In recent years, the rise of open-source hardware has transformed the landscape of technology development. In particular, RISC-V has offered hardware designers the possibility of designing processors in a much cheaper way by leveraging a rich ecosystem of open-source designs that can be easily reused, extended, and customized. Although the RISC-V ecosystem is rapidly growing and open-source processors are becoming increasingly sophisticated, some advanced architectural techniques typically employed in commercial high-performance processors are still not prevalent in RISC-V open-source architectures. Among them, hardware prefetchers have been ubiquitous in highend processors for many years, but they are not as commonly found in open-source RISC-V processors. To bridge this gap, this work presents FetchFlare, a stride prefetcher for highperformance cache hierarchies. FetchFlare is able to capture the memory access patterns of applications, predict future memory accesses, and issue prefetch requests for them. We provide an open-source RTL implementation of FetchFlare and integrate it into a complete open-source setup formed by the OpenPiton framework, the Sargantana core, and the High-Performance Data Cache (HPDCache). Compared to a baseline system without prefetching, FetchFlare achieves an average speedup of $63 \%$, avoids cache misses in the L1D and the L2 caches, and presents an average accuracy, coverage, and timeliness of $86 \%, 39 \%$, and 99%, respectively.

To alleviate the performance and energy overheads of contemporary applications with large data footprints, we propose the Two Level Perceptron (TLP) predictor, a neural mechanism that effectively combines predicting whether an access will be off-chip with adaptive prefetch filtering at the first-level data cache (L1D). TLP is composed of two connected microarchitectural perceptron predictors, named First Level Predictor (FLP) and Second Level Predictor (SLP). FLP performs accurate off-chip prediction by using several program features based on virtual addresses and a novel selective delay component. The novelty of SLP relies on leveraging off-chip prediction to drive L1D prefetch filtering by using physical addresses and the FLP prediction as features. TLP constitutes the first hardware proposal targeting both off-chip prediction and prefetch filtering using a multilevel perceptron hardware approach. TLP only requires 7KB of storage. To demonstrate the benefits of TLP we compare its performance with state-of-the-art approaches using off-chip prediction and prefetch filtering on a wide range of single-core and multi-core workloads. Our experiments show that TLP reduces the average DRAM transactions by 30.7% and 17.7%, as compared to a baseline using state-of-the-art cache prefetchers but no off-chip prediction mechanism, across the single-core and multi-core workloads, respectively, while recent work significantly increases DRAM transactions. As a result, TLP achieves geometric mean performance speedups of 6.2% and 11.8% across single-core and multi-core workloads, respectively. In addition, our evaluation demonstrates that TLP is effective independently of the L1D prefetching logic.

Graph-processing workloads have become widespread due to their relevance on a wide range of application domains such as network analysis, path-planning, bioinformatics, and machine learning. Graph-processing workloads have massive data footprints that exceed cache storage capacity and exhibit highly irregular memory access patterns due to data-dependent graph traversals. This irregular behaviour causes graph-processing workloads to exhibit poor data locality, undermining their performance.This paper makes two fundamental observations on the memory access patterns of graph-processing workloads: First, conventional cache hierarchies become mostly useless when dealing with graph-processing workloads, since 78.6% of the accesses that miss in the L1 Data Cache (L1D) result in misses in the L2 Cache (L2C) and in the Last Level Cache (LLC), requiring a DRAM access. Second, it is possible to predict whether a memory access will be served by DRAM or not in the context of graph-processing workloads by observing strides between accesses triggered by instructions with the same Program Counter (PC). Our key insight is that bypassing the L2C and the LLC for highly irregular accesses significantly reduces latency cost while also reducing pressure on the lower levels of the cache hierarchy.Based on these observations, this paper proposes the Large Predictor (LP), a low-cost micro-architectural predictor capable of distinguishing between regular and irregular memory accesses. We propose to serve accesses tagged as regular by LP via the standard memory hierarchy, while irregular access are served via the Side Data Cache (SDC). The SDC is a private per-core set-associative cache placed alongside the L1D specifically aimed at reducing the latency cost of highly irregular accesses while avoiding polluting the rest of the cache hierarchy with data that exhibits poor locality. SDC coupled with LP yields geometric mean speed-ups of 20.3% and 20.2% on single- and multi-core scenarios, respectively, over an architecture featuring a conventional cache hierarchy across a set of contemporary graph-processing workloads. In addition, SDC combined with LP outperforms the Transpose-based Cache Replacement (T-OPT), the state-of-the-art cache replacement policy for graph-processing applications, by 10.9% and 13.8% on single-core and multi-core contexts, respectively. Regarding the hardware budget, SDC coupled with LP requires 10KB of storage per core.

