Demo Data from EDBT 2026 / reviewers in the wild / expert
Susan Rosser
dblp:147/8921
· DBLP profile ↗
2ranked-venue papers
0as first author
0since 2021 · last 2020
—ORCID · none
Domains — the database's venue-derived domains; a paper can count in several
Applied, interdisciplinary, general and emerging computing · 2
Expertise — from the expertise taxonomy: the topics of the expert's papers under the CCF categories. A weight counts papers with recency: 1 for a paper about the topic, 0.3 when the topic is its context, halved every five years.
| Interdisciplinary, comprehensive, and emerging computing
2 papers |
Bioinformatics and computational biology · 100% |
Topics — the 2 heaviest of 2, each with the papers that count most for it
| Topic | Weight | Papers | Last | Evidence papers |
|---|---|---|---|---|
Bioinformatics and computational biology › synthetic biology
DNA sequence design |
0.4 | 1 | 2020 | DNA Chisel, a versatile sequence optimizer · Bioinform. 2020 |
Bioinformatics and computational biology › genome annotation
sequence annotation visualization |
0.4 | 1 | 2020 | DNA Features Viewer: a sequence annotation formatting and plotting library for Python · Bioinform. 2020 |
Methods — techniques the papers use, named apart from their topics
multi-objective optimization · 0.4layout optimization · 0.4
| Year | Publication | Venue | Position |
|---|---|---|---|
| 2020 | DNA Features Viewer: a sequence annotation formatting and plotting library for PythonabstractMOTIVATION: Although the Python programming language counts many Bioinformatics and Computational Biology libraries; none offers customizable sequence annotation visualizations with layout optimization. RESULTS: DNA Features Viewer is a sequence annotation plotting library which optimizes plot readability while letting users tailor other visual aspects (colors, labels, highlights etc.) to their particular use case. AVAILABILITY AND IMPLEMENTATION: Open-source code and documentation are available on Github under the MIT license (https://github.com/Edinburgh-Genome-Foundry/DnaFeaturesViewer). SUPPLEMENTARY INFORMATION: Supplementary data are available at Bioinformatics online. Valentin Zulkower, Susan Rosser |
Bioinform. | 2 |
| 2020 | DNA Chisel, a versatile sequence optimizerabstractMOTIVATION: Accounting for biological and practical requirements in DNA sequence design often results in challenging optimization problems. Current software solutions are problem-specific and hard to combine. RESULTS: DNA Chisel is an easy-to-use, easy-to-extend sequence optimization framework allowing to freely define and combine optimization specifications via Python scripts or Genbank annotations. AVAILABILITY AND IMPLEMENTATION: The framework is available as a web application (https://cuba.genomefoundry.org/sculpt_a_sequence) or open-source Python library (see at https://github.com/Edinburgh-Genome-Foundry/DNAChisel for code and documentation). SUPPLEMENTARY INFORMATION: Supplementary data are available at Bioinformatics online. Valentin Zulkower, Susan Rosser, Yann Ponty |
Bioinform. | 2 |