Early detection of patients with elevated risk of developing diabetes mellitus is critical to the improved prevention and overall clinical management of these patients. We aim to apply association rule mining to electronic medical records (EMR) to discover sets of risk factors and their corresponding subpopulations that represent patients at particularly high risk of developing diabetes. Given the high dimensionality of EMRs, association rule mining generates a very large set of rules which we need to summarize for easy clinical use. We reviewed four association rule set summarization techniques and conducted a comparative evaluation to provide guidance regarding their applicability, strengths and weaknesses. We proposed extensions to incorporate risk of diabetes into the process of finding an optimal summary. We evaluated these modified techniques on a real-world prediabetic patient cohort. We found that all four methods produced summaries that described subpopulations at high risk of diabetes with each method having its clear strength. For our purpose, our extension to the Buttom-Up Summarization (BUS) algorithm produced the most suitable summary. The subpopulations identified by this summary covered most high-risk patients, had low overlap and were at very high risk of diabetes.

Associative classification is a predictive modeling technique that constructs a classifier based on class association rules (also known as predictive association rules; PARs). PARs are association rules where the consequence of the rule is a class label. Associative classification has gained substantial research attention because it successfully joins the benefits of association rule mining with classification. These benefits include the inherent ability of association rule mining to extract high-order interactions among the predictors--an ability that many modern classifiers lack--and also the natural interpretability of the individual PARs.

Alzheimer's disease (AD) is associated with progressive cognitive decline leading to dementia. The atrophy/loss of brain structure as seen on Magnetic Resonance Imaging (MRI) is strongly correlated with the severity of the cognitive impairment in AD. In this paper, we set out to find associations between predefined regions of the brain (regions of interest; ROIs) and the severity of the disease. Specifically, we use these associations to address two important issues in AD: (i) typical versus atypical atrophy patterns and (ii) the origin and direction of progression of atrophy, which is currently under debate.

A fuzzy c-means algorithm was adapted for analyzing microarray data. The adaptation consisted of initialization of fuzzy centroids using gene ontology information and the use of Pearson correlation distance in the objective function. To initialize fuzzy centroids, we classified genes based on gene ontology terms and used the classified genes as initial fuzzy clusters. Pearson correlation distance becomes 0 if two genes are either positively or negatively correlated. The algorithm was applied to Yeast and lung cancer microarray datasets. It outperformed the conventional fuzzy c-means algorithm by associating more genes to functional groups.