The eProcessor project aims at creating a RISC-V full stack ecosystem. The eProcessor architecture combines a high-performance out-of-order core with energy-efficient accelerators for vector processing and artificial intelligence with reduced-precision functional units. The design of this architecture follows a hardware/software co-design approach with relevant application use cases from the high-performance computing, bioinformatics and artificial intelligence domains. Two eProcessor prototypes will be developed based on two fabricated eProcessor ASICs integrated into a computer-on-module.

The ever-increasing yields in genome sequence data production pose a computational challenge to current genome sequence analysis tools, jeopardizing the future of personalized medicine. Leveraging hardware accelerators (GPUs, FPGAs, and ASICs) to accelerate computationally-intensive algorithms like sequence alignment has become paramount. Recently, the wavefront alignment algorithm was introduced, significantly reducing the execution time to perform sequence alignment. This paper presents the first-ever ASIC accelerator of the WFA integrated into a RISC-V system-on-chip. Our designed chip greatly accelerates sequence alignment, delivering up to 1076 × better performance over the CPU implementation of the WFA running on the RISC-V core of the chip.

The number and heterogeneity of compute devices, even within a single compute node, has been steadily on the rise. Since all systems must operate under a power cap, the number of discrete devices that can run simultaneously at their highest frequency is limited by the globally-imposed power cap. Current systems incorporate a centralized power management unit that statically controls the distribution of power among the devices within the node. However, such static distribution policies are unaware of the dynamic utilization profile across the devices, which leads to unfair power allocations that end up degrading system throughput performance. The problem is particularly acute in the presence of heterogeneity since type-specific performance-boost capabilities cannot be leveraged via utilization-agnostic static power allocations. This paper proposes Adaptive Power Shifting for multi-accelerator heterogeneous systems (APS), a technique that leverages system utilization information to dynamically allocate and re-distribute power budgets across multiple discrete devices. Democratizing the power allocation based on dynamic needs results in dramatic speedup over a need-agnostic static allocation. We use APS in a real OpenPOWER compute node with 2 CPUs and 4 GPUs to demonstrate the value of on-demand, equitable power allocations. Overall, the proposed solution increases performance with respect to two state-of-the-art techniques by up to 14.9% and 13.8%.

The increase in working set sizes of contemporary applications outpaces the growth in cache sizes, resulting in frequent main memory accesses that deteriorate system performance due to the disparity between processor and memory speeds. Prefetching data blocks into the cache hierarchy ahead of demand accesses has proven successful at attenuating this bottleneck. However, spatial cache prefetchers operating in the physical address space leave significant performance on the table by limiting their pattern detection within 4KB physical page boundaries when modern systems use page sizes larger than 4KB to mitigate the address translation overheads. This paper exploits the high usage of large pages in modern systems to increase the effectiveness of spatial cache prefetching. We design and propose the Page-size Propagation Module (PPM), a $\mu$architectural scheme that propagates the page size information to the lower-level cache prefetchers, enabling safe prefetching beyond 4KB physical page boundaries when the accessed blocks reside in large pages, at the cost of augmenting the first-level caches’ Miss Status Holding Register (MSHR) entries with one additional bit. PPM is compatible with any cache prefetcher without implying design modifications. We capitalize on PPM’s benefits by designing a module that consists of two page size aware prefetchers that inherently use different page sizes to drive prefetching. The composite module uses adaptive logic to dynamically enable the most appropriate page size aware prefetcher. Finally, we show that the proposed designs are transparent to which cache prefetcher is used. We apply the proposed page size exploitation techniques to four state-of-the-art spatial cache prefetchers. Our evaluation shows that our proposals improve single-core geomean performance by up to 8.1% (2.1% at minimum) over the original implementation of the considered prefetchers, across 80 memory-intensive workloads. In multi-core contexts, we report geomean speedups up to 7.7% across different cache prefetchers and core configurations.

