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Supreeth P. Shashikumar

dblp:198/8594 · also Supreeth Prajwal Shashikumar · DBLP profile ↗
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6ranked-venue papers
2as first author
4since 2021 · last 2024
0000-0002-0348-4261ORCID · verified

Domains — the database's venue-derived domains; a paper can count in several

Applied, interdisciplinary, general and emerging computing · 4 · 3 since 2021Artificial intelligence and machine learning · 2 · 2 first-author · 1 since 2021Databases, data management, data science and information retrieval · 1 · 1 first-author

Expertise — from the expertise taxonomy: the topics of the expert's papers under the CCF categories. A weight counts papers with recency: 1 for a paper about the topic, 0.3 when the topic is its context, halved every five years.

Interdisciplinary, comprehensive, and emerging computing
1 paper
Medical and health informatics · 100%
Human-computer interaction and pervasive computing
1 paper
Wearable and physiological sensing · 100%

Topics — the 2 heaviest of 3, each with the papers that count most for it

TopicWeightPapersLastEvidence papers
Medical and health informatics › electrocardiogram analysis › cardiac arrhythmia detection
atrial fibrillation detection
0.312018
Detection of Paroxysmal Atrial Fibrillation using Attention-based Bidirectional Recurrent Neural Networks · KDD 2018
Medical and health informatics › biomedical signal processing › physiological signal analysis
cardiac monitoring
0.312018
Detection of Paroxysmal Atrial Fibrillation using Attention-based Bidirectional Recurrent Neural Networks · KDD 2018

Methods — techniques the papers use, named apart from their topics

transfer learning · 0.7convolutional neural network · 0.7bidirectional recurrent neural network · 0.7attention mechanism · 0.7
YearPublicationVenuePosition
2024 Impact of wearable device data and multi-scale entropy analysis on improving hospital readmission prediction
abstract
OBJECTIVE: Unplanned readmissions following a hospitalization remain common despite significant efforts to curtail these. Wearable devices may offer help identify patients at high risk for an unplanned readmission. MATERIALS AND METHODS: We conducted a multi-center retrospective cohort study using data from the All of Us data repository. We included subjects with wearable data and developed a baseline Feedforward Neural Network (FNN) model and a Long Short-Term Memory (LSTM) time-series deep learning model to predict daily, unplanned rehospitalizations up to 90 days from discharge. In addition to demographic and laboratory data from subjects, post-discharge data input features include wearable data and multiscale entropy features based on intraday wearable time series. The most significant features in the LSTM model were determined by permutation feature importance testing. RESULTS: In sum, 612 patients met inclusion criteria. The complete LSTM model had a higher area under the receiver operating characteristic curve than the FNN model (0.83 vs 0.795). The 5 most important input features included variables from multiscale entropy (steps) and number of active steps per day. DISCUSSION: Data available from wearable devices can improve ability to predict readmissions. Prior work has focused on predictors available up to discharge or on additional data abstracted from wearable devices. Our results from 35 institutions highlight how multiscale entropy can improve readmission prediction and may impact future work in this domain. CONCLUSION: Wearable data and multiscale entropy can improve prediction of a deep-learning model to predict unplanned 90-day readmissions. Prospective studies are needed to validate these findings.
Vishal Nagarajan, Supreeth P. Shashikumar, Atul Malhotra, Shamim Nemati, Gabriel Wardi
J. Am. Medical Informatics Assoc.2
2022 A Comparison of Uncertainty Estimation Methods for Deep Learning-based Clinical Risk Scores
Archil K. Srivastava, Supreeth P. Shashikumar, Shamim Nemati
AMIA2
2022 Inclusion of social determinants of health improves sepsis readmission prediction models
abstract
OBJECTIVE: Sepsis has a high rate of 30-day unplanned readmissions. Predictive modeling has been suggested as a tool to identify high-risk patients. However, existing sepsis readmission models have low predictive value and most predictive factors in such models are not actionable. MATERIALS AND METHODS: Data from patients enrolled in the AllofUs Research Program cohort from 35 hospitals were used to develop a multicenter validated sepsis-related unplanned readmission model that incorporates clinical and social determinants of health (SDH) to predict 30-day unplanned readmissions. Sepsis cases were identified using concepts represented in the Observational Medical Outcomes Partnership. The dataset included over 60 clinical/laboratory features and over 100 SDH features. RESULTS: Incorporation of SDH factors into our model of clinical and demographic features improves model area under the receiver operating characteristic curve (AUC) significantly (from 0.75 to 0.80; P < .001). Model-agnostic interpretability techniques revealed demographics, economic stability, and delay in getting medical care as important SDH predictive features of unplanned hospital readmissions. DISCUSSION: This work represents one of the largest studies of sepsis readmissions using objective clinical data to date (8935 septic index encounters). SDH are important to determine which sepsis patients are more likely to have an unplanned 30-day readmission. The AllofUS dataset provides granular data from a diverse set of individuals, making this model potentially more generalizable than prior models. CONCLUSION: Use of SDH improves predictive performance of a model to identify which sepsis patients are at high risk of an unplanned 30-day readmission.
Fatemeh Amrollahi, Supreeth P. Shashikumar, Angela Meier, Lucila Ohno-Machado, Shamim Nemati, Gabriel Wardi
J. Am. Medical Informatics Assoc.2
2021 DeepAISE - An interpretable and recurrent neural survival model for early prediction of sepsis
Supreeth P. Shashikumar, Christopher Josef, Ashish Sharma 0001, Shamim Nemati
Artif. Intell. Medicine1
2020 Contextual Embeddings from Clinical Notes Improves Prediction of Sepsis
Fatemeh Amrollahi, Supreeth P. Shashikumar, Fereshteh Razmi, Shamim Nemati
AMIA2
2018 Detection of Paroxysmal Atrial Fibrillation using Attention-based Bidirectional Recurrent Neural Networks
abstract
Detection of atrial fibrillation (AF), a type of cardiac arrhythmia, is difficult since many cases of AF are usually clinically silent and undiagnosed. In particular paroxysmal AF is a form of AF that occurs occasionally, and has a higher probability of being undetected. In this work, we present an attention based deep learning framework for detection of paroxysmal AF episodes from a sequence of windows. Time-frequency representation of 30 seconds recording windows, over a 10 minute data segment, are fed sequentially into a deep convolutional neural network for image-based feature extraction, which are then presented to a bidirectional recurrent neural network with an attention layer for AF detection. To demonstrate the effectiveness of the proposed framework for transient AF detection, we use a database of 24 hour Holter Electrocardiogram (ECG) recordings acquired from 2850 patients at the University of Virginia heart station. The algorithm achieves an AUC of 0.94 on the testing set, which exceeds the performance of baseline models. We also demonstrate the cross-domain generalizablity of the approach by adapting the learned model parameters from one recording modality (ECG) to another (photoplethysmogram) with improved AF detection performance. The proposed high accuracy, low false alarm algorithm for detecting paroxysmal AF has potential applications in long-term monitoring using wearable sensors.
Supreeth P. Shashikumar, Amit J. Shah, Gari D. Clifford, Shamim Nemati
KDD1