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Carlos Ignacio Gonzalez-Vila

dblp:167/1808 · DBLP profile ↗
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2ranked-venue papers
0as first author
0since 2021 · last 2016
—ORCID · none

Domains — the database's venue-derived domains; a paper can count in several

Artificial intelligence and machine learning · 1Applied, interdisciplinary, general and emerging computing · 1

Expertise — from the expertise taxonomy: the topics of the expert's papers under the CCF categories. A weight counts papers with recency: 1 for a paper about the topic, 0.3 when the topic is its context, halved every five years.

Interdisciplinary, comprehensive, and emerging computing
1 paper
Bioinformatics and computational biology · 100%
Computer architecture, parallel and distributed computing, and storage systems
1 paper
High-performance computing · 100%

Topics — the 3 heaviest of 3, each with the papers that count most for it

TopicWeightPapersLastEvidence papers
Bioinformatics and computational biology › genomics › microbial genomics
bacterial genome analysis
0.212015
IonGAP: integrative bacterial genome analysis for Ion Torrent sequence data · Bioinform. 2015
Bioinformatics and computational biology
comparative genomics
0.112015
IonGAP: integrative bacterial genome analysis for Ion Torrent sequence data · Bioinform. 2015
High-performance computing
scientific computing systems
0.112015
IonGAP: integrative bacterial genome analysis for Ion Torrent sequence data · Bioinform. 2015

Methods — techniques the papers use, named apart from their topics

sequence assembly · 0.4genome annotation · 0.4bacterial classification · 0.4
YearPublicationVenuePosition
2016 Hybrid parameter control approach applied to a diversity-based multi-objective memetic algorithm for frequency assignment problems
abstract
In order to address the difficult issue of parameter setting within a diversity-based Multi-objective Evolutionary Algorithm (MOEA), we recently proposed a hybrid control scheme based on both Fuzzy Logic Controllers (FLCs) and Hyper-heuristics (HHs). The method simultaneously adapts both symbolic and numeric parameters and was shown to be effective when controlling a diversity-based MOEA applied to a range of benchmark problems. Here, we show that the hybrid control scheme generalises to other meta-heuristics by using it to adapt several parameters of a diversity-based multi-objective Memetic Algorithm (MA) applied to a Frequency Assignment Problem (FAP). Using real-world instances of the FAP, we demonstrate that our proposed parameter control method outperforms parameter tuning of the MA. The results provide new evidence that the method can be successfully applied to significantly more complex problems than the benchmarks previously tested.
Eduardo Segredo, Ben Paechter, Emma Hart, Carlos Ignacio Gonzalez-Vila
CEC4
2015 IonGAP: integrative bacterial genome analysis for Ion Torrent sequence data
abstract
UNLABELLED: We introduce IonGAP, a publicly available Web platform designed for the analysis of whole bacterial genomes using Ion Torrent sequence data. Besides assembly, it integrates a variety of comparative genomics, annotation and bacterial classification routines, based on the widely used FASTQ, BAM and SRA file formats. Benchmarking with different datasets evidenced that IonGAP is a fast, powerful and simple-to-use bioinformatics tool. By releasing this platform, we aim to translate low-cost bacterial genome analysis for microbiological prevention and control in healthcare, agroalimentary and pharmaceutical industry applications. AVAILABILITY AND IMPLEMENTATION: IonGAP is hosted by the ITER's Teide-HPC supercomputer and is freely available on the Web for non-commercial use at http://iongap.hpc.iter.es. CONTACT: [email protected] or [email protected] SUPPLEMENTARY INFORMATION: Supplementary data are available at Bioinformatics online.
Adrian Baez-Ortega, Fabian Lorenzo-Diaz, Mariano Hernandez, Carlos Ignacio Gonzalez-Vila, José Luis Roda García, Marcos Colebrook
Bioinform.4