Siddhartha Mishra

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24ranked-venue papers
1as first author
24since 2021 · last 2025
—ORCID · conflict

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Artificial intelligence and machine learning · 24 · 1 first-author · 24 since 2021Graphics, computer vision, multimedia, augmented reality and games · 1 · 1 first-author · 1 since 2021
YearPublicationVenuePosition
2025 HyPINO: Multi-Physics Neural Operators via HyperPINNs and the Method of Manufactured Solutions
abstract
We present HyPINO, a multi-physics neural operator designed for zero-shot generalization across a broad class of PDEs without requiring task-specific fine-tuning. Our approach combines a Swin Transformer-based hypernetwork with mixed supervision: (i) labeled data from analytical solutions generated via the Method of Manufactured Solutions (MMS), and (ii) unlabeled samples optimized using physics-informed objectives. The model maps PDE parameterizations to target Physics-Informed Neural Networks (PINNs) and can handle linear elliptic, hyperbolic, and parabolic equations in two dimensions with varying source terms, geometries, and mixed Dirichlet/Neumann boundary conditions, including interior boundaries. HyPINO achieves strong zero-shot accuracy on seven benchmark problems from PINN literature, outperforming U-Nets, Poseidon, and Physics-Informed Neural Operators (PINO). Further, we introduce an iterative refinement procedure that treats the residual of the generated PINN as "delta PDE" and performs another forward pass to generate a corrective PINN. Summing their contributions and repeating this process forms an ensemble whose combined solution progressively reduces the error on six benchmarks and achieves a >100× lower $L_2$ loss in the best case, while retaining forward-only inference. Additionally, we evaluate the fine-tuning behavior of PINNs initialized by HyPINO and show that they converge faster and to lower final error than both randomly initialized and Reptile-meta-learned PINNs on five benchmarks, performing on par on the remaining two. Our results highlight the potential of this scalable approach as a foundation for extending neural operators toward solving increasingly complex, nonlinear, and high-dimensional PDE problems. The code and model weights are publicly available at https://github.com/rbischof/hypino.
Rafael Bischof, Michal Piovarci, Michael A. Kraus, Siddhartha Mishra, Bernd Bickel
NeurIPS4
2025 RIGNO: A Graph-based Framework For Robust And Accurate Operator Learning For PDEs On Arbitrary Domains
abstract
Learning the solution operators of PDEs on arbitrary domains is challenging due to the diversity of possible domain shapes, in addition to the often intricate underlying physics. We propose an end-to-end graph neural network (GNN) based neural operator to learn PDE solution operators from data on point clouds in arbitrary domains. Our multi-scale model maps data between input/output point clouds by passing it through a downsampled regional mesh. The approach includes novel elements aimed at ensuring spatio-temporal resolution invariance. Our model, termed RIGNO, is tested on a challenging suite of benchmarks composed of various time-dependent and steady PDEs defined on a diverse set of domains. We demonstrate that RIGNO is significantly more accurate than neural operator baselines and robustly generalizes to unseen resolutions both in space and in time. Our code is publicly available at github.com/camlab-ethz/rigno.
Sepehr Mousavi, Shizheng Wen, Levi E. Lingsch, Maximilian Herde, Bogdan Raonic, Siddhartha Mishra
NeurIPS6
2025 Geometry Aware Operator Transformer as an efficient and accurate neural surrogate for PDEs on arbitrary domains
abstract
The very challenging task of learning solution operators of PDEs on arbitrary domains accurately and efficiently is of vital importance to engineering and industrial simulations. Despite the existence of many operator learning algorithms to approximate such PDEs, we find that accurate models are not necessarily computationally efficient and vice versa. We address this issue by proposing a geometry aware operator transformer (GAOT) for learning PDEs on arbitrary domains. GAOT combines novel multiscale attentional graph neural operator encoders and decoders, together with geometry embeddings and (vision) transformer processors to accurately map information about the domain and the inputs into a robust approximation of the PDE solution. Multiple innovations in the implementation of GAOT also ensure computational efficiency and scalability. We demonstrate this significant gain in both accuracy and efficiency of GAOT over several baselines on a large number of learning tasks from a diverse set of PDEs, including achieving state of the art performance on three large scale three-dimensional industrial CFD datasets. Our project page for accessing the source code is available at https://camlab-ethz.github.io/GAOT.
