Xueyu Liu

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21ranked-venue papers
5as first author
21since 2021 · last 2026
—ORCID · conflict

Domains — the database's venue-derived domains; a paper can count in several

Artificial intelligence and machine learning · 13 · 2 first-author · 13 since 2021Graphics, computer vision, multimedia, augmented reality and games · 5 · 2 first-author · 5 since 2021Applied, interdisciplinary, general and emerging computing · 5 · 3 first-author · 5 since 2021
YearPublicationVenuePosition
2026 Dual-stream attention-guided learning for weakly supervised whole slide image classification
Daoxi Cao, Hangbei Cheng, Yijin Li, Ruolin Zhou, Xuehan Zhang, Binwei Li, Xuancheng Gu, Xueyu Liu, Yongfei Wu
Eng. Appl. Artif. Intell.10
2026 Explainable AI in Medicine: A Comprehensive Narrative Review of Methods, Applications, and Future Directions
abstract
ABSTRACT Artificial Intelligence (AI) is increasingly utilised in medicine; however, its “black‐box” nature continues to hinder clinical trust, adoption, and validation. Explainable AI (XAI) has emerged as a critical field to address these transparency challenges by making AI‐driven decisions more interpretable and actionable. This narrative review examines the progress of XAI in medicine over the past decade. We first introduce fundamental XAI concepts and describe our review methodology, followed by a comprehensive analysis of key application domains, including medical imaging, electronic health records (EHRs), and multi‐omics data. Methodologically, we categorise XAI techniques into model‐agnostic approaches (e.g., SHAP, LIME, Anchors) and model‐specific approaches (e.g., Grad‐CAM, LRP, TreeSHAP). Beyond summarising their principles, advantages, and limitations, we further provide a systematic analysis of clinical reliability and failure modes associated with each class of methods, highlighting how explanation techniques may produce misleading, unstable, or non‐causal interpretations in real‐world clinical settings. The review then discusses the demonstrated benefits of XAI, including result validation, bias detection, and improved patient–clinician communication, while critically examining persistent challenges such as limited clinical deployment, inconsistent evaluation standards, and the lack of prospective validation. Finally, we outline future research directions, emphasising the need to adapt XAI to large‐scale foundation models and conversational AI systems, as well as to extend its applicability in biomedical and multi‐omics interpretation. We argue that while XAI is essential for improving transparency, trust, and clinical adoption, its reliable and scalable integration into clinical workflows requires both methodological innovation and rigorous, clinically grounded validation frameworks.
Helin Wang, Xueyu Liu, Jiashuo Shi, Yu-ang Li, Guanghui Yue 0001, Yongfei Wu
Expert Syst. J. Knowl. Eng.3
2026 TriS -Net: A Progressive Learning Framework for Medical Image Segmentation With Multigranularity Supervision
abstract
ABSTRACT Accurate medical image segmentation is essential for disease diagnosis, treatment planning and outcome monitoring. However, current segmentation methods heavily rely on large‐scale, pixel‐level annotations, which are costly and labour‐intensive to obtain. To address this challenge, we propose TriS‐Net (Triple‐Supervision Segmentation Network) , a progressive framework that integrates image‐level, bounding box‐level and pixel‐level labels into a multigranularity supervision pipeline under limited annotation settings. In the first stage, TriS‐Net uses image‐level labels to train a classification branch, enabling the network to learn discriminative features and localise potential lesion regions. In the second stage, a box‐guided mask refinement strategy (BMR) is proposed, which combines Soft‐NMS filtering and a one‐to‐one matching mechanism to obtain reliable candidate regions. CIoU is further employed to derive image‐level quality metrics that impose quality‐aware weighted constraints on segmentation learning, thereby improving spatial localisation and structural consistency. In the third stage, a small number of pixel‐level labels are used for fine‐grained supervision, further enhancing segmentation accuracy and boundary details. The proposed method is validated on the BraTS 2019 and LiTS 2017 datasets, on which it outperforms several existing methods under limited annotation settings. Additional experiments on the BUSI ultrasound dataset further demonstrate its good generalisation capability across different imaging modalities.
