Demo Data from EDBT 2026 / reviewers in the wild / expert
Athina Theodosiou
dblp:19/10933
· DBLP profile ↗
1ranked-venue papers
1as first author
0since 2021 · last 2012
0000-0003-4363-8162ORCID · reported
Domains — the database's venue-derived domains; a paper can count in several
Applied, interdisciplinary, general and emerging computing · 1 · 1 first-author
Expertise — from the expertise taxonomy: the topics of the expert's papers under the CCF categories. A weight counts papers with recency: 1 for a paper about the topic, 0.3 when the topic is its context, halved every five years.
| Interdisciplinary, comprehensive, and emerging computing
1 paper |
Bioinformatics and computational biology · 100% |
Topics — the 2 heaviest of 2, each with the papers that count most for it
| Topic | Weight | Papers | Last | Evidence papers |
|---|---|---|---|---|
Bioinformatics and computational biology
sequence analysis |
0.1 | 1 | 2012 | LaTcOm: a web server for visualizing rare codon clusters in coding sequences · Bioinform. 2012 |
Bioinformatics and computational biology › molecular evolution
codon usage analysis |
0.0 | 1 | 2012 | LaTcOm: a web server for visualizing rare codon clusters in coding sequences · Bioinform. 2012 |
Methods — techniques the papers use, named apart from their topics
sliding window · 0.1linear-time algorithm · 0.1%minmax algorithm · 0.1
| Year | Publication | Venue | Position |
|---|---|---|---|
| 2012 | LaTcOm: a web server for visualizing rare codon clusters in coding sequencesabstractUNLABELLED: We present LaTcOm, a new web tool, which offers several alternative methods for 'rare codon cluster' (RCC) identification from a single and simple graphical user interface. In the current version, three RCC detection schemes are implemented: the recently described %MinMax algorithm and a simplified sliding window approach, along with a novel modification of a linear-time algorithm for the detection of maximally scoring subsequences tailored to the RCC detection problem. Among a number of user tunable parameters, several codon-based scales relevant for RCC detection are available, including tRNA abundance values from Escherichia coli and several codon usage tables from a selection of genomes. Furthermore, useful scale transformations may be performed upon user request (e.g. linear, sigmoid). Users may choose to visualize RCC positions within the submitted sequences either with graphical representations or in textual form for further processing. AVAILABILITY: LaTcOm is freely available online at the URL http://troodos.biol.ucy.ac.cy/latcom.html. Athina Theodosiou, Vasilis J. Promponas |
Bioinform. | 1 |