Shizheng Wen, Arsh Kumbhat, Levi E. Lingsch, Sepehr Mousavi, Praveen Chandrashekar, Siddhartha Mishra
NeurIPS7
2024 An operator preconditioning perspective on training in physics-informed machine learning
abstract
In this paper, we investigate the behavior of gradient descent algorithms in physics-informed machine learning methods like PINNs, which minimize residuals connected to partial differential equations (PDEs). Our key result is that the difficulty in training these models is closely related to the conditioning of a specific differential operator. This operator, in turn, is associated to the Hermitian square of the differential operator of the underlying PDE. If this operator is ill-conditioned, it results in slow or infeasible training. Therefore, preconditioning this operator is crucial. We employ both rigorous mathematical analysis and empirical evaluations to investigate various strategies, explaining how they better condition this critical operator, and consequently improve training.
Tim De Ryck, Florent Bonnet, Siddhartha Mishra, Emmanuel de Bézenac
ICLR3
2024 Beyond Regular Grids: Fourier-Based Neural Operators on Arbitrary Domains
abstract
The computational efficiency of many neural operators, widely used for learning solutions of PDEs, relies on the fast Fourier transform (FFT) for performing spectral computations. As the FFT is limited to equispaced (rectangular) grids, this limits the efficiency of such neural operators when applied to problems where the input and output functions need to be processed on general non-equispaced point distributions. Leveraging the observation that a limited set of Fourier (Spectral) modes suffice to provide the required expressivity of a neural operator, we propose a simple method, based on the efficient direct evaluation of the underlying spectral transformation, to extend neural operators to arbitrary domains. An efficient implementation of such direct spectral evaluations is coupled with existing neural operator models to allow the processing of data on arbitrary non-equispaced distributions of points. With extensive empirical evaluation, we demonstrate that the proposed method allows us to extend neural operators to arbitrary point distributions with significant gains in training speed over baselines, while retaining or improving the accuracy of Fourier neural operators (FNOs) and related neural operators.
Levi E. Lingsch, Mike Yan Michelis, Emmanuel de Bézenac, Sirani M. Perera, Robert K. Katzschmann, Siddhartha Mishra
ICML6
2024 SmallToLarge (S2L): Scalable Data Selection for Fine-tuning Large Language Models by Summarizing Training Trajectories of Small Models
abstract
Despite the effectiveness of data selection for pretraining and instruction fine-tuning large language models (LLMs), improving data efficiency in supervised fine-tuning (SFT) for specialized domains poses significant challenges due to the complexity of fine-tuning data. To bridge this gap, we introduce an effective and scalable data selection method for SFT, SmallToLarge (S2L), which trains a small model, clusters loss trajectories of the examples, and samples from these clusters to guide data selection for larger models. We prove that during fine-tuning, samples within the same loss trajectory cluster exhibit similar gradients. Then, we show that S2L subsets have a bounded gradient error w.r.t. the full data, hence guarantee convergence to the neighborhood of the optimal solution. We demonstrate through extensive experiments that S2L significantly improves data efficiency in SFT for mathematical problem-solving, reducing the training data requirement to just $11$% of the original MathInstruct dataset to match full dataset performance while outperforming state-of-the-art data selection algorithms by an average of $4.7$% across $6$ in- and out-domain evaluation datasets. Remarkably, selecting only 50K data for SFT, S2L achieves a $32.7$% accuracy on the challenging MATH benchmark, improving Phi-2 by $16.6$%. In clinical text summarization on the MIMIC-III dataset, S2L again outperforms training on the full dataset using only $50$% of the data. Notably, S2L can perform scalable data selection using a reference model $100\times$ smaller than the target model, proportionally reducing the computational cost.
Yu Yang 0007, Siddhartha Mishra, Jeffrey N. Chiang, Baharan Mirzasoleiman
NeurIPS2
2024 Poseidon: Efficient Foundation Models for PDEs
abstract
We introduce Poseidon, a foundation model for learning the solution operators of PDEs. It is based on a multiscale operator transformer, with time-conditioned layer norms that enable continuous-in-time evaluations. A novel training strategy leveraging the semi-group property of time-dependent PDEs to allow for significant scaling-up of the training data is also proposed. Poseidon is pretrained on a diverse, large scale dataset for the governing equations of fluid dynamics. It is then evaluated on a suite of 15 challenging downstream tasks that include a wide variety of PDE types and operators. We show that Poseidon exhibits excellent performance across the board by outperforming baselines significantly, both in terms of sample efficiency and accuracy. Poseidon also generalizes very well to new physics that is not seen during pretraining. Moreover, Poseidon scales with respect to model and data size, both for pretraining and for downstream tasks. Taken together, our results showcase the surprising ability of Poseidon to learn effective representations from a very small set of PDEs during pretraining in order to generalize well to unseen and unrelated PDEs downstream, demonstrating its potential as an effective, general purpose PDE foundation model. Finally, the Poseidon model as well as underlying pretraining and downstream datasets are open sourced, with code being available at https://github.com/camlab-ethz/poseidon and pretrained models and datasets at https://huggingface.co/camlab-ethz.