Xueyu Liu, Junxin Chen 0001, Guanghui Yue 0001, Yongfei Wu
Expert Syst. J. Knowl. Eng.4
2026 SAM-APG: Prompt-guided self-training framework based on SAM for nuclei segmentation with limited annotations
Xiaoxu Yao, Yexin Lai, Xueyu Liu, Yongfei Wu
Expert Syst. Appl.3
2026 FMaMIL: Synergistic spatial-frequency Mamba multi-instance learning for weakly supervised pathology lesion segmentation
Hangbei Cheng, Xiaorong Dong, Guangze Shi 0001, Xueyu Liu, Xuetao Ma 0001, Mingqiang Wei, Junxin Chen 0001, Yongfei Wu
Pattern Recognit.5
2025 Plug-and-Play PPO: An Adaptive Point Prompt Optimizer Making SAM Greater
abstract
Powered by extensive curated training data, the Segment Anything Model (SAM) demonstrates impressive generalization capabilities in open-world scenarios, effectively guided by user-provided prompts. However, the classagnostic characteristic of SAM renders its segmentation accuracy highly dependent on prompt quality. In this paper, we propose a novel plug-and-play dual-space Point Prompt Optimizer (PPO) designed to enhance prompt distribution through deep reinforcement learning (DRL)-based heterogeneous graph optimization. PPO optimizes initial prompts for any task without requiring additional training, thereby improving SAM’s downstream segmentation performance. Specifically, PPO constructs a dual-space heterogeneous graph, leveraging the robust feature-matching capabilities of a foundational pre-trained model to create internal feature and physical distance matrices. A DRL policy network iteratively refines the distribution of prompt points, optimizing segmentation predictions. We conducted experiments on four public datasets. The ablation study explores the necessity and balance of optimizing prompts in both feature and physical spaces. The comparative study shows that PPO enables SAM to surpass recent one-shot methods. Additionally, experiments with different initial prompts demonstrate PPO’s generality across prompts generated by various methods. In conclusion, PPO redefines the prompt optimization problem as a heterogeneous graph optimization task, using DRL to construct an effective, plugand-play prompt optimizer. This approach holds potential for broader applications across diverse segmentation tasks and provides a promising solution for point prompt optimization. The source code and demo are available at https://github.com/XueyuLiu/PPO.
Xueyu Liu, Yexin Lai, Guangze Shi 0001, Feixue Shao, Fang Hao, Yongfei Wu
CVPR1
2025 Fourier Transform-Based Shape Constrained Framework for Generalizable Medical Image Segmentation
Jun Zhang 0095, Xueyu Liu, Guangze Shi 0001, Feixue Shao, Hangbei Cheng, Yongfei Wu
PRCV (13)3
2025 Multi-task cyclical consistency learning based medical image segmentation
Le Han, Xueyu Liu, Guanghui Yue 0001, Mingqiang Wei, Yongfei Wu
Eng. Appl. Artif. Intell.4
2025 GLMKD: Joint global and local mutual knowledge distillation for weakly supervised lesion segmentation in histopathology images
Hangbei Cheng, Xueyu Liu, Jun Zhang 0095, Xiaorong Dong, Xuetao Ma 0001, Xing Chen 0017, Guanghui Yue 0001, Yidi Li 0001, Yongfei Wu
Expert Syst. Appl.2
2025 Segment Any Tissue: One-shot reference guided training-free automatic point prompting for medical image segmentation
Xueyu Liu, Guangze Shi 0001, Yexin Lai, Weixia Han, Yongfei Wu
Medical Image Anal.1
2025 Multi-instance curriculum learning for histopathology image classification with bias reduction
Zihao Mi, Xueyu Liu, Guanghui Yue 0001, Junhong Yue, Mingqiang Wei, Yidi Li 0001, Yongfei Wu
Medical Image Anal.3
2025 MSMTSeg: Multi-Stained Multi-Tissue Segmentation of Kidney Histology Images via Generative Self-Supervised Meta-Learning Framework