In high performance processors, the design of on-chip memory hierarchies is crucial for performance and energy efficiency. Current processors rely on large shared Non-Uniform Cache Architectures (NUCA) to improve performance and reduce data movement. Multiple solutions exploit information available at the microarchitecture level or in the operating system to optimize NUCA performance. However, existing methods have not taken advantage of the information captured by task dataflow programming models to guide the management of NUCA caches. In this paper we propose TD-NUCA, a hardware/software co-designed approach that leverages information present in the run-time system of task dataflow programming models to efficiently manage NUCA caches. TD-NUCA identifies the data access and reuse patterns of parallel applications in the runtime system and guides the operation of the NUCA caches in the hardware. As a result, TD-NUCA achieves a 1.18x average speedup over the baseline S-NUCA while requiring only 0.62x the data movement.

An FPGA accelerator for the computation of the semi-global Levenshtein distance between a pattern and a reference text is presented. The accelerator provides an important benefit to reduce the execution time of read-mappers used in short-read genomic sequencing. Previous attempts to solve the same problem in FPGA use the Myers algorithm following a column approach to compute the dynamic programming table. We use an approach based on diagonals that allows for some resource savings while maintaining a very high throughput of 1 alignment per clock cycle. The design is implemented in OpenCL and tested on two FPGA accelerators. The maximum performance obtained is 91.5 MPairs/s for 100 × 120 sequences and 47 MPairs/s for 300 × 360 sequences, the highest ever reported for this problem.

In the last years, advances in next-generation sequencing technologies have enabled the proliferation of genomic applications that guide personalized medicine. These applications have an enormous computational cost due to the large amount of genomic data they process. The first step in many of these applications consists in aligning reads against a reference genome. Very recently, the wavefront alignment algorithm has been introduced, significantly reducing the execution time of the read alignment process. This paper presents the first FPGA-based hardware/software co-designed accelerator of such relevant algorithm. Compared to the reference WFA CPU-only implementation, the proposed FPGA accelerator achieves performance speedups of up to 13.5 × while consuming up to 14.6 × less energy.

Frequent Translation Lookaside Buffer (TLB) misses incur high performance and energy costs due to page walks required for fetching the corresponding address translations. Prefetching page table entries (PTEs) ahead of demand TLB accesses can mitigate the address translation performance bottleneck, but each prefetch requires traversing the page table, triggering additional accesses to the memory hierarchy. Therefore, TLB prefetching is a costly technique that may undermine performance when the prefetches are not accurate.In this paper we exploit the locality in the last level of the page table to reduce the cost and enhance the effectiveness of TLB prefetching by fetching cache-line adjacent PTEs "for free". We propose Sampling-Based Free TLB Prefetching (SBFP), a dynamic scheme that predicts the usefulness of these "free" PTEs and prefetches only the ones most likely to prevent TLB misses. We demonstrate that combining SBFP with novel and state-of-the-art TLB prefetchers significantly improves miss coverage and reduces most memory accesses due to page walks.Moreover, we propose Agile TLB Prefetcher (ATP), a novel composite TLB prefetcher particularly designed to maximize the benefits of SBFP. ATP efficiently combines three low-cost TLB prefetchers and disables TLB prefetching for those execution phases that do not benefit from it. Unlike state-of-the-art TLB prefetchers that correlate patterns with only one feature (e.g., strides, PC, distances), ATP correlates patterns with multiple features and dynamically enables the most appropriate TLB prefetcher per TLB miss.To alleviate the address translation performance bottleneck, we propose a unified solution that combines ATP and SBFP. Across an extensive set of industrial workloads provided by Qualcomm, ATP coupled with SBFP improves geometric speedup by 16.2%, and eliminates on average 37% of the memory references due to page walks. Considering the SPEC CPU 2006 and SPEC CPU 2017 benchmark suites, ATP with SBFP increases geometric speedup by 11.1%, and eliminates page walk memory references by 26%. Applied to big data workloads (GAP suite, XSBench), ATP with SBFP yields a geometric speedup of 11.8% while reducing page walk memory references by 5%. Over the best state-of-the-art TLB prefetcher for each benchmark suite, ATP with SBFP achieves speedups of 8.7%, 3.4%, and 4.2% for the Qualcomm, SPEC, and GAP+XSBench workloads, respectively.

