EDBT 2026 Demo / reviewers in the wild / expert
Wenjie Wei
dblp:20/3112
· DBLP profile ↗
28ranked-venue papers
8as first author
25since 2021 · last 2026
—ORCID · conflict
Domains — the database's venue-derived domains; a paper can count in several
Artificial intelligence and machine learning · 21 · 5 first-author · 20 since 2021Graphics, computer vision, multimedia, augmented reality and games · 10 · 2 first-author · 10 since 2021Systems, architecture and hardware · 1Security and privacy · 1 · 1 first-author · 1 since 2021Applied, interdisciplinary, general and emerging computing · 1 · 1 first-author · 1 since 2021
| Year | Publication | Venue | Position |
|---|---|---|---|
| 2026 | Towards Training-Free and Accurate ANN-to-SNN Conversion via Activation-Aware RedistributionabstractConversion represents an effective approach for obtaining low-power models by transforming Artificial Neural Networks (ANNs) into event-driven Spiking Neural Networks (SNNs) without additional training. However, existing training-free conversion methods often incur substantial conversion errors. Here, we first reveal that these conversion errors primarily arise from a distributional mismatch, as the activation distributions of ANNs exhibit channel-wise shifts and scaling, whereas spike rates lack corresponding channel-specific characteristics. To address this limitation, we propose Adaptive Integrate-and-Fire (AIF) neurons with channel-specific thresholds and membrane-potential offsets that dynamically adjust spike rates. These parameters are optimized to jointly minimize conversion errors and maximize information entropy, enabling AIF neurons to capture the activation distribution characteristics of the original ANN. Moreover, AIF neurons can be seamlessly integrated into Transformer architectures with only negligible additional computational cost. Our method achieves state-of-the-art results on multiple vision and natural language processing benchmarks, in particular attaining a notable top-1 accuracy of 85.52% on ImageNet-1K. Honglin Cao, Shuai Wang 0058, Zijian Zhou 0005, Ammar Belatreche, Wenjie Wei, Malu Zhang, Haizhou Li 0001 |
AAAI | 5 |
| 2026 | Training-Free ANN-to-SNN Conversion for High-Performance Spiking TransformersabstractLeveraging the event-driven paradigm, Spiking Neural Networks (SNNs) offer a promising approach for constructing energy-efficient Transformer architectures. Compared to directly trained Spiking Transformers, ANN-to-SNN conversion methods bypass the high training costs. However, existing methods still suffer from notable limitations, failing to effectively handle nonlinear operations in Transformer architectures and requiring additional fine-tuning processes for pre-trained ANNs. To address these issues, we propose a high-performance and training-free ANN-to-SNN conversion framework tailored for Transformer architectures. Specifically, we introduce a Multi-basis Exponential Decay (MBE) neuron, which employs an exponential decay strategy and multi-basis encoding method to efficiently approximate various nonlinear operations. It removes the requirement for weight modifications in pre-trained ANNs. Extensive experiments across diverse tasks (CV, NLU, NLG) and mainstream Transformer architectures (ViT, RoBERTa, GPT-2) demonstrate that our method achieves near-lossless conversion accuracy with significantly lower latency. This provides a promising pathway for the efficient and scalable deployment of Spiking Transformers in real-world applications. Wenjie Wei, Dehao Zhang, Shuai Wang 0058, Qian Sun 0014, Jieyuan Zhang, Malu Zhang |
AAAI | 3 |
| 2026 | Spacnet: a spectral-aware dual-path CNN-transformer for encrypted traffic classification in ICVsabstractAbstract High-precision classification of encrypted traffic plays an important role in ensuring the reliability and safety of intelligent connected vehicles. However, the communication environment of vehicles is affected by complex traffic scenarios and changing external environments, which introduces noise into the observed traffic (e.g., padding artifacts and retransmission bursts). In addition, there is a strong similarity between different service categories. Therefore, existing encrypted traffic classification techniques are not applicable. To overcome these challenges, we propose SpACNet, a collaborative CNN-Transformer dual-path spectrum sensing classification network. Specifically, in addition to using stream sequence information, SpACNet also uses layered multi-scale spectrum recalibration technology and gated axial self-attention mechanism for frequency-domain information to suppress the influence of aliasing artifacts and noise. In terms of feature fusion, orthogonal constrained dynamic tensors and gating mechanisms are used to integrate and balance time-domain, frequency-domain tensors, and interaction tensors. We evaluate SpACNet and three advanced baseline methods based on public and real-world datasets. The results show that SpACNet outperforms existing methods and demonstrates robust performance on datasets containing highly similar traffic categories. In addition, a series of ablation experiments is conducted to demonstrate the advanced nature of the proposed method. Wenjie Wei, Xianwei Zhou, Fuhong Lin |