abstract
Accurately diagnosing chronic kidney disease requires pathologists to assess the structure of multiple tissues under different stains, a process that is time-consuming and labor-intensive. Current AI-based methods for automatic structure assessment, like segmentation, often demand extensive manual annotation and focus on single stain domain. To address these challenges, we introduce MSMTSeg, a generative self-supervised meta-learning framework for multi-stained multi-tissue segmentation in renal biopsy whole slide images (WSIs). MSMTSeg incorporates multiple stain transform models for style translation of inter-stain domains, a self-supervision module for obtaining pre-trained models with the domain-specific feature representation, and a meta-learning strategy that leverages generated virtual data and pre-trained models to learn the domain-invariant feature representation across multiple stains, thereby enhancing segmentation performance. Experimental results demonstrate that MSMTSeg achieves superior and robust performance, with mDSC of 0.836 and mIoU of 0.718 for multiple tissues under different stains, using only one annotated training sample for each stain. Our ablation study confirms the effectiveness of each component, positioning MSMTSeg ahead of classic advanced segmentation networks, recent few-shot segmentation methods, and unsupervised domain adaptation methods. In conclusion, our proposed few-shot cross-domain technology offers a feasible and cost-effective solution for multi-stained renal histology segmentation, providing convenient assistance to pathologists in clinical practice.
Xueyu Liu, Rui Wang 0178, Yexin Lai, Yongfei Wu, Hangbei Cheng, Yuanyue Lu, Chenglong Ban, Shuqin Tang, Yuxuan Yang 0011
IEEE J. Biomed. Health Informatics1
2024 Multi-instance Curriculum Learning for Histopathology Image Classifications with Hard Negative Mining and Positive Augmentation
abstract
Multi-instance learning (MIL) exhibits advanced and surpassed capabilities in understanding and recognizing complex patterns within gigapixel histopathological images. However, the currents MIL methods for the analysis of the histopathological image still give rise to two main concerns. On one hand, vanilla MIL methods intuitively focus on identifying key instances (easy-to-classify) without considering hard-to-classify instances, which is biased and prone to produce false positive instance. On the other hand, since the positive tissue occupies only a small fraction of histopathological images, it is commonly suffer from class imbalance between positive and negative instances, causing the MIL model to overly focus on the majority class. In light of these issues of bias learning, we propose a multi-instance curriculum learning method that collaboratively incorporates hard negative instance mining and positive instance augmentation to improve model’s classification performance. Specifically, we first initialize the MIL model using easy-to-classify instances, then we mine the hard negative instances (hard-to-classify) and augment the positive instances via the diffusion model. Finally, the MIL model is retrained with memory rehearsal method by combining the mined negative instances and augmented positive instances. Technically, the diffusion model is first designed to generate lesion instances, which optimally augment diverse features to reflect the realistic positive samples with post screening scenario. Extensive experimental results show that the proposed method alleviates model bias in MIL and yields improvements over the state-of-the-art methods on both public datasets and private dataset.
