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Carsten Lipka

dblp:166/8401 · DBLP profile ↗
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1ranked-venue papers
0as first author
0since 2021 · last 2015
—ORCID · none

Domains — the database's venue-derived domains; a paper can count in several

Databases, data management, data science and information retrieval · 1

Expertise — from the expertise taxonomy: the topics of the expert's papers under the CCF categories. A weight counts papers with recency: 1 for a paper about the topic, 0.3 when the topic is its context, halved every five years.

Computer architecture, parallel and distributed computing, and storage systems
1 paper
High-performance computing · 50% Parallel and multicore computing · 50%

Topics — the 4 heaviest of 4, each with the papers that count most for it

TopicWeightPapersLastEvidence papers
Parallel and multicore computing › parallel scheduling
adaptive scheduling
0.212015
SAASFEE: Scalable Scientific Workflow Execution Engine · Proc. VLDB Endow. 2015
High-performance computing › scientific workflow
scientific workflow management
0.212015
SAASFEE: Scalable Scientific Workflow Execution Engine · Proc. VLDB Endow. 2015
Parallel and multicore computing
task scheduling
0.212015
SAASFEE: Scalable Scientific Workflow Execution Engine · Proc. VLDB Endow. 2015
High-performance computing › scientific workflow
workflow engine
0.212015
SAASFEE: Scalable Scientific Workflow Execution Engine · Proc. VLDB Endow. 2015
YearPublicationVenuePosition
2015 SAASFEE: Scalable Scientific Workflow Execution Engine
abstract
Across many fields of science, primary data sets like sensor read-outs, time series, and genomic sequences are analyzed by complex chains of specialized tools and scripts exchanging intermediate results in domain-specific file formats. Scientific workflow management systems (SWfMSs) support the development and execution of these tool chains by providing workflow specification languages, graphical editors, fault-tolerant execution engines, etc. However, many SWfMSs are not prepared to handle large data sets because of inadequate support for distributed computing. On the other hand, most SWfMSs that do support distributed computing only allow static task execution orders. We present SAASFEE, a SWfMS which runs arbitrarily complex workflows on Hadoop YARN. Workflows are specified in Cuneiform, a functional workflow language focusing on parallelization and easy integration of existing software. Cuneiform workflows are executed on Hi-WAY, a higher-level scheduler for running workflows on YARN. Distinct features of SAASFEE are the ability to execute iterative workflows, an adaptive task scheduler, re-executable provenance traces, and compatibility to selected other workflow systems. In the demonstration, we present all components of SAASFEE using real-life workflows from the field of genomics.
Marc Bux, Jörgen Brandt, Carsten Lipka, Kamal Hakimzadeh, Jim Dowling, Ulf Leser
Proc. VLDB Endow.3