Maximilian Herde, Bogdan Raonic, Tobias Rohner, Roger Käppeli, Roberto Molinaro, Emmanuel de Bézenac, Siddhartha Mishra
NeurIPS7
2024 FUSE: Fast Unified Simulation and Estimation for PDEs
abstract
The joint prediction of continuous fields and statistical estimation of the underlying discrete parameters is a common problem for many physical systems, governed by PDEs. Hitherto, it has been separately addressed by employing operator learning surrogates for field prediction while using simulation-based inference (and its variants) for statistical parameter determination. Here, we argue that solving both problems within the same framework can lead to consistent gains in accuracy and robustness. To this end, we propose a novel and flexible formulation of the operator learning problem that jointly predicts continuous quantities and infers distributions of discrete parameters, thereby amortizing the cost of both the inverse and the surrogate models to a joint pre-training step. We present the capabilities of the proposed methodology for predicting continuous and discrete biomarkers in full-body haemodynamics simulations under different levels of missing information. We also consider a test case for atmospheric large-eddy simulation of a two-dimensional dry cold bubble, where we infer both continuous time-series and information about the system's conditions. We present comparisons against different baselines to showcase significantly increased accuracy in both the inverse and the surrogate tasks.
Levi E. Lingsch, Dana Grund, Siddhartha Mishra, Georgios Kissas
NeurIPS3
2023 Nonlinear Reconstruction for Operator Learning of PDEs with Discontinuities
Samuel Lanthaler, Roberto Molinaro, Patrik Hadorn, Siddhartha Mishra
ICLR4
2023 Gradient Gating for Deep Multi-Rate Learning on Graphs
T. Konstantin Rusch, Benjamin Paul Chamberlain, Michael W. Mahoney, Michael M. Bronstein, Siddhartha Mishra
ICLR5
2023 Neural Inverse Operators for Solving PDE Inverse Problems
abstract
A large class of inverse problems for PDEs are only well-defined as mappings from operators to functions. Existing operator learning frameworks map functions to functions and need to be modified to learn inverse maps from data. We propose a novel architecture termed Neural Inverse Operators (NIOs) to solve these PDE inverse problems. Motivated by the underlying mathematical structure, NIO is based on a suitable composition of DeepONets and FNOs to approximate mappings from operators to functions. A variety of experiments are presented to demonstrate that NIOs significantly outperform baselines and solve PDE inverse problems robustly, accurately and are several orders of magnitude faster than existing direct and PDE-constrained optimization methods.
Roberto Molinaro, Yunan Yang, Björn Engquist, Siddhartha Mishra
ICML4
2023 Representation Equivalent Neural Operators: a Framework for Alias-free Operator Learning
abstract
Recently, operator learning, or learning mappings between infinite-dimensional function spaces, has garnered significant attention, notably in relation to learning partial differential equations from data. Conceptually clear when outlined on paper, neural operators necessitate discretization in the transition to computer implementations. This step can compromise their integrity, often causing them to deviate from the underlying operators. This research offers a fresh take on neural operators with a framework Representation equivalent Neural Operators (ReNO) designed to address these issues. At its core is the concept of operator aliasing, which measures inconsistency between neural operators and their discrete representations. We explore this for widely-used operator learning techniques. Our findings detail how aliasing introduces errors when handling different discretizations and grids and loss of crucial continuous structures. More generally, this framework not only sheds light on existing challenges but, given its constructive and broad nature, also potentially offers tools for developing new neural operators.
Francesca Bartolucci, Emmanuel de Bézenac, Bogdan Raonic, Roberto Molinaro, Siddhartha Mishra, Rima Alaifari
NeurIPS5
2023 Neural Oscillators are Universal
abstract
Coupled oscillators are being increasingly used as the basis of machine learning (ML) architectures, for instance in sequence modeling, graph representation learning and in physical neural networks that are used in analog ML devices. We introduce an abstract class of *neural oscillators* that encompasses these architectures and prove that neural oscillators are universal, i.e, they can approximate any continuous and casual operator mapping between time-varying functions, to desired accuracy. This universality result provides theoretical justification for the use of oscillator based ML systems. The proof builds on a fundamental result of independent interest, which shows that a combination of forced harmonic oscillators with a nonlinear read-out suffices to approximate the underlying operators.