Cybersecur. | 1 |
| 2026 | Spiking neural networks for EEG signal analysis: From theory to practice
Siqi Cai 0002, Zheyuan Lin, Wenjie Wei, Shuai Wang 0058, Malu Zhang, Tanja Schultz, Haizhou Li 0001 |
Neural Networks | 4 |
| 2026 | Spike-Driven Lightweight Large Language Model With Evolutionary ComputationabstractLarge Language Models (LLMs) have demonstrated remarkable capabilities across various tasks, but their deployment in resource-constrained environments remains challenging due to substantial memory and computational requirements. Benefiting from the sparse event-driven computation paradigm of Spiking Neural Networks (SNNs), some research has focused on designing spike-based language models. However, existing spike-based language models achieve only partial computational efficiency gains and fail to address memory constraints comprehensively. In this paper, we propose an evolved and quantized spike-driven language model (EQ-SpikeLM) to address identified challenges. This model incorporates two primary innovations. First, inspired by the artificial bee colony algorithm in evolutionary computation, we propose an architecture evolution method, namely ABC-Arc. This method optimizes network topology by systematically removing redundant neural pathways. Second, a dynamic post-training quantization (DynPTQ) strategy is developed for the evolved SpikeLM, facilitating the conversion of floating-point parameters to lower-bit precision without requiring model retraining. By combining these two methods, EQ-SpikeLM significantly reduces storage and computational demands while preserving model performance. Experimental evaluation on the GLUE benchmark demonstrates EQ-SpikeLM’s ability to maintain performance equivalent to its uncompressed counterpart, with a substantial reduction in both model size and power consumption. These results position EQ-SpikeLM as a viable approach for deploying large language models in resource-constrained edge computing scenarios. Malu Zhang, Wenjie Wei, Zijian Zhou 0005, Wanlong Liu, Jie Zhang 0118, Ammar Belatreche, Yang Yang 0002 |
IEEE Trans. Evol. Comput. | 2 |
| 2025 | Towards Accurate Binary Spiking Neural Networks: Learning with Adaptive Gradient Modulation MechanismabstractBinary Spiking Neural Networks (BSNNs) inherit the event-driven paradigm of SNNs, while also adopting the reduced storage burden of binarization techniques. These distinct advantages grant BSNNs lightweight and energy-efficient characteristics, rendering them ideal for deployment on resource-constrained edge devices. However, due to the binary synaptic weights and non-differentiable spike function, effectively training BSNNs remains an open question. In this paper, we conduct an in-depth analysis of the challenge for BSNN learning, namely the frequent weight sign flipping problem. To mitigate this issue, we propose an Adaptive Gradient Modulation Mechanism (AGMM), which is designed to reduce the frequency of weight sign flipping by adaptively adjusting the gradients during the learning process. The proposed AGMM can enable BSNNs to achieve faster convergence speed and higher accuracy, effectively narrowing the gap between BSNNs and their full-precision equivalents. We validate AGMM on both static and neuromorphic datasets, and results indicate that it achieves state-of-the-art results among BSNNs. This work substantially reduces storage demands and enhances SNNs' inherent energy efficiency, making them highly feasible for resource-constrained environments. Wenjie Wei, Ammar Belatreche, Honglin Cao, Zijian Zhou 0005, Shuai Wang 0058, Malu Zhang, Yang Yang 0002 |
AAAI | 2 |
| 2025 | Cross-Domain Fake News Detection based on Dual-Granularity Adversarial TrainingabstractCross-domain fake news detection, aiming to detect fake news in unseen domains, has achieved promising results with the help of pre-trained language models. Existing approaches mainly relied on extracting domain-independent representations or modeling domain discrepancies to achieve domain adaptation. However, we found that the relationship between entities in a piece of news and its corresponding label (fake or real) fluctuates among different domains. Such discrepancy is ignored by existing methods, leading to model entity bias. Therefore, in this paper, we propose a novel cross-domain fake news detection method based on dual-granularity adversarial training from the perspective of document-level and entity-level. Specifically, both