The effort to reduce address translation overheads has typically targeted data accesses since they constitute the overwhelming portion of the second-level TLB (STLB) misses in desktop and HPC applications. The address translation cost of instruction accesses has been relatively neglected due to historically small instruction footprints. However, state-of-the-art datacenter and server applications feature massive instruction footprints owing to deep software stacks, resulting in high STLB miss rates for instruction accesses.

Current microprocessors include several knobs to modify the hardware behavior in order to improve performance, power, and energy under different workload demands. An impractical and time consuming offline profiling is needed to evaluate the design space to find the optimal knob configuration. Different knobs are typically configured in a decoupled manner to avoid the time-consuming offline profiling process. This can often lead to underperforming configurations and conflicting decisions that jeopardize system power-performance efficiency. Thus, a dynamic management of the different hardware knobs is necessary to find the knob configuration that maximizes system power-performance efficiency without the burden of offline profiling. In this article, we propose libPRISM, an infrastructure that enables the transparent management of multiple hardware knobs in order to adapt the system to the evolving demands of hardware resources in different workloads. libPRISM can minimize execution time, energy-delay product or power consumption by dynamically managing the SMT level, the data prefetcher, and the DVFS hardware knobs. Overall, the proposed solutions increase performance up to 130 percent (16.9 percent on average), reduce energy-delay product up to 80 percent, and reduce power consumption up to 33 percent depending on the target metric compared to the default knob configuration of the system.

Advances in Next Generation Sequencing (NGS) technologies have caused the proliferation of genomic applications to detect DNA mutations and guide personalized medicine. These applications have an enormous computational cost due to the large amount of genomic data they process. Although leveraging FPGAs can improve the processing time of such amount of data, the limited memory capacity of FPGAs often restricts the potential gains. To overcome this limitation, IBM CAPI (Coherent Accelerator Processor Interface) supported platforms provide FPGAs with direct access to the CPU memory. This paper proposes a hardware/software co-design for k-mer counting, one of the most time-consuming phases of genomic applications. The proposed co-design targets CAPI-enabled FPGAs and is integrated into SMUFIN, a state-of-the-art reference-free method for finding DNA mutations. Results show that the proposed co-design outperforms the CPU-only design by a factor of 2.14×, it consumes 2.93× less energy, and it requires 1.57× less memory.

Given the overwhelming impact of machine learning on the last decade, several libraries and frameworks have been developed in recent years to simplify the design and training of neural networks, providing array-based programming, automatic differentiation and user-friendly access to hardware accelerators. None of those tools, however, was designed with native and transparent support for Cloud Computing or heterogeneous High-Performance Computing (HPC). The DeepHealth Toolkit is an open source Deep Learning toolkit aimed at boosting productivity of data scientists operating in the medical field by providing a unified framework for the distributed training of neural networks, which is able to leverage hybrid HPC and cloud environments in a transparent way for the user. The toolkit is composed of a Computer Vision library, a Deep Learning library, and a front-end for non-expert users; all of the components are focused on the medical domain, but they are general purpose and can be applied to any other field. In this paper, the principles driving the design of the DeepHealth libraries are described, along with details about the implementation and the interaction between the different elements composing the toolkit. Finally, experiments on common benchmarks prove the efficiency of each separate component and of the DeepHealth Toolkit overall.

