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Swati Varshney

dblp:155/9638 · DBLP profile ↗
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2ranked-venue papers
0as first author
1since 2021 · last 2021
—ORCID · conflict

Domains — the database's venue-derived domains; a paper can count in several

Graphics, computer vision, multimedia, augmented reality and games · 1Applied, interdisciplinary, general and emerging computing · 1 · 1 since 2021

Expertise — from the expertise taxonomy: the topics of the expert's papers under the CCF categories. A weight counts papers with recency: 1 for a paper about the topic, 0.3 when the topic is its context, halved every five years.

Interdisciplinary, comprehensive, and emerging computing
1 paper
Bioinformatics and computational biology · 100%
Computer graphics and multimedia
1 paper
Computational fabrication · 50% Geometric modeling and processing · 50%

Topics — the 1 heaviest of 3, each with the papers that count most for it

TopicWeightPapersLastEvidence papers
Bioinformatics and computational biology › proteomics
phosphoproteomics
0.512021
Phosphomatics: interactive interrogation of substrate-kinase networks in global phosphoproteomics datasets · Bioinform. 2021

Methods — techniques the papers use, named apart from their topics

network interrogation · 0.5mass spectrometry data analysis · 0.5
YearPublicationVenuePosition
2021 Phosphomatics: interactive interrogation of substrate-kinase networks in global phosphoproteomics datasets
abstract
MOTIVATION: Mass spectrometry-based phosphoproteomics can routinely identify and quantify thousands of phosphorylated peptides from a single experiment. However interrogating possible upstream kinases and identifying key literature for phosphorylation sites is laborious and time-consuming. RESULTS: Here, we present Phosphomatics-a publicly available web resource for interrogating phosphoproteomics data. Phosphomatics allows researchers to upload phosphoproteomics data and interrogate possible relationships from a substrate-, kinase- or pathway-centric viewpoint. AVAILABILITY AND IMPLEMENTATION: Phosphomatics is freely available via the internet at: https://phosphomatics.com. SUPPLEMENTARY INFORMATION: Supplementary data are available at Bioinformatics online.
Michael G. Leeming, Sean O'Callaghan, Luana Licata, Marta Iannuccelli, Prisca Lo Surdo, Elisa Micarelli, Ching-Seng Ang, Shuai Nie 0003, Swati Varshney, Sadia Ameen, Heung-Chin Cheng, Nicholas A. Williamson
Bioinform.9
2015 MetaMesh: A hierarchical computational model for design and fabrication of biomimetic armored surfaces
Jorge Duro-Royo, Katia Zolotovsky, Laia Mogas-Soldevila, Swati Varshney, Neri Oxman, Mary C. Boyce, Christine Ortiz
Comput. Aided Des.4