the news pieces and their entities are modeled individually to construct an encoder that can generate domain-independent representations using adversarial training. Moreover, the dual-granularity soft prompt, consisting of two independent learnable segments trained on the source domains, is employed to make the model easily adapt to the unseen target domains. In addition, MultiFC, a released dataset for cross domain fake news detection, is not suitable for the evaluation due to its unreasonable domain construction rules. We artificially reconstructed the dataset and named it New-MultiFC, which is a more domain-discriminative dataset. Experimental results on both the newly constructed New-MultiFC and FND3 show the effectiveness of the proposed approach, achieving the state-of-the-art results in unseen domains. Wenjie Wei, Yanyue Zhang, Panfei Liu |
COLING | 1 |
| 2025 | Rethinking Spiking Self-Attention Mechanism: Implementing a-XNOR Similarity Calculation in Spiking TransformersabstractTransformers significantly raise the performance limits across various tasks, spurring research into integrating them into spiking neural networks. However, a notable performance gap remains between existing spiking Transformers and their artificial neural network counterparts. Here, we first analyze the cause of this gap and attribute it to the dot product’s ineffectiveness in measuring similarity between spiking queries and keys, due to numerous non-spiking events. To address this, we propose a novel α-XNOR similarity measure tailored for spike trains. It redefines the correlation between non-spike pairs as a specific value α, effectively overcoming the limitations of dot-product similarity. Furthermore, considering the sparse nature of spike trains where spikes carry more information than non-spikes, the α-XNOR similarity correspondingly highlights the distinct importance of spikes over non-spikes. Extensive experiments demonstrate that α-XNOR similarity significantly improves performance across different spiking Transformer architectures on various static and neuromorphic datasets, further revealing the potential of spiking Transformers. Yichen Xiao, Shuai Wang 0058, Dehao Zhang, Wenjie Wei, Yimeng Shan, Yulin Jiang, Malu Zhang |
CVPR | 4 |
| 2025 | Memory-Free and Parallel Computation for Quantized Spiking Neural NetworksabstractQuantized Spiking Neural Networks (QSNNs) offer superior energy efficiency and are well-suited for deployment on resource-limited edge devices. However, limited bit-width weight and membrane potential result in a notable performance decline. In this study, we first identify a new underlying cause for this decline: the loss of historical information due to the quantized membrane potential. To tackle this issue, we introduce a memory-free quantization method that captures all historical information without directly storing membrane potentials, resulting in better performance with less memory requirements. To further improve the computational efficiency, we propose a parallel training and asynchronous inference framework that greatly increases training speed and energy efficiency. We combine the proposed memory-free quantization and parallel computation methods to develop a high-performance and efficient QSNN, named MFP-QSNN. Extensive experiments show that our MFP-QSNN achieves state-of-the-art performance on various static and neuromorphic image datasets, requiring less memory and faster training speeds. The efficiency and efficacy of the MFP-QSNN highlight its potential for energy-efficient neuromorphic computing. Dehao Zhang, Shuai Wang 0058, Yichen Xiao, Wenjie Wei, Yimeng Shan, Malu Zhang, Yang Yang 0002 |
ICASSP | 4 |
| 2025 | Quantized Spike-driven TransformerabstractSpiking neural networks (SNNs) are emerging as a promising energy-efficient alternative to traditional artificial neural networks (ANNs) due to their spike-driven paradigm.
However, recent research in the SNN domain has mainly focused on enhancing accuracy by designing large-scale Transformer structures, which typically rely on substantial computational resources, limiting their deployment on resource-constrained devices.
To overcome this challenge, we propose a quantized spike-driven Transformer baseline (QSD-Transformer), which achieves reduced resource demands by utilizing a low bit-width parameter.
Regrettably, the QSD-Transformer often suffers from severe performance degradation.
In this paper, we first conduct empirical analysis and find that the bimodal distribution of quantized spike-driven self-attention (Q-SDSA) leads to spike information distortion (SID) during quantization, causing significant performance degradation. To mitigate this issue, we take inspiration from mutual information entropy and propose a bi-level optimization strategy to rectify the information distribution in Q-SDSA.