The growing complexity of multi-core architectures has motivated a wide range of software mechanisms to improve the orchestration of parallel executions. Task parallelism has become a very attractive approach thanks to its programmability, portability and potential for optimizations. However, with the expected increase in core counts, finer-grained tasking will be required to exploit the available parallelism, which will increase the overheads introduced by the runtime system. This work presents Task Dependence Manager (TDM), a hardware/software co-designed mechanism to mitigate runtime system overheads. TDM introduces a hardware unit, denoted Dependence Management Unit (DMU), and minimal ISA extensions that allow the runtime system to offload costly dependence tracking operations to the DMU and to still perform task scheduling in software. With lower hardware cost, TDM outperforms hardware-based solutions and enhances the flexibility, adaptability and composability of the system. Results show that TDM improves performance by 12.3% and reduces EDP by 20.4% on average with respect to a software runtime system. Compared to a runtime system fully implemented in hardware, TDM achieves an average speedup of 4.2% with 7.3x less area requirements and significant EDP reductions. In addition, five different software schedulers are evaluated with TDM, illustrating its flexibility and performance gains.

Stacked DRAM memories have become a reality in High-Performance Computing (HPC) architectures. These memories provide much higher bandwidth while consuming less power than traditional off-chip memories, but their limited memory capacity is insufficient for modern HPC systems. For this reason, both stacked DRAM and off-chip memories are expected to co-exist in HPC architectures, giving raise to different approaches for architecting the stacked DRAM in the system.

Cache Coherent NUMA (ccNUMA) architectures are a widespread paradigm due to the benefits they provide for scaling core count and memory capacity. Also, the flat memory address space they offer considerably improves programmability. However, ccNUMA architectures require sophisticated and expensive cache coherence protocols to enforce correctness during parallel executions, which trigger a significant amount of on- and off-chip traffic in the system. This paper analyses how coherence traffic may be best constrained in a large, real ccNUMA platform comprising 288 cores through the use of a joint hardware/software approach. For several benchmarks, we study coherence traffic in detail under the influence of an added hierarchical cache layer in the directory protocol combined with runtime managed NUMA-aware scheduling and data allocation techniques to make most efficient use of the added hardware. The effectiveness of this joint approach is demonstrated by speedups of 3.14× to 9.97× and coherence traffic reductions of up to 99 percent in comparison to NUMA-oblivious scheduling and data allocation.

Managing criticality in task-based programming models opens a wide range of performance and power optimization opportunities in future manycore systems. Criticality aware task schedulers can benefit from these opportunities by scheduling tasks to the most appropriate cores. However, these schedulers may suffer from priority inversion and static binding problems that limit their expected improvements. Based on the observation that task criticality information can be exploited to drive hardware reconfigurations, we propose a Criticality Aware Task Acceleration (CATA) mechanism that dynamically adapts the computational power of a task depending on its criticality. As a result, CATA achieves significant improvements over a baseline static scheduler, reaching average improvements up to 18.4% in execution time and 30.1% in Energy-Delay Product (EDP) on a simulated 32-core system. The cost of reconfiguring hardware by means of a software-only solution rises with the number of cores due to lock contention and reconfiguration overhead. Therefore, novel architectural support is proposed to eliminate these overheads on future manycore systems. This architectural support minimally extends hardware structures already present in current processors, which allows further improvements in performance with negligible overhead. As a consequence, average improvements of up to 20.4% in execution time and 34.0% in EDP are obtained, outperforming state-of-the-art acceleration proposals not aware of task criticality.

The increasing number of cores and the anticipated level of heterogeneity in upcoming multicore architectures cause important problems in traditional cache hierarchies. A good way to alleviate these problems is to add scratchpad memories alongside the cache hierarchy, forming a hybrid memory hierarchy. This memory organization has the potential to improve performance and to reduce the power consumption and the on-chip network traffic, but exposing such a complex memory model to the programmer has a very negative impact on the programmability of the architecture. Emerging task-based programming models are a promising alternative to program heterogeneous multicore architectures. In these models the runtime system manages the execution of the tasks on the architecture, allowing them to apply many optimizations in a generic way at the runtime system level. This paper proposes giving the runtime system the responsibility to manage the scratchpad memories of a hybrid memory hierarchy in multicore processors, transparently to the programmer. In the envisioned system, the runtime system takes advantage of the information found in the task dependences to map the inputs and outputs of a task to the scratchpad memory of the core that is going to execute it. In addition, the paper exploits two mechanisms to overlap the data transfers with computation and a locality-aware scheduler to reduce the data motion. In a 32-core multicore architecture, the hybrid memory hierarchy outperforms cache-only hierarchies by up to 16%, reduces on-chip network traffic by up to 31% and saves up to 22% of the consumed power.

