EDBT 2026 Demo / reviewers in the wild / expert
Daniel Gottlieb 0001
dblp:20/11287-1 · also Dan Gottlieb 0001
· DBLP profile ↗
12ranked-venue papers
1as first author
7since 2021 · last 2024
0000-0003-4658-2854ORCID · verified
Domains — the database's venue-derived domains; a paper can count in several
Applied, interdisciplinary, general and emerging computing · 12 · 1 first-author · 7 since 2021
| Year | Publication | Venue | Position |
|---|---|---|---|
| 2024 | Real world performance of the 21st Century Cures Act population-level application programming interfaceabstractOBJECTIVE: To evaluate the real-world performance of the SMART/HL7 Bulk Fast Health Interoperability Resources (FHIR) Access Application Programming Interface (API), developed to enable push button access to electronic health record data on large populations, and required under the 21st Century Cures Act Rule. MATERIALS AND METHODS: We used an open-source Bulk FHIR Testing Suite at 5 healthcare sites from April to September 2023, including 4 hospitals using electronic health records (EHRs) certified for interoperability, and 1 Health Information Exchange (HIE) using a custom, standards-compliant API build. We measured export speeds, data sizes, and completeness across 6 types of FHIR. RESULTS: Among the certified platforms, Oracle Cerner led in speed, managing 5-16 million resources at over 8000 resources/min. Three Epic sites exported a FHIR data subset, achieving 1-12 million resources at 1555-2500 resources/min. Notably, the HIE's custom API outperformed, generating over 141 million resources at 12 000 resources/min. DISCUSSION: The HIE's custom API showcased superior performance, endorsing the effectiveness of SMART/HL7 Bulk FHIR in enabling large-scale data exchange while underlining the need for optimization in existing EHR platforms. Agility and scalability are essential for diverse health, research, and public health use cases. CONCLUSION: To fully realize the interoperability goals of the 21st Century Cures Act, addressing the performance limitations of Bulk FHIR API is critical. It would be beneficial to include performance metrics in both certification and reporting processes. James R. Jones, Daniel Gottlieb 0001, Andrew J. McMurry, Ashish Atreja, Pankaja M. Desai, Brian E. Dixon, Philip R. O. Payne, Anil J. Saldanha, Prabhu R. V. Shankar, Yauheni Solad, Adam B. Wilcox, Momeena S. Ali, Eugene Kang, Andrew M. Martin, Elizabeth Sprouse, David E. Taylor, Michael Terry, Vlad Ignatov, Kenneth D. Mandl |
J. Am. Medical Informatics Assoc. | 2 |
| 2024 | Cumulus: a federated electronic health record-based learning system powered by Fast Healthcare Interoperability Resources and artificial intelligenceabstractOBJECTIVE: To address challenges in large-scale electronic health record (EHR) data exchange, we sought to develop, deploy, and test an open source, cloud-hosted app "listener" that accesses standardized data across the SMART/HL7 Bulk FHIR Access application programming interface (API). METHODS: We advance a model for scalable, federated, data sharing and learning. Cumulus software is designed to address key technology and policy desiderata including local utility, control, and administrative simplicity as well as privacy preservation during robust data sharing, and artificial intelligence (AI) for processing unstructured text. RESULTS: Cumulus relies on containerized, cloud-hosted software, installed within a healthcare organization's security envelope. Cumulus accesses EHR data via the Bulk FHIR interface and streamlines automated processing and sharing. The modular design enables use of the latest AI and natural language processing tools and supports provider autonomy and administrative simplicity. In an initial test, Cumulus was deployed across 5 healthcare systems each partnered with public health. Cumulus output is patient counts which were aggregated into a table stratifying variables of interest to enable population health studies. All code is available open source. A policy stipulating that only aggregate data leave the institution greatly facilitated data sharing agreements. DISCUSSION AND CONCLUSION: Cumulus addresses barriers to data sharing based on (1) federally required support for standard APIs, (2) increasing use of cloud computing, and (3) advances in AI. There is potential for scalability to support learning across myriad network configurations and use cases. Andrew J. McMurry, Daniel Gottlieb 0001, Timothy A. Miller, James R. Jones, Ashish Atreja, Jennifer Crago, Pankaja M. Desai, Brian E. Dixon, Matthew Garber, Vlad Ignatov, Lyndsey A Kirchner, Philip R. O. Payne, Anil J. Saldanha, Prabhu R. V. Shankar, Yauheni Solad, Elizabeth Sprouse, Michael Terry, Adam B. Wilcox, Kenneth D. Mandl |
J. Am. Medical Informatics Assoc. | 2 |
| 2024 | Beyond compliance with the 21st Century Cures Act Rule: a patient controlled electronic health information export application programming interfaceabstractOBJECTIVE: The 21st Century Cures Act Final Rule requires that certified electronic health records (EHRs) be able to export a patient's full set of electronic health information (EHI). This requirement becomes more powerful if EHI exports use interoperable application programming interfaces (APIs). We sought to advance the ecosystem, instantiating policy desiderata in a working reference implementation based on a consensus design. MATERIALS AND METHODS: We formulate a model for interoperable, patient-controlled, app-driven access to EHI exports in an open source reference implementation following the Argonaut FHIR Accelerator consensus implementation guide for EHI Export. RESULTS: The reference implementation, which asynchronously provides EHI across an API, has three central components: a web application for patients to request EHI exports, an EHI server to respond to requests, and an administrative export management web application to manage requests. It leverages mandated SMART on FHIR/Bulk FHIR APIs. DISCUSSION: A patient-controlled app enabling full EHI export from any EHR across an API could facilitate national-scale patient-directed information exchange. We hope releasing these tools sparks engagement from the health IT community to evolve the design, implement and test in real-world settings, and develop patient-facing apps. CONCLUSION: To advance regulatory innovation, we formulate a model that builds on existing requirements under the Cures Act Rule and takes a step toward an interoperable, scalable approach, simplifying patient access to their own health data; supporting the sharing of clinical data for both improved patient care and medical research; and encouraging the growth of an ecosystem of third-party applications. Dylan Phelan, Daniel Gottlieb 0001, Joshua C. Mandel, Vlad Ignatov, Brett Marquard, Alyssa Ellis, Kenneth D. Mandl |