Specifically, at the lower level, we introduce an information-enhanced LIF to rectify the information distribution in Q-SDSA.
At the upper level, we propose a fine-grained distillation scheme for the QSD-Transformer to align the distribution in Q-SDSA with that in the counterpart ANN.
By integrating the bi-level optimization strategy, the QSD-Transformer can attain enhanced energy efficiency without sacrificing its high-performance advantage.
We validate the QSD-Transformer on various visual tasks, and experimental results indicate that our method achieves state-of-the-art results in the SNN domain.
For instance, when compared to the prior SNN benchmark on ImageNet, the QSD-Transformer achieves 80.3\% top-1 accuracy, accompanied by significant reductions of 6.0$\times$ and 8.1$\times$ in power consumption and model size, respectively. Code is available at https://github.com/bollossom/QSD-Transformer. Xuerui Qiu, Malu Zhang, Jieyuan Zhang, Wenjie Wei, Honglin Cao, Junsheng Guo, Rui-Jie Zhu 0003, Yimeng Shan, Yang Yang 0002, Haizhou Li 0001 |
ICLR | 4 |
| 2025 | QP-SNN: Quantized and Pruned Spiking Neural NetworksabstractBrain-inspired Spiking Neural Networks (SNNs) leverage sparse spikes to encode information and operate in an asynchronous event-driven manner, offering a highly energy-efficient paradigm for machine intelligence. However, the current SNN community focuses primarily on performance improvement by developing large-scale models, which limits the applicability of SNNs in resource-limited edge devices. In this paper, we propose a hardware-friendly and lightweight SNN, aimed at effectively deploying high-performance SNN in resource-limited scenarios. Specifically, we first develop a baseline model that integrates uniform quantization and structured pruning, called QP-SNN baseline. While this baseline significantly reduces storage demands and computational costs, it suffers from performance decline. To address this, we conduct an in-depth analysis of the challenges in quantization and pruning that lead to performance degradation and propose solutions to enhance the baseline's performance. For weight quantization, we propose a weight rescaling strategy that utilizes bit width more effectively to enhance the model's representation capability. For structured pruning, we propose a novel pruning criterion using the singular value of spatiotemporal spike activities to enable more accurate removal of redundant kernels. Extensive experiments demonstrate that integrating two proposed methods into the baseline allows QP-SNN to achieve state-of-the-art performance and efficiency, underscoring its potential for enhancing SNN deployment in edge intelligence computing. Wenjie Wei, Malu Zhang, Zijian Zhou 0005, Ammar Belatreche, Yimeng Shan, Honglin Cao, Jieyuan Zhang, Yang Yang 0002 |
ICLR | 1 |
| 2025 | BSO: Binary Spiking Online Optimization AlgorithmabstractBinary Spiking Neural Networks (BSNNs) offer promising efficiency advantages for resource-constrained computing. However, their training algorithms often require substantial memory overhead due to latent weights storage and temporal processing requirements. To address this issue, we propose Binary Spiking Online (BSO) optimization algorithm, a novel online training algorithm that significantly reduces training memory. BSO directly updates weights through flip signals under the online training framework. These signals are triggered when the product of gradient momentum and weights exceeds a threshold, eliminating the need for latent weights during training. To enhance performance, we propose T-BSO, a temporal-aware variant that leverages the inherent temporal dynamics of BSNNs by capturing gradient information across time steps for adaptive threshold adjustment. Theoretical analysis establishes convergence guarantees for both BSO and T-BSO, with formal regret bounds characterizing their convergence rates. Extensive experiments demonstrate that both BSO and T-BSO achieve superior optimization performance compared to existing training methods for BSNNs. The codes are available at https://github.com/hamingsi/BSO. Wenjie Wei, Ammar Belatreche, Shuai Wang 0058, Malu Zhang, Yang Yang 0002 |
ICML | 3 |