The increasing number of cores in manycore architectures causes important power and scalability problems in the memory subsystem. One solution is to introduce scratchpad memories alongside the cache hierarchy, forming a hybrid memory system. Scratchpad memories are more power-efficient than caches and they do not generate coherence traffic, but they suffer from poor programmability. A good way to hide the programmability difficulties to the programmer is to give the compiler the responsibility of generating code to manage the scratchpad memories. Unfortunately, compilers do not succeed in generating this code in the presence of random memory accesses with unknown aliasing hazards.

Cache coherence protocols limit the scalability of multicore and manycore architectures and are responsible for an important amount of the power consumed in the chip. A good way to alleviate these problems is to introduce a local memory alongside the cache hierarchy, forming a hybrid memory system. Local memories are more power-efficient than caches and do not generate coherence traffic, but they suffer from poor programmability. When non-predictable memory access patterns are found, compilers do not succeed in generating code because of the incoherence between the two storages. This paper proposes a coherence protocol for hybrid memory systems that allows the compiler to generate code even in the presence of memory aliasing problems. Coherence is ensured by a software/hardware co-design where the compiler identifies potentially incoherent memory accesses and the hardware diverts them to the correct copy of the data. The coherence protocol introduces overheads of 0.26% in execution time and of 2.03% in energy consumption to enable the usage of the hybrid memory system, which outperforms cache-based systems by an speedup of 38% and an energy reduction of 27%.

Cache coherence protocols limit the scalability of chip multiprocessors. One solution is to introduce a local memory alongside the cache hierarchy, forming a hybrid memory system. Local memories are more power-efficient than caches and they do not generate coherence traffic but they suffer from poor programmability. When non-predictable memory access patterns are found compilers do not succeed in generating code because of the incoherency between the two storages. This paper proposes a coherence protocol for hybrid memory systems that allows the compiler to generate code even in the presence of memory aliasing problems. Coherency is ensured by a simple software/hardware co-design where the compiler identifies potentially incoherent memory accesses and the hardware diverts them to the correct copy of the data. The coherence protocol introduces overheads of 0.24% in execution time and of 1.06% in energy consumption to enable the usage of the hybrid memory system.

Chip multiprocessors (CMPs) are the dominating architectures nowadays. There is a big variety of designs in current CMPs, with different number of cores and memory subsystems. This is because they are used in a wide spectrum of domains, each of them with their own design goals. This pa per studies different chip configurations in terms of number of cores, size of the shared L3 cache and off-chip bandwidth requirements in order to find what is the most efficient design for High Performance Computing applications. Results show that CMP schemes that reduce the shared L3 cache in order to make room for additional cores achieve speedups of up to 3.31x against a baseline architecture.

The cell broadband engine architecture (CBEA) is an heterogeneous multiprocessor architecture developed by Sony, Toshiba and IBM. The major implementation of this architecture is the cell broadband engine (cell for short), a processor that contains one generic PowerPC core and eight accelerators. The cell is targeted at high-performance computing systems and consumer-level devices that have high computational requirements. The workloads for the former are generally run in a queue-based environment while those for the latter are multiprogrammed. Applications for the cell are composed of multiple parallel tasks: one runs on the PowerPC core and one or more run on the accelerators. The operating system (OS) is in charge of scheduling these tasks on top of the physical processors, and such scheduling decisions become critical in multiprogrammed environments. System developers need a way to analyze how user applications behave in these conditions to be able to tune the OS internal algorithms. This article presents Cetra, a new tool-set that allows system developers to study how cell workloads interact with Linux, the OS kernel. First, we outline the major features of Cetra and provide a detailed description of its internals. Then, we demonstrate the usefulness of Cetra by presenting a case study that shows the features of the tool-set and allows us to compare the results to those provided by other performance analysis tools available in the market. At last, we describe another case study in which we discovered a scheduling starvation bug using Cetra.