasalo, Constance Boissin, Sonja Koivukoski, Aino Kuusela, Dusan Rasic, Yanbo Feng, Sandra Kristiane Sinius Pouplier, Kajsa Ledesma Eriksson, Stephanie Robertson, Christian Marzahl, Chandler Gatenbee, Alexander R. A. Anderson, Marek Wodzinski, Artur Jurgas, Niccolò Marini, Manfredo Atzori, Henning Müller, Daniel Budelmann, Nick Weiss, Stefan Heldmann, Johannes Lotz 0002, Jelmer M. Wolterink, Bruno De Santi, Abhijeet Patil, Amit Sethi, Satoshi Kondo, Satoshi Kasai, Kousuke Hirasawa, Mahtab Farrokh, Neeraj Kumar 0002, Russell Greiner, Leena Latonen, Anne-Vibeke Laenkholm, Johan Hartman, Pekka Ruusuvuori, Mattias Rantalainen
Medical Image Anal.32
2024 AIROGS: Artificial Intelligence for Robust Glaucoma Screening Challenge
abstract
The early detection of glaucoma is essential in preventing visual impairment. Artificial intelligence (AI) can be used to analyze color fundus photographs (CFPs) in a cost-effective manner, making glaucoma screening more accessible. While AI models for glaucoma screening from CFPs have shown promising results in laboratory settings, their performance decreases significantly in real-world scenarios due to the presence of out-of-distribution and low-quality images. To address this issue, we propose the Artificial Intelligence for Robust Glaucoma Screening (AIROGS) challenge. This challenge includes a large dataset of around 113,000 images from about 60,000 patients and 500 different screening centers, and encourages the development of algorithms that are robust to ungradable and unexpected input data. We evaluated solutions from 14 teams in this paper and found that the best teams performed similarly to a set of 20 expert ophthalmologists and optometrists. The highest-scoring team achieved an area under the receiver operating characteristic curve of 0.99 (95% CI: 0.98-0.99) for detecting ungradable images on-the-fly. Additionally, many of the algorithms showed robust performance when tested on three other publicly available datasets. These results demonstrate the feasibility of robust AI-enabled glaucoma screening.
Coen de Vente, Koen A. Vermeer, Nicolas Jaccard, He Wang 0016, Hongyi Sun, Firas Khader, Daniel Truhn, Temirgali Aimyshev, Yerkebulan Zhanibekuly, Tien-Dung Le, Adrian Galdran, Miguel Ángel González Ballester, Gustavo Carneiro 0001, Devika R. G., Hrishikesh Panikkasseril Sethumadhavan, Densen Puthussery, Hong Liu 0007, Zekang Yang, Satoshi Kondo, Satoshi Kasai, Ashritha Durvasula, Jónathan Heras, Miguel Ángel Zapata, Teresa Araujo, Guilherme Aresta, Hrvoje Bogunovic, Mustafa Arikan, Yeong Chan Lee, Hyun Bin Cho, Yoon Ho Choi, Abdul Qayyum 0002, Muhammad Imran Razzak, Bram van Ginneken, Hans G. Lemij, Clara I. Sánchez
IEEE Trans. Medical Imaging20
2023 CholecTriplet2022: Show me a tool and tell me the triplet - An endoscopic vision challenge for surgical action triplet detection
Chinedu Innocent Nwoye, Tong Yu 0009, Saurav Sharma, Aditya Murali, Deepak Alapatt, Armine Vardazaryan, Kun Yuan 0004, Jonas Hajek, Wolfgang Reiter, Amine Yamlahi, Finn-Henri Smidt, Xiaoyang Zou, Guoyan Zheng, Bruno Oliveira 0002, Helena R. Torres, Satoshi Kondo, Satoshi Kasai, Felix Holm, Ege Özsoy, Shuangchun Gui, Sista Raviteja, Rachana Sathish, Pranav Poudel, Binod Bhattarai, Ziheng Wang 0003, Guo Rui, Melanie Schellenberg, João L. Vilaça, Tobias Czempiel, Zhenkun Wang 0001, Debdoot Sheet, Shrawan Kumar Thapa, Max Berniker, Patrick Godau, Pedro Morais, Sudarshan Regmi, Thuy Nuong Tran, Jaime C. Fonseca 0001, Jan-Hinrich Nölke, Estevão Lima, Eduard Vazquez, Lena Maier-Hein, Nassir Navab, Pietro Mascagni, Barbara Seeliger, Cristians Gonzalez, Didier Mutter, Nicolas Padoy
Medical Image Anal.17
2021 EHR2CCAS: A framework for mapping EHR to disease knowledge presenting causal chain of disorders - chronic kidney disease example
Takeshi Imai, Emiko Shinohara, Satoshi Kasai, Kosuke Kato, Rina Kagawa, Kazuhiko Ohe
J. Biomed. Informatics4
2001 Development of an Automated Method for Detection Mammographic Masses with a Partial Loss of Region
abstract
Recently, we have been developing several automated algorithms for detecting masses on mammograms. For our algorithm, we devised an adaptive thresholding technique for detecting masses, but our system failed to detect masses with a partial loss of region that were located on the edge of the film. This is a common issue in all of the algorithms developed so far by other groups. In order to deal with this problem, we propose a new method in the present study. The partial loss masses are identified by their similarity to a sector-form model in the template matching process. To calculate the similarity, four features are applied: 1) average pixel value; 2) standard deviation of pixel values; 3) standard correlation coefficient defined by the sector-form model; and 4) concentration feature determined from the density gradient. After employing the new method to 335 digitized mammograms, the detection sensitivity for the partial loss masses jumped from 70% to 90% when the number of false positives was kept constant (0.2/image). Moreover, a combination of the existing method and the new method improved the true-positive rate up to 97%. Such results indicate that the new technique may improve the performance of our computer-aided diagnosis system for mammographic masses effectively.
Yuji Hatanaka, Takeshi Hara, Hiroshi Fujita 0001, Satoshi Kasai, Tokiko Endo, Takuji Iwase
IEEE Trans. Medical Imaging4