| 2025 | Adaptive Sensitivity Analysis for Robust Augmentation against Natural Corruptions in Image SegmentationabstractAchieving robustness in image segmentation models is challenging due to the fine-grained nature of pixel-level classification. These models, which are crucial for many real-time perception applications, particularly struggle when faced with natural corruptions in the wild for autonomous systems. While sensitivity analysis can help us understand how input variables influence model outputs, its application to natural and uncontrollable corruptions in training data is computationally expensive. In this work, we present an adaptive, sensitivity-guided augmentation method to enhance robustness against natural corruptions. Our sensitivity analysis on average runs 10 times faster and requires about 200 times less storage than previous sensitivity analysis, enabling practical, on-the-fly estimation during training for a model-free augmentation policy. With minimal fine-tuning, our sensitivity-guided augmentation method achieves improved robustness on both real-world and synthetic datasets compared to state-of-the-art data augmentation techniques in image segmentation. Laura Yu Zheng, Wenjie Wei, Jacob Clements, Shreelekha Revankar, Andre Harrison, Ming C. Lin |
ICML | 2 |
| 2025 | Binary Event-Driven Spiking TransformerabstractTransformer-based Spiking Neural Networks (SNNs) introduce a novel event-driven self-attention paradigm that combines the high performance of Transformers with the energy efficiency of SNNs. However, the larger model size and increased computational demands of the Transformer structure limit their practicality in resource-constrained scenarios. In this paper, we integrate binarization techniques into Transformer-based SNNs and propose the Binary Event-Driven Spiking Transformer, i.e. BESTformer. The proposed BESTformer can significantly reduce storage and computational demands by representing weights and attention maps with a mere 1-bit. However, BESTformer suffers from a severe performance drop from its full-precision counterpart due to the limited representation capability of binarization. To address this issue, we propose a Coupled Information Enhancement (CIE) method, which consists of a reversible framework and information enhancement distillation. By maximizing the mutual information between the binary model and its full-precision counterpart, the CIE method effectively mitigates the performance degradation of the BESTformer. Extensive experiments on static and neuromorphic datasets demonstrate that our method achieves superior performance to other binary SNNs, showcasing its potential as a compact yet high-performance model for resource-limited edge devices. The repository of this paper is available at https://github.com/CaoHLin/BESTFormer. Honglin Cao, Zijian Zhou 0005, Wenjie Wei, Ammar Belatreche, Dehao Zhang, Malu Zhang, Yang Yang 0002, Haizhou Li 0001 |
IJCAI | 3 |
| 2025 | Temporal-coded Spiking TransformerabstractSpiking Neural Networks (SNNs) have garnered significant attention due to their biological plausibility and low power consumption. While spiking transformers enhance performance by combining SNNs with transformer architecture, most rely on rate coding, limiting energy efficiency. Temporal coding methods, such as Time-To-First-Spike (TTFS) coding, offer a more efficient alternative by encoding information based on the timing of a single spike. However, integrating TTFS with transformer architecture faces challenges due to incompatibility with batch normalization (BN) and residual connections (RC), which disrupt the precise spike firing times. In this paper, we propose temporal-coded BN (tBN) and temporal-coded RC (tRC) to address these issues. Building on tBN and tRC, we develop temporal-coded spiking attention (TSA) and temporal-coded spiking transformer (T-SpikeFormer), the first to combine TTFS coding with transformer architecture. Experimental results show our model achieves state-of-the-art performance for temporal-coded SNNs and comparable results to rate-coded SNNs while significantly reducing power consumption. Qian Sun 0014, Chengzhuo Lu, Wenyu Chen 0001, Wenjie Wei, Jieyuan Zhang, Yalan Ye, Yang Yang 0002, Malu Zhang |
ACM Multimedia | 4 |
| 2025 | S2NN: Sub-bit Spiking Neural NetworksabstractSpiking Neural Networks (SNNs) offer an energy-efficient paradigm for machine intelligence, but their continued scaling poses challenges for resource-limited deployment. Despite recent advances in binary SNNs, the storage and computational demands remain substantial for large-scale networks. To further explore the compression and acceleration potential of SNNs, we propose Sub-bit Spiking Neural Networks (S$^2$NNs) that represent weights with less than one bit. Specifically, we first establish an S$^2$NN baseline by leveraging the clustering patterns of kernels in well-trained binary SNNs. This baseline is highly efficient but suffers from \textit{outlier-induced codeword selection bias} during training. To mitigate this issue, we propose an \textit{outlier-aware sub-bit weight quantization} (OS-Quant) method, which optimizes codeword selection by identifying and adaptively scaling outliers. Furthermore, we propose a \textit{membrane potential-based feature distillation} (MPFD) method, improving the performance of highly compressed S$^2$NN via more precise guidance from a teacher model. Extensive results on vision reveal that S$^2$NN outperforms existing quantized SNNs in both performance and efficiency, making it promising for edge computing applications. Wenjie Wei, Malu Zhang, Jieyuan Zhang, Ammar Belatreche, Shuai Wang 0058, Yimeng Shan, Honglin Cao, Guoqing Wang 0001, Yang Yang 0002, Haizhou Li 0001 |
