Randall J. DeJong

dblp:182/4829 · DBLP profile ↗
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1ranked-venue papers
0as first author
0since 2021 · last 2016
—ORCID · unresolved

Domains — the database's venue-derived domains; a paper can count in several

Applied, interdisciplinary, general and emerging computing · 1

Expertise — from the expertise taxonomy: the topics of the expert's papers under the CCF categories. A weight counts papers with recency: 1 for a paper about the topic, 0.3 when the topic is its context, halved every five years.

Interdisciplinary, comprehensive, and emerging computing
1 paper
Bioinformatics and computational biology · 100%

Topics — the 3 heaviest of 3, each with the papers that count most for it

TopicWeightPapersLastEvidence papers
Bioinformatics and computational biology
biological database
0.212016
PhamDB: a web-based application for building Phamerator databases · Bioinform. 2016
Bioinformatics and computational biology › genomics › viral genomics
phage genomics
0.212016
PhamDB: a web-based application for building Phamerator databases · Bioinform. 2016
Bioinformatics and computational biology › bioinformatics infrastructure
web-based bioinformatics tools
0.112016
PhamDB: a web-based application for building Phamerator databases · Bioinform. 2016

Methods — techniques the papers use, named apart from their topics

gene similarity clustering · 0.2genbank file validation · 0.2
YearPublicationVenuePosition
2016 PhamDB: a web-based application for building Phamerator databases
abstract
UNLABELLED: PhamDB is a web application which creates databases of bacteriophage genes, grouped by gene similarity. It is backwards compatible with the existing Phamerator desktop software while providing an improved database creation workflow. Key features include a graphical user interface, validation of uploaded GenBank files, and abilities to import phages from existing databases, modify existing databases and queue multiple jobs. AVAILABILITY AND IMPLEMENTATION: Source code and installation instructions for Linux, Windows and Mac OSX are freely available at https://github.com/jglamine/phage PhamDB is also distributed as a docker image which can be managed via Kitematic. This docker image contains the application and all third party software dependencies as a pre-configured system, and is freely available via the installation instructions provided. CONTACT: [email protected].
James G. Lamine, Randall J. DeJong, Serita M. Nelesen
Bioinform.2