Ismail Emre Araci

dblp:164/8877 · DBLP profile ↗
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6ranked-venue papers
1as first author
3since 2021 · last 2024
0000-0002-1327-9229ORCID · corroborated

Domains — the database's venue-derived domains; a paper can count in several

Systems, architecture and hardware · 6 · 1 first-author · 3 since 2021
YearPublicationVenuePosition
2024 Late Breaking Results: Efficient Built-in Self-Test for Microfluidic Large-Scale Integration (mLSI)
abstract
Control channels on microfluidic large-scale integration (mLSI) chips are prone to blockage and leakage defects. In this work, we propose a built-in self-test (BIST) method that drastically improves the test efficiency. Given n to-be-tested control channels, we reduced the number of test patterns for blockage and leakage tests from [EQUATION] to 1, and from ⌈log2(n + 1)⌉ to ⌈log2(χ(G) + 1)⌉, respectively, where χ(G) denotes the vertex chromatic number of a graph G consisting of n vertices. We fabricated our design and demonstrated the feasibility and efficiency of our method.
Mengchu Li, Hanchen Gu, Yushen Zhang, Siyuan Liang 0002, Hudson Gasvoda, Rana Altay, Ismail Emre Araci, Tsun-Ming Tseng, Tsung-Yi Ho, Ulf Schlichtmann
DAC7
2024 LaMUX: Optimized Logic-Gate-Enabled High-Performance Microfluidic Multiplexer Design
abstract
After decades of development, flow-based microfluidic biochips have become an increasingly attractive platform for biochemical experiments. The fluid transportation and the on-chip device operation are controlled by microvalves, which are driven by external pneumatic controllers. To meet the increasingly complex experimental demands, the number of microvalves has significantly increased, making it necessary to adopt multiplexers (MUXes) for the actuation of microvalves. However, existing MUX designs have limited coding capacities, resulting in area overhead and excessive chip-to-world interface. This paper proposes a novel gate structure for modifying the current MUX architecture, along with a mixed coding strategy that achieves the maximum coding capacity within the modified MUX architecture. Additionally, an efficient synthesis tool for the mixed-coding-based MUXes (LaMUXes) is presented. Experimental results demonstrate that the LaMUX is exceptionally efficient, substantially reducing the usage of pneumatic controllers and microvalves compared to existing MUX designs.
Siyuan Liang 0002, Yushen Zhang, Rana Altay, Hudson Gasvoda, Mengchu Li, Ismail Emre Araci, Tsun-Ming Tseng, Ulf Schlichtmann, Tsung-Yi Ho
DAC6
2023 Integrated Test Module Design for Microfluidic Large-Scale Integration
abstract
Microfluidic large-scale integration (mLSI) is a promising lab-on-a-chip platform for high-throughput bio-applications. Due to the high integration scale and the small feature size, control channels on mLSI chips are prone to blockage and leakage defects, which may lead to faulty behavior of valves and erroneous experimental results. Thus, mLSI chips need to be tested before usage. Current mLSI-tests are mostly performed in a straightforward way by testing each valve individually, which is very time consuming and error prone. As the integration scale of mLSI chips keeps increasing, there is a pressing demand for more efficient test approaches. This work proposes the first built-in-self-test (BIST) method for mLSI with an integrated test module design. Instead of testing individual valves, the proposed method directly tests the control channels and thus greatly improves the test efficiency. Only${}({n}/{2})$and$\lceil \log _{2}(n+1)\rceil $test operations are required to test the blockage and leakage defects, respectively, of$n$control channels. The proposed test module consumes moderate area overhead and the test method is easy to operate. Neither specialized software nor external pressure sensors are required for carrying out the tests. Experiments show that our test approach is sensitive enough to detect defects that have a feature size as small as 10$\mu \text{m}$and that are several centimeters away from the test module.
Mengchu Li, Yushen Zhang, Ju Young Lee, Hudson Gasvoda, Ismail Emre Araci, Tsun-Ming Tseng, Ulf Schlichtmann
IEEE Trans. Comput. Aided Des. Integr. Circuits Syst.5
2018 Columba S: a scalable co-layout design automation tool for microfluidic large-scale integration
abstract
Microfluidic large-scale integration (mLSI) is a promising platform for high-throughput biological applications. Design automation for mLSI has made much progress in recent years. Columba and its succeeding work Columba 2.0 proposed a mathematical modeling method that enables automatic design of manufacturing-ready chips within minutes. However, current approaches suffer from a huge computation load when the designs become larger. Thus, in this work, we propose Columba S with a focus on scalability. Columba S applies a new architectural framework and a straight channel routing discipline, and synthesizes multiplexers for efficient and reconfigurable valve control. Experiments show that Columba S is able to generate mLSI designs with more than 200 functional units within three minutes, which enables the design of a platform for large and complex applications.
Tsun-Ming Tseng, Mengchu Li, Daniel Nestor Freitas, Amy Mongersun, Ismail Emre Araci, Tsung-Yi Ho, Ulf Schlichtmann
DAC5
2018 Columba 2.0: A Co-Layout Synthesis Tool for Continuous-Flow Microfluidic Biochips
abstract
Continuous-flow microfluidic large-scale integration (mLSI) shows increasing importance in biological/chemical fields, thanks to its advantages in miniaturization and high throughput. Current mLSI is designed manually, which is time-consuming and error-prone. In recent years, design automation research for mLSI has evolved rapidly, aiming to replace manual labor by computers. However, previous design automation approaches used to design each microfluidic layer separately and over-simplify the layer interactions to various degrees, which resulted in a gap between realistic requirements and automatically generated designs. In this paper, we propose a module model library to accurately model microfluidic components involving layer interactions; and we propose a co-layout synthesis tool, Columba, which generates AutoCAD-compatible designs that fulfill all designs rules and can be directly used for mask fabrication. Columba takes plain-text netlist descriptions as inputs, and performs simultaneous placement and routing for multiple layers while ensuring the planarity of each layer. We validate Columba by fabricating two of its output designs. Columba is the first design automation tool that can seamlessly synchronize with the manufacturing flow.
Tsun-Ming Tseng, Mengchu Li, Daniel Nestor Freitas, Travis McAuley, Bing Li 0005, Tsung-Yi Ho, Ismail Emre Araci, Ulf Schlichtmann
IEEE Trans. Comput. Aided Des. Integr. Circuits Syst.7
2015 Microfluidic very large-scale integration for biochips: Technology, testing and fault-tolerant design
abstract
Microfluidic biochips are replacing the conventional biochemical analyzers by integrating all the necessary functions for biochemical analysis using microfluidics. Biochips are used in many application areas, such as, in vitro diagnostics, drug discovery, biotech and ecology. The focus of this paper is on continuous-flow biochips, where the basic building block is a microvalve. By combining these microvalves, more complex units such as mixers, switches, multiplexers can be built, hence the name of the technology, “microfluidic Very Large-Scale Integration” (mVLSI). A roadblock in the deployment of microfluidic biochips is their low reliability and lack of test techniques to screen defective devices before they are used for biochemical analysis. Defective chips lead to repetition of experiments, which is undesirable due to high reagent cost and limited availability of samples. This paper presents the state-of-the-art in the mVLSI platforms and emerging research challenges in the area of continuous-flow microfluidics, focusing on testing techniques and fault-tolerant design.
Ismail Emre Araci, Paul Pop, Krishnendu Chakrabarty
ETS1