Christian Bendixen

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EDBT 2026 Demo / reviewers in the wild / expert

dblp:14/6265 · DBLP profile ↗

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1ranked-venue papers

0as first author

0since 2021 · last 2004

—ORCID · unresolved

Domains — the database's venue-derived domains; a paper can count in several

Applied, interdisciplinary, general and emerging computing · 1

Expertise — from the expertise taxonomy: the topics of the expert's papers under the CCF categories. A weight counts papers with recency: 1 for a paper about the topic, 0.3 when the topic is its context, halved every five years.

Interdisciplinary, comprehensive, and emerging computing

1 paper

Bioinformatics and computational biology · 100%

Topics — the 3 heaviest of 3, each with the papers that count most for it

Topic	Papers	Last	Evidence papers
Bioinformatics and computational biology › molecular property prediction melting temperature prediction	1	2004	SEPON, a Selection and Evaluation Pipeline for OligoNucleotides based on ESTs with a non-target Tm algorithm for reducing cross-hybridization in microarray gene expression experiments · Bioinform. 2004
Bioinformatics and computational biology microarray probe design	1	2004	SEPON, a Selection and Evaluation Pipeline for OligoNucleotides based on ESTs with a non-target Tm algorithm for reducing cross-hybridization in microarray gene expression experiments · Bioinform. 2004
Bioinformatics and computational biology › synthetic biology › oligonucleotide design oligonucleotide selection	1	2004	SEPON, a Selection and Evaluation Pipeline for OligoNucleotides based on ESTs with a non-target Tm algorithm for reducing cross-hybridization in microarray gene expression experiments · Bioinform. 2004

Methods — techniques the papers use, named apart from their topics

expressed sequence tag analysis · 0.0

Year	Publication	Venue	Position
2004	SEPON, a Selection and Evaluation Pipeline for OligoNucleotides based on ESTs with a non-target Tm algorithm for reducing cross-hybridization in microarray gene expression experiments abstract Abstract Summary: SEPON, Selection and Evaluation Pipeline for OligoNucleotide generates n-mer oligonucleotide sequences from expressed sequence tags of non-annotated genomes for microarray gene-expression profiling. A non-target melting temperature (Tm) algorithm will reduce cross-hybridization by estimating Tm of oligonucleotide hybridization to non-specific targets (non-target Tm) and discard oligonucleotides with non-target Tm estimate above user-defined threshold. SEPON allows user-defined filtering, predicts exon location, assigns penalty based on 3′ distance, GC content, secondary structure Tm and non-target Tm and ranks oligonucleotides for optimal selection. Availability: The program is freely available for non-commercial and academic use under the GNU General Public License and is obtained upon request to authors. Supplementary information: http://www.agrsci.dk/hag/sepon/ Henrik Hornshøj, Henrik Stengaard, Frank Panitz, Christian Bendixen	Bioinform.	4