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Jeff Jacobs

dblp:134/4015 · DBLP profile ↗
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5ranked-venue papers
0as first author
3since 2021 · last 2023
0000-0001-8728-3450ORCID · reported

Domains — the database's venue-derived domains; a paper can count in several

Applied, interdisciplinary, general and emerging computing · 4 · 3 since 2021Artificial intelligence and machine learning · 1Databases, data management, data science and information retrieval · 1

Expertise — from the expertise taxonomy: the topics of the expert's papers under the CCF categories. A weight counts papers with recency: 1 for a paper about the topic, 0.3 when the topic is its context, halved every five years.

Databases, data mining, and information retrieval
1 paper
Information retrieval · 100%
Computer graphics and multimedia
1 paper
Visualization and visual analytics · 100%

Topics — the 4 heaviest of 5, each with the papers that count most for it

TopicWeightPapersLastEvidence papers
Information retrieval › text summarization
structured summarization
0.212013
Information cartography: creating zoomable, large-scale maps of information · KDD 2013
Information retrieval
text summarization
0.212013
Information cartography: creating zoomable, large-scale maps of information · KDD 2013
Visualization and visual analytics › geospatial visualization
metro map visualization
0.212013
Information cartography: creating zoomable, large-scale maps of information · KDD 2013
Visualization and visual analytics
visual analytics
0.212013
Information cartography: creating zoomable, large-scale maps of information · KDD 2013

Methods — techniques the papers use, named apart from their topics

zoomable metro maps · 0.3
YearPublicationVenuePosition
2023 VACtrac: enhancing access immunization registry data for population outreach using the Bulk Fast Healthcare Interoperable Resource (FHIR) protocol
abstract
COVID-19 vaccination uptake has been suboptimal, even in high-risk populations. New approaches are needed to bring vaccination data to the groups leading outreach efforts. This article describes work to make state-level vaccination data more accessible by extending the Bulk Fast Healthcare Interoperability Resource (FHIR) standard to better support the repeated retrieval of vaccination data for coordinated outreach efforts. We also describe a corresponding low-foot-print software for population outreach that automates repeated checks of state-level immunization data and prioritizes outreach by social determinants of health. Together this software offers an integrated approach to addressing vaccination gaps. Several extensions to the Bulk FHIR protocol were needed to support bulk query of immunization records. These are described in detail. The results of a pilot study, using the outreach tool to target a population of 1500 patients are also described. The results confirmed the limitations of current patient-by-patient approach for querying state immunizations systems for population data and the feasibility of a Bulk FHIR approach.
Leslie Lenert, Jeff Jacobs, James Agnew, Katie G. Kirchoff, Duncan Weatherston, Kenneth R. Deans Jr.
J. Am. Medical Informatics Assoc.2
2021 Informatics for public health and health system collaboration: Applications for the control of the current COVID-19 pandemic and the next one
abstract
Public health faces unprecedented challenges in its efforts to control COVID-19 through a national vaccination campaign. Addressing these challenges will require fundamental changes to public health data systems. For example, of the core data systems for immunization campaigns is the immunization information system (IIS); however, IISs were designed for tracking the vaccinated, not finding the patients who are high risk and need to be vaccinated. Health systems have this data in their electronic health records (EHR) systems and often have a greater capacity for outreach. Clearly, a partnership is needed. However, successful collaborations will require public health to change from its historical hierarchical information supply chain model to an ecosystem model with a peer-to-peer exchange with population health providers. Examples of the types of informatics innovations necessary to support such an ecosystem include a national patient identifier, population-level data exchange for immunization data, and computable electronic quality measures. Rather than think of these components individually, a comprehensive approach to rapidly adaptable tools for collaboration is needed.
Leslie Lenert, Jeff Jacobs
J. Am. Medical Informatics Assoc.3
2021 Automated production of research data marts from a canonical fast healthcare interoperability resource data repository: applications to COVID-19 research
abstract
OBJECTIVE: The rapidly evolving COVID-19 pandemic has created a need for timely data from the healthcare systems for research. To meet this need, several large new data consortia have been developed that require frequent updating and sharing of electronic health record (EHR) data in different common data models (CDMs) to create multi-institutional databases for research. Traditionally, each CDM has had a custom pipeline for extract, transform, and load operations for production and incremental updates of data feeds to the networks from raw EHR data. However, the demands of COVID-19 research for timely data are far higher, and the requirements for updating faster than previous collaborative research using national data networks have increased. New approaches need to be developed to address these demands. METHODS: In this article, we describe the use of the Fast Healthcare Interoperability Resource (FHIR) data model as a canonical data model and the automated transformation of clinical data to the Patient-Centered Outcomes Research Network (PCORnet) and Observational Medical Outcomes Partnership (OMOP) CDMs for data sharing and research collaboration on COVID-19. RESULTS: FHIR data resources could be transformed to operational PCORnet and OMOP CDMs with minimal production delays through a combination of real-time and postprocessing steps, leveraging the FHIR data subscription feature. CONCLUSIONS: The approach leverages evolving standards for the availability of EHR data developed to facilitate data exchange under the 21st Century Cures Act and could greatly enhance the availability of standardized datasets for research.
Leslie Lenert, Andrey V. Ilatovskiy, James Agnew, Patricia Rudisill, Jeff Jacobs, Duncan Weatherston, Kenneth R. Deans Jr.
J. Am. Medical Informatics Assoc.5
2018 Risk Prediction for One-Year Transplant-Free Survival following Pre-Norwood Procedure Based on the Pre-Operative Data
Ali Jalali, Jacquelin Peck, Nhue Do, Monesha Gupta, Sharon Ghazarian, Mohamed A. Rehman, Jeff Jacobs, Luis M. Ahumada
AMIA7
2013 Information cartography: creating zoomable, large-scale maps of information
abstract
In an era of information overload, many people struggle to make sense of complex stories, such as presidential elections or economic reforms. We propose a methodology for creating structured summaries of information, which we call zoomable metro maps. Just as cartographic maps have been relied upon for centuries to help us understand our surroundings, metro maps can help us understand the information landscape.
Dafna Shahaf, Jaewon Yang, Caroline Suen, Jeff Jacobs, Heidi Wang, Jure Leskovec
KDD4