Zihao Mi, Xueyu Liu, Guangze Shi 0001, Yidi Li 0001, Yongfei Wu
BIBM2
2024 Feature-Prompting GBMSeg: One-Shot Reference Guided Training-Free Prompt Engineering for Glomerular Basement Membrane Segmentation
Xueyu Liu, Guangze Shi 0001, Yexin Lai, Lele Sun, Quan Yang, Yongfei Wu, Weixia Han
MICCAI (9)1
2024 Multi-scale multi-instance contrastive learning for whole slide image classification
Fang Hao, Xueyu Liu, Shupei Yao, Yongfei Wu
Eng. Appl. Artif. Intell.3
2024 Transformer based multiple superpixel-instance learning for weakly supervised segmenting lesions of interstitial lung disease
Yexin Lai, Xueyu Liu, Linning E, Yujing Cheng, Yongfei Wu
Expert Syst. Appl.2
2024 Double similarities weighted multi-instance learning kernel and its application
Yongfei Wu, Fang Hao, Xueyu Liu, Daoxiang Zhou
Expert Syst. Appl.4
2024 Graph-Based Multi-Feature Fusion Method for Speech Emotion Recognition
abstract
Exploring proper way to conduct multi-speech feature fusion for cross-corpus speech emotion recognition is crucial as different audio features could provide complementary cues reflecting human emotion status. Speech emotion recognition allows computers to analyze the specific emotional condition of the speaker through speech, which is of great significance to the development of human–computer interaction technology. While most previous approaches only extract a single speech feature for emotion recognition, existing fusion methods such as concatenation, parallel connection, and splicing ignore heterogeneous patterns in the interaction between features and features, resulting in performance of existing systems. In this paper, we propose a novel graph-based fusion method to explicitly model the relationships between every pair of audio features, which provides a new research idea for speech feature fusion. Specifically, we propose a multi-dimensional edge features learning strategy called graph-based multi-feature fusion method for speech emotion recognition. It represents each speech feature as a node and learns multi-dimensional edge features to explicitly describe the relationship between each feature-feature pair in the context of emotion recognition. This way, the learned multi-dimensional edge features encode speech feature-level information from both the vertex and edge dimensions. Our approach consists of three modules: an Audio Feature Generation (AFG) module, an Audio-Feature Multi-dimensional Edge Feature (AMEF) module and a Speech Emotion Recognition (SER) module. The proposed methodology yielded satisfactory outcomes on the SEWA dataset. Furthermore, the method demonstrated enhanced performance compared to the baseline in the AVEC 2019 Workshop and Challenge. We used data from two cultures as our training and validation sets: two cultures containing German and Hungarian on the SEWA dataset, the CCC scores for German are improved by 17.28% for arousal and 7.93% for liking, and for Hungarian, the CCC scores are improved by 11.15% for arousal and 131.11% for valence. The outcomes of our methodology demonstrate a 13% improvement over alternative fusion techniques, including those employing one-dimensional edge-based feature fusion approach. The experiments on some parts of the Aff-Wild 2 dataset demonstrate that our approach exhibits a certain degree of generalizability and robustness. Code is available at https://github.com/ChaosWang666/Graph-based-multi-Feature-fusion-method .
Xueyu Liu, Chao Wang 0115
Int. J. Pattern Recognit. Artif. Intell.1
2024 Classification and quantification of glomerular spike-like projections via deep residual multiple instance learning with multi-scale annotation
Xueyu Liu, Fang Hao, Yongfei Wu
Multim. Tools Appl.2
2023 Ada-CCFNet: Classification of multimodal direct immunofluorescence images for membranous nephropathy via adaptive weighted confidence calibration fusion network
Ruili Wang 0009, Xueyu Liu, Fang Hao, Dan Niu, Yongfei Wu
Eng. Appl. Artif. Intell.2
2023 Prediction of breast cancer metastasis by deep learning pathology
abstract
Abstract With the rapid development of social economy, the incidence of breast cancer is increasing year by year. Whether there is lymph node metastasis in frozen tissue sections during breast cancer surgery is of tremendous priority for breast cancer surgical decision‐making. Therefore, it is very significant to diagnose the pathological sections of breast cancer quickly and accurately. In this study, a model which can quickly fine segmentation of lesion regions in high‐resolution breast cancer pathology sections is proposed. Firstly, pathology sections are processed by pre‐processing module; Secondly, the main lesion region in pathology sections can be quickly recognized by recognition module; Thirdly, the fine segmentation of lesion region can be accomplished by segmentation module. The dataset is selected from two medical institutions to evaluate the proposed model; it achieved the average recognition precision of 0.936 for region of interest in high‐resolution pathology section, with an F1‐score of 0.787; and the dice for lesion region segmentation is 0.8517. The proposed model outperforms several similar works, which can effectively improve the speed and precision of pathologist's diagnosis for high‐resolution breast cancer pathology sections.
Yuanyue Lu, Xueyu Liu, Wangxing Li, Rongshan Li
IET Image Process.3