EDBT 2026 Demo / reviewers in the wild / expert
Randall J. DeJong
dblp:182/4829
· DBLP profile ↗
1ranked-venue papers
0as first author
0since 2021 · last 2016
—ORCID · unresolved
Domains — the database's venue-derived domains; a paper can count in several
Applied, interdisciplinary, general and emerging computing · 1
Expertise — from the expertise taxonomy: the topics of the expert's papers under the CCF categories. A weight counts papers with recency: 1 for a paper about the topic, 0.3 when the topic is its context, halved every five years.
| Interdisciplinary, comprehensive, and emerging computing
1 paper |
Bioinformatics and computational biology · 100% |
Topics — the 3 heaviest of 3, each with the papers that count most for it
| Topic | Weight | Papers | Last | Evidence papers |
|---|---|---|---|---|
Bioinformatics and computational biology
biological database |
0.2 | 1 | 2016 | PhamDB: a web-based application for building Phamerator databases · Bioinform. 2016 |
Bioinformatics and computational biology › genomics › viral genomics
phage genomics |
0.2 | 1 | 2016 | PhamDB: a web-based application for building Phamerator databases · Bioinform. 2016 |
Bioinformatics and computational biology › bioinformatics infrastructure
web-based bioinformatics tools |
0.1 | 1 | 2016 | PhamDB: a web-based application for building Phamerator databases · Bioinform. 2016 |
Methods — techniques the papers use, named apart from their topics
gene similarity clustering · 0.2genbank file validation · 0.2
| Year | Publication | Venue | Position |
|---|---|---|---|
| 2016 | PhamDB: a web-based application for building Phamerator databasesabstractUNLABELLED: PhamDB is a web application which creates databases of bacteriophage genes, grouped by gene similarity. It is backwards compatible with the existing Phamerator desktop software while providing an improved database creation workflow. Key features include a graphical user interface, validation of uploaded GenBank files, and abilities to import phages from existing databases, modify existing databases and queue multiple jobs. AVAILABILITY AND IMPLEMENTATION: Source code and installation instructions for Linux, Windows and Mac OSX are freely available at https://github.com/jglamine/phage PhamDB is also distributed as a docker image which can be managed via Kitematic. This docker image contains the application and all third party software dependencies as a pre-configured system, and is freely available via the installation instructions provided. CONTACT: [email protected]. James G. Lamine, Randall J. DeJong, Serita M. Nelesen |
Bioinform. | 2 |