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Gleb Valin

dblp:188/8458 · DBLP profile ↗
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1ranked-venue papers
0as first author
0since 2021 · last 2016
—ORCID · none

Domains — the database's venue-derived domains; a paper can count in several

Applied, interdisciplinary, general and emerging computing · 1

Expertise — from the expertise taxonomy: the topics of the expert's papers under the CCF categories. A weight counts papers with recency: 1 for a paper about the topic, 0.3 when the topic is its context, halved every five years.

Interdisciplinary, comprehensive, and emerging computing
1 paper
Bioinformatics and computational biology · 100%

Topics — the 5 heaviest of 5, each with the papers that count most for it

TopicWeightPapersLastEvidence papers
Bioinformatics and computational biology › sequence analysis › sequence assembly › genome assembly
assembly quality assessment
0.212016
Icarus: visualizer for de novo assembly evaluation · Bioinform. 2016
Bioinformatics and computational biology › sequence analysis › sequence assembly
assembly visualization
0.212016
Icarus: visualizer for de novo assembly evaluation · Bioinform. 2016
Bioinformatics and computational biology › sequence analysis › sequence assembly
genome assembly
0.212016
Icarus: visualizer for de novo assembly evaluation · Bioinform. 2016
Bioinformatics and computational biology
genomics
0.112016
Icarus: visualizer for de novo assembly evaluation · Bioinform. 2016
Bioinformatics and computational biology › genomics
next-generation sequencing data analysis
0.112016
Icarus: visualizer for de novo assembly evaluation · Bioinform. 2016

Methods — techniques the papers use, named apart from their topics

reference-based assembly assessment · 0.2
YearPublicationVenuePosition
2016 Icarus: visualizer for de novo assembly evaluation
abstract
: Data visualization plays an increasingly important role in NGS data analysis. With advances in both sequencing and computational technologies, it has become a new bottleneck in genomics studies. Indeed, evaluation of de novo genome assemblies is one of the areas that can benefit from the visualization. However, even though multiple quality assessment methods are now available, existing visualization tools are hardly suitable for this purpose. Here, we present Icarus-a novel genome visualizer for accurate assessment and analysis of genomic draft assemblies, which is based on the tool QUAST. Icarus can be used in studies where a related reference genome is available, as well as for non-model organisms. The tool is available online and as a standalone application. AVAILABILITY AND IMPLEMENTATION: http://cab.spbu.ru/software/icarus CONTACT: [email protected] information: Supplementary data are available at Bioinformatics online.
Alla Mikheenko, Gleb Valin, Andrey D. Prjibelski, Vladislav Saveliev, Alexey A. Gurevich
Bioinform.2