J. Am. Medical Informatics Assoc. | 2 |
| 2021 | The SMART Cumulus Text-to-FHIR NLP Pipeline
Timothy A. Miller, Bin Mao, Daniel Gottlieb 0001, Kenneth D. Mandl |
AMIA | 3 |
| 2021 | Patient-led data sharing for clinical bioinformatics research: USCDI and beyondabstractThe 21st Century Cures Act, passed in 2016, and the Final Rules it called for create a roadmap for enabling patient access to their electronic health information. The set of data to be made available, as determined by the Office of the National Coordinator for Health IT through the US Core Data for Interoperability expansion process, will impact the value creation of this improved data liquidity. In this commentary, we look at the potential for significant value creation from USCDI in the context of clinical bioinformatics research and advocate for the research community's involvement in the USCDI process to propel this value creation forward. We also describe 1 mechanism-using existing required APIs for full data export capabilities-that could pragmatically enable this value creation at minimal additional technical lift beyond the current regulatory requirements. William J. Gordon, Daniel Gottlieb 0001, David A. Kreda, Joshua C. Mandel, Kenneth D. Mandl, Isaac S. Kohane |
J. Am. Medical Informatics Assoc. | 2 |
| 2021 | A landscape survey of planned SMART/HL7 bulk FHIR data access API implementations and toolsabstractThe Office of National Coordinator for Health Information Technology final rule implementing the interoperability and information blocking provisions of the 21st Century Cures Act requires support for two SMART (Substitutable Medical Applications, Reusable Technologies) application programming interfaces (APIs) and instantiates Health Level Seven International (HL7) Fast Healthcare Interoperability Resources (FHIR) as a lingua franca for health data. We sought to assess the current state and near-term plans for the SMART/HL7 Bulk FHIR Access API implementation across organizations including electronic health record vendors, cloud vendors, public health contractors, research institutions, payors, FHIR tooling developers, and other purveyors of health information technology platforms. We learned that many organizations not required through regulation to use standardized bulk data are rapidly implementing the API for a wide array of use cases. This may portend an unprecedented level of standardized population-level health data exchange that will support an apps and analytics ecosystem. Feedback from early adopters on the API's limitations and unsolved problems in the space of population health are highlighted. James R. Jones, Daniel Gottlieb 0001, Joshua C. Mandel, Vlad Ignatov, Alyssa Ellis, Wayne Kubick, Kenneth D. Mandl |
J. Am. Medical Informatics Assoc. | 2 |
| 2021 | A proposal for shoring up Federal Trade Commission protections for electronic health record-connected consumer apps under 21st Century CuresabstractUnder the 21st Century Cures Act and the Office of the National Coordinator for Health Information Technology (ONC) rule implementing its interoperability provisions, a patient's rights to easily request and obtain digital access to portions of their medical records are now supported by both technology and policy. Data, once directed by a patient to leave a Health Insurance Portability and Accountability Act-covered health entity and enter a consumer app, will usually fall under Federal Trade Commission oversight. Because the statutory authority of the ONC does not extend to health data protection, there is not yet regulation to specifically address privacy protections for consumer apps. A technologically feasible workflow that could be widely adopted and permissible under ONC's rule, involves using the SMART on FHIR OAuth authorization routine to present standardized information about app behavior. This approach would not bias the patient in a way that triggers penalties under information blocking provisions of the rule. Raheel Sayeed, James R. Jones, Daniel Gottlieb 0001, Joshua C. Mandel, Kenneth D. Mandl |
J. Am. Medical Informatics Assoc. | 3 |
| 2020 | SMART Markers: A SMART on FHIR Framework to Standardize Collection of Patient Generated Health Data
Raheel Sayeed, Daniel Gottlieb 0001, Kenneth D. Mandl |
AMIA | 2 |
| 2019 | High Performance Computing on Flat FHIR Files Created with the New SMART/HL7 Bulk Data Access Standard
Dianbo Liu, Ricky Sahu, Vlad Ignatov, Daniel Gottlieb 0001, Kenneth D. Mandl |
AMIA | 4 |
| 2018 | Push Button Population Health Data: Extending the HL7 FHIR Standard to Support Bulk Data Export
Daniel Gottlieb 0001, Joshua C. Mandel, Grahame Grieve, Wayne Kubick, Charles Jaffe, Kenneth D. Mandl |
AMIA | 1 |
| 2018 | System Demonstration: Integration of Patient Reported Outcomes with Electronic Health Records - the EASI-PRO Project
Justin Starren, Daniella Meeker, Kenneth D. Mandl, Guo-Qiang Zhang 0001, Alyssa White, Raheel Sayeed, Daniel Gottlieb 0001, Alex Wormuth, Welmoed Van Deen, Shiqiang Tao |
AMIA | 7 |
| 2016 | SMART on FHIR Platform for Interoperable Healthcare Applications
Joshua C. Mandel, Daniel Gottlieb 0001, Daniel S. Fritsch, Kenneth D. Mandl |
AMIA | 2 |