Advanced volumetric imaging methods and genetically encoded activity indicators have permitted a comprehensive characterization of whole brain activity at single neuron resolution in Caenorhabditis elegans. The constant motion and deformation of the nematode nervous system, however, impose a great challenge for consistent identification of densely packed neurons in a behaving animal. Here, we propose a cascade solution for long-term and rapid recognition of head ganglion neurons in a freely moving C. elegans. First, potential neuronal regions from a stack of fluorescence images are detected by a deep learning algorithm. Second, 2-dimensional neuronal regions are fused into 3-dimensional neuron entities. Third, by exploiting the neuronal density distribution surrounding a neuron and relative positional information between neurons, a multi-class artificial neural network transforms engineered neuronal feature vectors into digital neuronal identities. With a small number of training samples, our bottom-up approach is able to process each volume-1024 × 1024 × 18 in voxels-in less than 1 second and achieves an accuracy of 91% in neuronal detection and above 80% in neuronal tracking over a long video recording. Our work represents a step towards rapid and fully automated algorithms for decoding whole brain activity underlying naturalistic behaviors.

This paper aims to explain adversarial attacks in terms of how adversarial perturbations contribute to the attacking task. We estimate attributions of different image regions to the decrease of the attacking cost based on the Shapley value. We define and quantify interactions among adversarial perturbation pixels, and decompose the entire perturbation map into relatively independent perturbation components. The decomposition of the perturbation map shows that adversarially-trained DNNs have more perturbation components in the foreground than normally-trained DNNs. Moreover, compared to the normally-trained DNN, the adversarially-trained DNN have more components which mainly decrease the score of the true category. Above analyses provide new insights into the understanding of adversarial attacks.

This paper provides a unified view to explain different adversarial attacks and defense methods, i.e. the view of multi-order interactions between input variables of DNNs. Based on the multi-order interaction, we discover that adversarial attacks mainly affect high-order interactions to fool the DNN. Furthermore, we find that the robustness of adversarially trained DNNs comes from category-specific low-order interactions. Our findings provide a potential method to unify adversarial perturbations and robustness, which can explain the existing robustness-boosting methods in a principle way. Besides, our findings also make a revision of previous inaccurate understanding of the shape bias of adversarially learned features. Our code is available online at https://github.com/Jie-Ren/A-Unified-Game-Theoretic-Interpretation-of-Adversarial-Robustness.

in a conv-layer usually represents a mixture of object parts. We develop a simple yet effective method to learn an explanatory graph, which automatically disentangles object parts from each filter without any part annotations. Specifically, given the feature map of a filter, we mine neural activations from the feature map, which correspond to different object parts. The explanatory graph is constructed to organize each mined part as a graph node. Each edge connects two nodes, whose corresponding object parts usually co-activate and keep a stable spatial relationship. Experiments show that each graph node consistently represented the same object part through different images, which boosted the transferability of CNN features. The explanatory graph transferred features of object parts to the task of part localization, and our method significantly outperformed other approaches.

This paper proposes a generic method to learn interpretable convolutional filters in a deep convolutional neural network (CNN) for object classification, where each interpretable filter encodes features of a specific object part. Our method does not require additional annotations of object parts or textures for supervision. Instead, we use the same training data as traditional CNNs. Our method automatically assigns each interpretable filter in a high conv-layer with an object part of a certain category during the learning process. Such explicit knowledge representations in conv-layers of the CNN help people clarify the logic encoded in the CNN, i.e., answering what patterns the CNN extracts from an input image and uses for prediction. We have tested our method using different benchmark CNNs with various architectures to demonstrate the broad applicability of our method. Experiments have shown that our interpretable filters are much more semantically meaningful than traditional filters.