NeurIPS | 1 |
| 2025 | Unveiling the Spatial-temporal Effective Receptive Fields of Spiking Neural NetworksabstractSpiking Neural Networks (SNNs) demonstrate significant potential for energy-efficient neuromorphic computing through an event-driven paradigm. While training methods and computational models have greatly advanced, SNNs struggle to achieve competitive performance in visual long-sequence modeling tasks. In artificial neural networks, the effective receptive field (ERF) serves as a valuable tool for analyzing feature extraction capabilities in visual long-sequence modeling. Inspired by this, we introduce the Spatio-Temporal Effective Receptive Field (ST-ERF) to analyze the ERF distributions across various Transformer-based SNNs. Based on the proposed ST-ERF, we reveal that these models suffer from establishing a robust global ST-ERF, thereby limiting their visual feature modeling capabilities. To overcome this issue, we propose two novel channel-mixer architectures: \underline{m}ulti-\underline{l}ayer-\underline{p}erceptron-based m\underline{ixer} (MLPixer) and \underline{s}plash-and-\underline{r}econstruct \underline{b}lock (SRB). These architectures enhance global spatial ERF through all timesteps in early network stages of Transformer-based SNNs, improving performance on challenging visual long-sequence modeling tasks. Extensive experiments conducted on the Meta-SDT variants and across object detection and semantic segmentation tasks further validate the effectiveness of our proposed method. Beyond these specific applications, we believe the proposed ST-ERF framework can provide valuable insights for designing and optimizing SNN architectures across a broader range of tasks. The code is available at \href{https://github.com/EricZhang1412/Spatial-temporal-ERF}{\faGithub~EricZhang1412/Spatial-temporal-ERF}. Jieyuan Zhang, Shuai Wang 0058, Wenjie Wei, Qian Sun 0014, Malu Zhang, Yang Yang 0002, Haizhou Li 0001 |
NeurIPS | 4 |
| 2025 | Dendritic Resonate-and-Fire Neuron for Effective and Efficient Long Sequence ModelingabstractThe explosive growth in sequence length has intensified the demand for effective and efficient long sequence modeling. Benefiting from intrinsic oscillatory membrane dynamics, Resonate-and-Fire (RF) neurons can efficiently extract frequency components from input signals and encode them into spatiotemporal spike trains, making them well-suited for long sequence modeling. However, RF neurons exhibit limited effective memory capacity and a trade-off between energy efficiency and training speed on complex temporal tasks. Inspired by the dendritic structure of biological neurons, we propose a Dendritic Resonate-and-Fire (D-RF) model, which explicitly incorporates a multi-dendritic and soma architecture. Each dendritic branch encodes specific frequency bands by utilizing the intrinsic oscillatory dynamics of RF neurons, thereby collectively achieving comprehensive frequency representation. Furthermore, we introduce an adaptive threshold mechanism into the soma structure. This mechanism adjusts the firing threshold according to historical spiking activity, thereby reducing redundant spikes while maintaining training efficiency in long-sequence tasks. Extensive experiments demonstrate that our method maintains competitive accuracy while substantially ensuring sparse spikes without compromising computational efficiency during training. These results underscore its potential as an effective and efficient solution for long sequence modeling on edge platforms. Dehao Zhang, Malu Zhang, Shuai Wang 0058, Wenjie Wei, Zeyu Ma 0002, Guoqing Wang 0001, Yang Yang 0002, Haizhou Li 0001 |
NeurIPS | 5 |