Samuel Lanthaler, T. Konstantin Rusch, Siddhartha Mishra
NeurIPS3
2023 Convolutional Neural Operators for robust and accurate learning of PDEs
abstract
Although very successfully used in conventional machine learning, convolution based neural network architectures -- believed to be inconsistent in function space -- have been largely ignored in the context of learning solution operators of PDEs. Here, we present novel adaptations for convolutional neural networks to demonstrate that they are indeed able to process functions as inputs and outputs. The resulting architecture, termed as convolutional neural operators (CNOs), is designed specifically to preserve its underlying continuous nature, even when implemented in a discretized form on a computer. We prove a universality theorem to show that CNOs can approximate operators arising in PDEs to desired accuracy. CNOs are tested on a novel suite of benchmarks, encompassing a diverse set of PDEs with multi-scale solutions and are observed to significantly outperform baselines, paving the way for an alternative framework for robust and accurate operator learning.
Bogdan Raonic, Roberto Molinaro, Tim De Ryck, Tobias Rohner, Francesca Bartolucci, Rima Alaifari, Siddhartha Mishra, Emmanuel de Bézenac
NeurIPS7
2022 An Evaluative Measure of Clustering Methods Incorporating Hyperparameter Sensitivity
abstract
Clustering algorithms are often evaluated using metrics which compare with ground-truth cluster assignments, such as Rand index and NMI. Algorithm performance may vary widely for different hyperparameters, however, and thus model selection based on optimal performance for these metrics is discordant with how these algorithms are applied in practice, where labels are unavailable and tuning is often more art than science. It is therefore desirable to compare clustering algorithms not only on their optimally tuned performance, but also some notion of how realistic it would be to obtain this performance in practice. We propose an evaluation of clustering methods capturing this ease-of-tuning by modeling the expected best clustering score under a given computation budget. To encourage the adoption of the proposed metric alongside classic clustering evaluations, we provide an extensible benchmarking framework. We perform an extensive empirical evaluation of our proposed metric on popular clustering algorithms over a large collection of datasets from different domains, and observe that our new metric leads to several noteworthy observations.
Siddhartha Mishra, Nicholas Monath, Michael Boratko, Ari Kobren, Andrew McCallum
AAAI1
2022 Word2Box: Capturing Set-Theoretic Semantics of Words using Box Embeddings
abstract
Shib Dasgupta, Michael Boratko, Siddhartha Mishra, Shriya Atmakuri, Dhruvesh Patel, Xiang Li, Andrew McCallum. Proceedings of the 60th Annual Meeting of the Association for Computational Linguistics (Volume 1: Long Papers). 2022.
Shib Sankar Dasgupta, Michael Boratko, Siddhartha Mishra, Shriya Atmakuri, Dhruvesh Patel, Xiang Li 0069, Andrew McCallum
ACL (1)3
2022 Super-NaturalInstructions: Generalization via Declarative Instructions on 1600+ NLP Tasks
abstract
Yizhong Wang, Swaroop Mishra, Pegah Alipoormolabashi, Yeganeh Kordi, Amirreza Mirzaei, Atharva Naik, Arjun Ashok, Arut Selvan Dhanasekaran, Anjana Arunkumar, David Stap, Eshaan Pathak, Giannis Karamanolakis, Haizhi Lai, Ishan Purohit, Ishani Mondal, Jacob Anderson, Kirby Kuznia, Krima Doshi, Kuntal Kumar Pal, Maitreya Patel, Mehrad Moradshahi, Mihir Parmar, Mirali Purohit, Neeraj Varshney, Phani Rohitha Kaza, Pulkit Verma, Ravsehaj Singh Puri, Rushang Karia, Savan Doshi, Shailaja Keyur Sampat, Siddhartha Mishra, Sujan Reddy A, Sumanta Patro, Tanay Dixit, Xudong Shen. Proceedings of the 2022 Conference on Empirical Methods in Natural Language Processing. 2022.
