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Christian Zwieb

dblp:08/4447 · DBLP profile ↗
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1ranked-venue papers
0as first author
0since 2021 · last 2001
—ORCID · none

Domains — the database's venue-derived domains; a paper can count in several

Applied, interdisciplinary, general and emerging computing · 1

Expertise — from the expertise taxonomy: the topics of the expert's papers under the CCF categories. A weight counts papers with recency: 1 for a paper about the topic, 0.3 when the topic is its context, halved every five years.

Interdisciplinary, comprehensive, and emerging computing
1 paper
Bioinformatics and computational biology · 100%

Topics — the 3 heaviest of 3, each with the papers that count most for it

TopicWeightPapersLastEvidence papers
Bioinformatics and computational biology › structural bioinformatics › nucleic acid structure analysis
RNA structural alignment		 0.012001
Semi-automated update and cleanup of structural RNA alignment databases · Bioinform. 2001
Bioinformatics and computational biology › RNA biology › RNA analysis › RNA bioinformatics
RNA structure		 0.012001
Semi-automated update and cleanup of structural RNA alignment databases · Bioinform. 2001
Bioinformatics and computational biology › biological database
sequence database curation		 0.012001
Semi-automated update and cleanup of structural RNA alignment databases · Bioinform. 2001

Methods — techniques the papers use, named apart from their topics

phylogenetic support analysis · 0.0BLAST · 0.0
YearPublicationVenuePosition
2001 Semi-automated update and cleanup of structural RNA alignment databases
abstract
UNLABELLED: We have developed a series of programs which assist in maintenance of structural RNA databases. A main program BLASTs the RNA database against GenBank and automatically extends and realigns the sequences to include the entire range of the RNA query sequences. After manual update of the database, other programs can examine base pair consistency and phylogenetic support. The output can be applied iteratively to refine the structural alignment of the RNA database. Using these tools, the number of potential misannotations per sequence was reduced from 20 to 3 in the Signal Recognition Particle RNA database. AVAILABILITY: A quick-server and programs are available at http://www.bioinf.au.dk/rnadbtool/
Jan Gorodkin, Christian Zwieb, Bjarne Knudsen
 Bioinform.2