| 2025 | wgatools: an ultrafast toolkit for manipulating whole-genome alignmentsabstractSUMMARY: With the rapid development of long-read sequencing technologies, the era of individual complete genomes is approaching. We have developed wgatools, a cross-platform, ultrafast toolkit that supports a range of whole-genome alignment formats, offering practical tools for conversion, processing, evaluation, and visualization of alignments, thereby facilitating population-level genome analysis and advancing functional and evolutionary genomics. AVAILABILITY AND IMPLEMENTATION: wgatools supports diverse formats and can process, filter, and statistically evaluate alignments, perform alignment-based variant calling, and visualize alignments both locally and genome-wide. Built with Rust for efficiency and safe memory usage, it ensures fast performance and can handle large datasets consisting of hundreds of genomes. wgatools is published as free software under the MIT open-source license, and its source code is freely available at https://github.com/wjwei-handsome/wgatools and https://zenodo.org/records/14882797. Wenjie Wei, Songtao Gui, Erik Garrison, Jianbing Yan, Hai-Jun Liu |
Bioinform. | 1 |
| 2025 | ESTSformer: Efficient spatio-temporal spiking transformer
Chengzhuo Lu, Huilin Du, Wenjie Wei, Qian Sun 0014, Dingyi Zeng, Wenyu Chen 0001, Malu Zhang, Yang Yang 0002 |
Neural Networks | 3 |
| 2025 | Ternary spike-based neuromorphic signal processing system
Shuai Wang 0058, Dehao Zhang, Ammar Belatreche, Yichen Xiao, Hongyu Qing, Wenjie Wei, Malu Zhang, Yang Yang 0002 |
Neural Networks | 6 |
| 2024 | Global-Local Convolution with Spiking Neural Networks for Energy-efficient Keyword Spottingabstract25th Annual Conference of the International Speech Communication Association, Interspeech 2024, Kos, Greece, September 1-5, 2024. ISCA 2024 Shuai Wang 0058, Dehao Zhang, Wenjie Wei, Jibin Wu, Malu Zhang |
INTERSPEECH | 5 |
| 2024 | Q-SNNs: Quantized Spiking Neural NetworksabstractBrain-inspired Spiking Neural Networks (SNNs) leverage sparse spikes to represent information and process them in an asynchronous event-driven manner, offering an energy-efficient paradigm for the next generation of machine intelligence. However, the current focus within the SNN community prioritizes accuracy optimization through the development of large-scale models, limiting their viability in resource-constrained and low-power edge devices. To address this challenge, we introduce a lightweight and hardware-friendly Quantized SNN (Q-SNN) that applies quantization to both synaptic weights and membrane potentials. By significantly compressing these two key elements, the proposed Q-SNNs substantially reduce both memory usage and computational complexity. Moreover, to prevent the performance degradation caused by this compression, we present a new Weight-Spike Dual Regulation (WS-DR) method inspired by information entropy theory. Experimental evaluations on various datasets, including static and neuromorphic, demonstrate that our Q-SNNs outperform existing methods in terms of both model size and accuracy. These state-of-the-art results in efficiency and efficacy suggest that the proposed method can significantly improve edge intelligent computing. Wenjie Wei, Ammar Belatreche, Yichen Xiao, Honglin Cao, Zhenbang Ren, Guoqing Wang 0003, Malu Zhang, Yang Yang 0002 |
ACM Multimedia | 1 |
| 2024 | Spike-based Neuromorphic Model for Sound Source LocalizationabstractBiological systems possess remarkable sound source localization (SSL) capabilities that are critical for survival in complex environments. This ability arises from the collaboration between the auditory periphery, which encodes sound as precisely timed spikes, and the auditory cortex, which performs spike-based computations. Inspired by these biological mechanisms, we propose a novel neuromorphic SSL framework that integrates spike-based neural encoding and computation. The framework employs Resonate-and-Fire (RF) neurons with a phase-locking coding (RF-PLC) method to achieve energy-efficient audio processing. The RF-PLC method leverages the resonance properties of RF neurons to efficiently convert audio signals to time-frequency representation and encode interaural time difference (ITD) cues into discriminative spike patterns. In addition, biological adaptations like frequency band selectivity and short-term memory effectively filter out many environmental noises, enhancing SSL capabilities in real-world settings. Inspired by these adaptations, we propose a spike-driven multi-auditory attention (MAA) module that significantly improves both the accuracy and robustness of the proposed SSL framework. Extensive experimentation demonstrates that our SSL framework achieves state-of-the-art accuracy in SSL tasks. Furthermore, it shows exceptional noise robustness and maintains high accuracy even at very low signal-to-noise ratios. By mimicking biological hearing, this neuromorphic approach contributes to the development of high-performance and explainable artificial intelligence systems capable of superior performance in real-world environments. Dehao Zhang, Shuai Wang 0058, Ammar Belatreche, Wenjie Wei, Yichen Xiao, Haorui Zheng, Zijian Zhou 0005, Malu Zhang, Yang Yang 0002 |
