The current best practice to measure the performance of base Large Language Models is to establish a multi-task benchmark that covers a range of capabilities of interest. Currently, however, such benchmarks are only available in a few high-resource languages. To address this situation, we present IberoBench, a multilingual, multi-task benchmark for Iberian languages (i.e., Basque, Catalan, Galician, European Spanish and European Portuguese) built on the LM Evaluation Harness framework. The benchmark consists of 62 tasks divided into 179 subtasks. We evaluate 33 existing LLMs on IberoBench on 0- and 5-shot settings. We also explore the issues we encounter when working with the Harness and our approach to solving them to ensure high-quality evaluation.

Luca Moroni, Javier Aula-Blasco, Simone Conia, Irene Baucells, Naiara Perez, Silvia Paniagua Suárez, Anna Sallés, Malte Ostendorff, Júlia Falcão, Guijin Son, Aitor Gonzalez-Agirre, Roberto Navigli, Marta Villegas. Proceedings of the 2025 Conference on Empirical Methods in Natural Language Processing. 2025.

Oscar Sainz, Naiara Perez, Julen Etxaniz, Joseba Fernandez de Landa, Itziar Aldabe, Iker García-Ferrero, Aimar Zabala, Ekhi Azurmendi, German Rigau, Eneko Agirre, Mikel Artetxe, Aitor Soroa. Proceedings of the 2025 Conference on Empirical Methods in Natural Language Processing. 2025.

Natural Language Processing (NLP) based on new deep learning technology is contributing to the emergence of powerful solutions that help healthcare providers and researchers discover valuable patterns within insurmountable volumes of health records and scientific literature. Fundamental to the success of such solutions is the processing of negation and speculation. The article addresses this problem with state-of-the-art deep learning approaches from two perspectives: cue and scope labelling, and assertion classification. In light of the real struggle to access clinical annotated data, the study (a) proposes a methodology to automatically convert cue-scope annotations to assertion annotations; and (b) includes a range of scenarios with varying amounts of training data and adversarial test examples. The results expose the clear advantage of Transformer-based models in this regard, managing to overpass a series of baselines and the related work in the public corpus NUBes of clinical Spanish text.

This paper introduces the first version of the NUBes corpus (Negation and Uncertainty annotations in Biomedical texts in Spanish). The corpus is part of an on-going research and currently consists of 29,682 sentences obtained from anonymised health records annotated with negation and uncertainty. The article includes an exhaustive comparison with similar corpora in Spanish, and presents the main annotation and design decisions. Additionally, we perform preliminary experiments using deep learning algorithms to validate the annotated dataset. As far as we know, NUBes is the largest available corpora for negation in Spanish and the first that also incorporates the annotation of speculation cues, scopes, and events.

HitzalMed is a web-framed tool that performs automatic detection of sensitive information in clinical texts using machine learning algorithms reported to be competitive for the task. Moreover, once sensitive information is detected, different anonymisation techniques are implemented that are configurable by the user –for instance, substitution, where sensitive items are replaced by same category text in an effort to generate a new document that looks as natural as the original one. The tool is able to get data from different document formats and outputs downloadable anonymised data. This paper presents the anonymisation and substitution technology and the demonstrator which is publicly available at https://snlt.vicomtech.org/hitzalmed.

Massive digital data processing provides a wide range of opportunities and benefits, but at the cost of endangering personal data privacy. Anonymisation consists in removing or replacing sensitive information from data, enabling its exploitation for different purposes while preserving the privacy of individuals. Over the years, a lot of automatic anonymisation systems have been proposed; however, depending on the type of data, the target language or the availability of training documents, the task remains challenging still. The emergence of novel deep-learning models during the last two years has brought large improvements to the state of the art in the field of Natural Language Processing. These advancements have been most noticeably led by BERT, a model proposed by Google in 2018, and the shared language models pre-trained on millions of documents. In this paper, we use a BERT-based sequence labelling model to conduct a series of anonymisation experiments on several clinical datasets in Spanish. We also compare BERT with other algorithms. The experiments show that a simple BERT-based model with general-domain pre-training obtains highly competitive results without any domain specific feature engineering.

MOTIVATION: Biomedical literature is one of the most relevant sources of information for knowledge mining in the field of Bioinformatics. In spite of English being the most widely addressed language in the field; in recent years, there has been a growing interest from the natural language processing community in dealing with languages other than English. However, the availability of language resources and tools for appropriate treatment of non-English texts is lacking behind. Our research is concerned with the semantic annotation of biomedical texts in the Spanish language, which can be considered an under-resourced language where biomedical text processing is concerned. RESULTS: We have carried out experiments to assess the effectiveness of several methods for the automatic annotation of biomedical texts in Spanish. One approach is based on the linguistic analysis of Spanish texts and their annotation using an information retrieval and concept disambiguation approach. A second method takes advantage of a Spanish-English machine translation process to annotate English documents and transfer annotations back to Spanish. A third method takes advantage of the combination of both procedures. Our evaluation shows that a combined system has competitive advantages over the two individual procedures. AVAILABILITY AND IMPLEMENTATION: UMLSMapper (https://snlt.vicomtech.org/umlsmapper) and the annotation transfer tool (http://scientmin.taln.upf.edu/anntransfer/) are freely available for research purposes as web services and/or demos. SUPPLEMENTARY INFORMATION: Supplementary data are available at Bioinformatics online.