Yizhong Wang, Swaroop Mishra, Pegah Alipoormolabashi, Yeganeh Kordi, Amirreza Mirzaei, Atharva Naik, Arjun Ashok, Arut Selvan Dhanasekaran, Anjana Arunkumar, David Stap, Eshaan Pathak, Giannis Karamanolakis, Haizhi Gary Lai, Ishan Purohit, Ishani Mondal, Jacob Anderson, Kirby Kuznia, Krima Doshi, Kuntal Kumar Pal, Maitreya Patel, Mehrad Moradshahi, Mihir Parmar, Mirali Purohit, Neeraj Varshney, Phani Rohitha Kaza, Pulkit Verma 0001, Ravsehaj Singh Puri, Rushang Karia, Savan Doshi, Shailaja Sampat, Siddhartha Mishra, Sujan Reddy A, Sumanta Patro, Tanay Dixit
EMNLP31
2022 Long Expressive Memory for Sequence Modeling
T. Konstantin Rusch, Siddhartha Mishra, N. Benjamin Erichson, Michael W. Mahoney
ICLR2
2022 Graph-Coupled Oscillator Networks
abstract
We propose Graph-Coupled Oscillator Networks (GraphCON), a novel framework for deep learning on graphs. It is based on discretizations of a second-order system of ordinary differential equations (ODEs), which model a network of nonlinear controlled and damped oscillators, coupled via the adjacency structure of the underlying graph. The flexibility of our framework permits any basic GNN layer (e.g. convolutional or attentional) as the coupling function, from which a multi-layer deep neural network is built up via the dynamics of the proposed ODEs. We relate the oversmoothing problem, commonly encountered in GNNs, to the stability of steady states of the underlying ODE and show that zero-Dirichlet energy steady states are not stable for our proposed ODEs. This demonstrates that the proposed framework mitigates the oversmoothing problem. Moreover, we prove that GraphCON mitigates the exploding and vanishing gradients problem to facilitate training of deep multi-layer GNNs. Finally, we show that our approach offers competitive performance with respect to the state-of-the-art on a variety of graph-based learning tasks.
T. Konstantin Rusch, Benjamin Paul Chamberlain, James Rowbottom, Siddhartha Mishra, Michael M. Bronstein
ICML4
2022 Generic bounds on the approximation error for physics-informed (and) operator learning
abstract
We propose a very general framework for deriving rigorous bounds on the approximation error for physics-informed neural networks (PINNs) and operator learning architectures such as DeepONets and FNOs as well as for physics-informed operator learning. These bounds guarantee that PINNs and (physics-informed) DeepONets or FNOs will efficiently approximate the underlying solution or solution-operator of generic partial differential equations (PDEs). Our framework utilizes existing neural network approximation results to obtain bounds on more-involved learning architectures for PDEs. We illustrate the general framework by deriving the first rigorous bounds on the approximation error of physics-informed operator learning and by showing that PINNs (and physics-informed DeepONets and FNOs) mitigate the curse of dimensionality in approximating nonlinear parabolic PDEs.
Tim De Ryck, Siddhartha Mishra
NeurIPS2
2021 Coupled Oscillatory Recurrent Neural Network (coRNN): An accurate and (gradient) stable architecture for learning long time dependencies
T. Konstantin Rusch, Siddhartha Mishra
ICLR2
2021 UnICORNN: A recurrent model for learning very long time dependencies
abstract
The design of recurrent neural networks (RNNs) to accurately process sequential inputs with long-time dependencies is very challenging on account of the exploding and vanishing gradient problem. To overcome this, we propose a novel RNN architecture which is based on a structure preserving discretization of a Hamiltonian system of second-order ordinary differential equations that models networks of oscillators. The resulting RNN is fast, invertible (in time), memory efficient and we derive rigorous bounds on the hidden state gradients to prove the mitigation of the exploding and vanishing gradient problem. A suite of experiments are presented to demonstrate that the proposed RNN provides state of the art performance on a variety of learning tasks with (very) long-time dependencies.
T. Konstantin Rusch, Siddhartha Mishra
ICML2
2021 On Universal Approximation and Error Bounds for Fourier Neural Operators
abstract
Fourier neural operators (FNOs) have recently been proposed as an effective framework for learning operators that map between infinite-dimensional spaces. We prove that FNOs are universal, in the sense that they can approximate any continuous operator to desired accuracy. Moreover, we suggest a mechanism by which FNOs can approximate operators associated with PDEs efficiently. Explicit error bounds are derived to show that the size of the FNO, approximating operators associated with a Darcy type elliptic PDE and with the incompressible Navier-Stokes equations of fluid dynamics, only increases sub (log)-linearly in terms of the reciprocal of the error. Thus, FNOs are shown to efficiently approximate operators arising in a large class of PDEs.
Nikola B. Kovachki, Samuel Lanthaler, Siddhartha Mishra
J. Mach. Learn. Res.3
2021 On the approximation of functions by tanh neural networks
abstract
We derive bounds on the error, in high-order Sobolev norms, incurred in the approximation of Sobolev-regular as well as analytic functions by neural networks with the hyperbolic tangent activation function. These bounds provide explicit estimates on the approximation error with respect to the size of the neural networks. We show that tanh neural networks with only two hidden layers suffice to approximate functions at comparable or better rates than much deeper ReLU neural networks.
Tim De Ryck, Samuel Lanthaler, Siddhartha Mishra
Neural Networks3