NeurIPS | 4 |
| 2023 | Temporal-Coded Spiking Neural Networks with Dynamic Firing Threshold: Learning with Event-Driven BackpropagationabstractSpiking Neural Networks (SNNs) offer a highly promising computing paradigm due to their biological plausibility, exceptional spatiotemporal information processing capability and low power consumption. As a temporal encoding scheme for SNNs, Time-To-First-Spike (TTFS) encodes information using the timing of a single spike, which allows spiking neurons to transmit information through sparse spike trains and results in lower power consumption and higher computational efficiency compared to traditional rate-based encoding counterparts. However, despite the advantages of the TTFS encoding scheme, the effective and efficient training of TTFS-based deep SNNs remains a significant and open research problem. In this work, we first examine the factors underlying the limitations of applying existing TTFS-based learning algorithms to deep SNNs. Specifically, we investigate issues related to over-sparsity of spikes and the complexity of finding the ‘causal set'. We then propose a simple yet efficient dynamic firing threshold (DFT) mechanism for spiking neurons to address these issues. Building upon the proposed DFT mechanism, we further introduce a novel direct training algorithm for TTFS-based deep SNNs, called DTA-TTFS. This method utilizes event-driven processing and spike timing to enable efficient learning of deep SNNs. The proposed training method was validated on the image classification task and experimental results clearly demonstrate that our proposed method achieves state-of-the-art accuracy in comparison to existing TTFS-based learning algorithms, while maintaining high levels of sparsity and energy efficiency on neuromorphic inference accelerator. Wenjie Wei, Malu Zhang, Hong Qu 0002, Ammar Belatreche, Jian Zhang 0020, Hong Chen 0002 |
ICCV | 1 |
| 2020 | Abstractive Summarization via Discourse Relation and Graph Convolutional Networks
Wenjie Wei, Hongling Wang |
NLPCC (2) | 1 |
| 2012 | Using 1000+ GPUs and 10000+ CPUs for Sedimentary Basin SimulationsabstractIn cutting-edge CPU/GPU hybrid clusters, such as Tianhe-1A, the aggregate CPU computing capability may amount to up to 1/3 of the aggregate GPU computing capability. It thus goes without saying that the CPUs and GPUs should jointly carry out the computational work. However, to effectively and simultaneously use both the hardware components requires great care when developing the parallel implementations. The challenges include (1) finding a balanced division of the workload between the CPU and GPU sides, and (2) hiding various overheads by overlapping computations with CPU-GPU data transfers and/or MPI communications. We study these issues in the context of real-world sedimentary basin simulations. Numerical experiments show that an appropriately devised CPU-GPU hybrid implementation is able to handle a global mesh resolution of 131,072*131,072, and a double-precision rate of 62 TFlops is achieved by using 1024 GPUs and 12288 CPU cores on Tianhe-1A. Such an extreme computing capability will be of great importance for carrying out high-resolution and continental-scale stratigraphic simulations in future. Mei Wen, Huayou Su, Wenjie Wei, Nan Wu 0003, Xing Cai, Chunyuan Zhang |
CLUSTER | 3 |
| 2010 | Numerical Analysis of a Dual-Sediment Transport Model Applied to Lake Okeechobee, FloridaabstractWe have studied two numerical strategies for solving a coupled system of dictinct nonlinear equations governing sediment transport in Lake Okeechobee. Using high-resolution bathymetry data of Lake Okeechobee, Florida, we study the numerical properties of the two strategies, from 1 core to 512 cores. The fully-explicit scheme is straightforward to implement and requires a relatively small amount of computation per time step. However, this simple numerical strategy has to use small time steps to ensure stability. These small time steps may render the explicit solver impractical for long-term and high-resolution basin simulations. As a comparison, we have implemented a semi-implicit scheme, where the two partial differential equations at each time step are solved implicitly in sequence. Numerical experiments show that this semi-implicit scheme is numerically stable even for very large time steps. Using a multicore-based cluster, we have carried out parallel simulations of sediment transport along a river chanel and into Lake Okeechobee. Stuart R. Clark, Wenjie Wei, Xing Cai |
ISPDC | 2 |