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Grace E. Lee

dblp:174/6820 · also Grace Eunkyung Lee · DBLP profile ↗
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4ranked-venue papers
3as first author
2since 2021 · last 2023
0000-0001-7458-414XORCID · verified

Domains — the database's venue-derived domains; a paper can count in several

Databases, data management, data science and information retrieval · 4 · 3 first-author · 2 since 2021

Expertise — from the expertise taxonomy: the topics of the expert's papers under the CCF categories. A weight counts papers with recency: 1 for a paper about the topic, 0.3 when the topic is its context, halved every five years.

Databases, data mining, and information retrieval
3 papers
Information retrieval · 48% Data mining · 33% Machine learning and data management · 19%

Topics — the 7 heaviest of 7, each with the papers that count most for it

TopicWeightPapersLastEvidence papers
Data mining › text mining
text classification
0.712023
Context-Aware Classification of Legal Document Pages · SIGIR 2023
Machine learning and data management
data annotation
0.412019
A Study on Agreement in PICO Span Annotations · SIGIR 2019
Information retrieval › ranking › text ranking
document ranking
0.312018
Seed-driven Document Ranking for Systematic Reviews in Evidence-Based Medicine · SIGIR 2018
Information retrieval
evaluation
0.222019
A Study on Agreement in PICO Span Annotations · SIGIR 2019
Seed-driven Document Ranking for Systematic Reviews in Evidence-Based Medicine · SIGIR 2018
Information retrieval › document processing
legal document processing
0.212023
Context-Aware Classification of Legal Document Pages · SIGIR 2023
Information retrieval › evaluation
inter-annotator agreement
0.112019
A Study on Agreement in PICO Span Annotations · SIGIR 2019
Information retrieval › evaluation
benchmark evaluation
0.112018
Seed-driven Document Ranking for Systematic Reviews in Evidence-Based Medicine · SIGIR 2018

Methods — techniques the papers use, named apart from their topics

transformer · 0.7BERT · 0.7span agreement metrics · 0.4word embeddings · 0.3bag of clinical terms · 0.3
YearPublicationVenuePosition
2023 Context-Aware Classification of Legal Document Pages
abstract
For many business applications that require the processing, indexing, and retrieval of professional documents such as legal briefs (in PDF format etc.), it is often essential to classify the pages of any given document into their corresponding types beforehand. Most existing studies in the field of document image classification either focus on single-page documents or treat multiple pages in a document independently. Although in recent years a few techniques have been proposed to exploit the context information from neighboring pages to enhance document page classification, they typically cannot be utilized with large pre-trained language models due to the constraint on input length. In this paper, we present a simple but effective approach that overcomes the above limitation. Specifically, we enhance the input with extra tokens carrying sequential information about previous pages --- introducing recurrence --- which enables the usage of pre-trained Transformer models like BERT for context-aware page classification. Our experiments conducted on two legal datasets in English and Portuguese respectively show that the proposed approach can significantly improve the performance of document page classification compared to the non-recurrent setup as well as the other context-aware baselines.
Pavlos Fragkogiannis, Martina Forster, Grace E. Lee, Dell Zhang
SIGIR3
2021 Understanding the stability of medical concept embeddings
abstract
Abstract Frequency is one of the major factors for training quality word embeddings. Several studies have recently discussed the stability of word embeddings in general domain and suggested factors influencing the stability. In this work, we conduct a detailed analysis on the stability of concept embeddings in medical domain, particularly in relations with concept frequency. The analysis reveals the surprising high stability of low‐frequency concepts: low‐frequency (<100) concepts have the same high stability as high‐frequency (>1,000) concepts. To develop a deeper understanding of this finding, we propose a new factor, the noisiness of context words, which influences the stability of medical concept embeddings regardless of high or low frequency. We evaluate the proposed factor by showing the linear correlation with the stability of medical concept embeddings. The correlations are clear and consistent with various groups of medical concepts. Based on the linear relations, we make suggestions on ways to adjust the noisiness of context words for the improvement of stability. Finally, we demonstrate that the linear relation of the proposed factor extends to the word embedding stability in general domain.
Grace E. Lee, Aixin Sun
J. Assoc. Inf. Sci. Technol.1
2019 A Study on Agreement in PICO Span Annotations
abstract
In evidence-based medicine, relevance of medical literature is determined by predefined relevance conditions. The conditions are defined based on PICO elements, namely, Patient, Intervention, Comparator, and Outcome. Hence, PICO annotations in medical literature are essential for automatic relevant document filtering. However, defining boundaries of text spans for PICO elements is not straightforward. In this paper, we study the agreement of PICO annotations made by multiple human annotators, including both experts and non-experts. Agreements are estimated by a standard span agreement (i.e. matching both labels and boundaries of text spans), and two types of relaxed span agreement (i.e. matching labels without guaranteeing matching boundaries of spans). Based on the analysis, we report two observations: (i) Boundaries of PICO span annotations by individual annotators are very diverse. (ii) Despite the disagreement in span boundaries, general areas of the span annotations arebroadly agreed by annotators. Our results suggest that applying a standard agreement alone may undermine the agreement of PICO spans, and adopting both a standard and a relaxed agreements is more suitable for PICO span evaluation.
Grace E. Lee, Aixin Sun
SIGIR1
2018 Seed-driven Document Ranking for Systematic Reviews in Evidence-Based Medicine
abstract
Systematic review (SR) in evidence-based medicine is a literature review which provides a conclusion to a specific clinical question. To assure credible and reproducible conclusions, SRs are conducted by well-defined steps. One of the key steps, the screening step, is to identify relevant documents from a pool of candidate documents. Typically about 2000 candidate documents will be retrieved from databases using keyword queries for a SR. From which, about 20 relevant documents are manually identified by SR experts, based on detailed relevance conditions or eligibility criteria. Recent studies show that document ranking, or screening prioritization, is a promising way to improve the manual screening process. In this paper, we propose a seed-driven document ranking (SDR) model for effective screening, with the assumption that one relevant document is known, i.e., the seed document. Based on a detailed analysis of characteristics of relevant documents, SDR represents documents using bag of clinical terms, rather than the commonly used bag of words. More importantly, we propose a method to estimate the importance of the clinical terms based on their distribution in candidate documents. On benchmark dataset released by CLEF'17 eHealth Task 2, we show that the proposed SDR outperforms state-of-the-art solutions. Interestingly, we also observe that ranking based on word embedding representation of documents well complements SDR. The best ranking is achieved by combining the relevances estimated by SDR and by word embedding. Additionally, we report results of simulating the manual screening process with SDR.
Grace E. Lee, Aixin Sun
SIGIR1