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Atalanti-Anastasia Mastakouri

dblp:200/8042 · also Anastasia-Atalanti Mastakouri · DBLP profile ↗
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11ranked-venue papers
4as first author
8since 2021 · last 2025
—ORCID · none

Domains — the database's venue-derived domains; a paper can count in several

Artificial intelligence and machine learning · 10 · 3 first-author · 8 since 2021Graphics, computer vision, multimedia, augmented reality and games · 1 · 1 since 2021Human-computer interaction and ubiquitous computing · 1 · 1 first-authorApplied, interdisciplinary, general and emerging computing · 1 · 1 first-author

Expertise — from the expertise taxonomy: the topics of the expert's papers under the CCF categories. A weight counts papers with recency: 1 for a paper about the topic, 0.3 when the topic is its context, halved every five years.

Artificial intelligence
7 papers
Probabilistic and Bayesian machine learning · 48% Trustworthy machine learning · 38% Question answering and dialogue systems · 7%
Interdisciplinary, comprehensive, and emerging computing
2 papers
Medical and health informatics · 54% Bioinformatics and computational biology · 46%

Topics — the 17 heaviest of 17, each with the papers that count most for it

TopicWeightPapersLastEvidence papers
Machine learning › Probabilistic and Bayesian machine learning
causal inference
2.442025
Toward Falsifying Causal Graphs Using a Permutation-Based Test · AAAI 2025
DoWhy-GCM: An Extension of DoWhy for Causal Inference in Graphical Causal Models · J. Mach. Learn. Res. 2024
Causal analysis of Covid-19 Spread in Germany · NeurIPS 2020
Machine learning › Probabilistic and Bayesian machine learning › causal inference
causal discovery
1.432025
Assumption violations in causal discovery and the robustness of score matching · NeurIPS 2023
Causal analysis of Covid-19 Spread in Germany · NeurIPS 2020
Toward Falsifying Causal Graphs Using a Permutation-Based Test · AAAI 2025
Machine learning › Trustworthy machine learning › causal machine learning
causal feature selection
1.332021
Necessary and sufficient conditions for causal feature selection in time series with latent common causes · ICML 2021
Causal analysis of Covid-19 Spread in Germany · NeurIPS 2020
Selecting causal brain features with a single conditional independence test per feature · NeurIPS 2019
Machine learning › Trustworthy machine learning
calibration
0.912025
QA-Calibration of Language Model Confidence Scores · ICLR 2025
Machine learning › Trustworthy machine learning › calibration
confidence calibration
0.912025
QA-Calibration of Language Model Confidence Scores · ICLR 2025
Natural language and speech › Question answering and dialogue systems › answer generation
generative question answering
0.912025
QA-Calibration of Language Model Confidence Scores · ICLR 2025
Machine learning › Trustworthy machine learning
uncertainty estimation
0.912025
QA-Calibration of Language Model Confidence Scores · ICLR 2025
Knowledge, reasoning and agents › Knowledge representation and reasoning › causal reasoning
causal graphical model
0.812024
DoWhy-GCM: An Extension of DoWhy for Causal Inference in Graphical Causal Models · J. Mach. Learn. Res. 2024
Machine learning › Probabilistic and Bayesian machine learning › causal inference
root cause analysis
0.812024
DoWhy-GCM: An Extension of DoWhy for Causal Inference in Graphical Causal Models · J. Mach. Learn. Res. 2024
Machine learning › Trustworthy machine learning
robustness
0.712023
Assumption violations in causal discovery and the robustness of score matching · NeurIPS 2023
Machine learning › Probabilistic and Bayesian machine learning › causal inference › causal discovery
score-based causal discovery
0.712023
Assumption violations in causal discovery and the robustness of score matching · NeurIPS 2023
Medical and health informatics › epidemic modeling
COVID-19 spread modeling
0.412020
Causal analysis of Covid-19 Spread in Germany · NeurIPS 2020
Medical and health informatics
epidemiology
0.412020
Causal analysis of Covid-19 Spread in Germany · NeurIPS 2020
Machine learning › Probabilistic and Bayesian machine learning › structured models › graphical models › conditional independence
conditional independence testing
0.412019
Selecting causal brain features with a single conditional independence test per feature · NeurIPS 2019
Bioinformatics and computational biology › neuroscience › neuroinformatics › neural data analysis
brain signal analysis
0.412019
Selecting causal brain features with a single conditional independence test per feature · NeurIPS 2019
Bioinformatics and computational biology › neuroscience
neuroinformatics
0.412019
Selecting causal brain features with a single conditional independence test per feature · NeurIPS 2019
Machine learning › Probabilistic and Bayesian machine learning › causal inference › causal discovery
time series causal discovery
0.112021
Necessary and sufficient conditions for causal feature selection in time series with latent common causes · ICML 2021

Methods — techniques the papers use, named apart from their topics

constraint-based causal discovery · 2.1post-hoc calibration · 0.9permutation-based test · 0.9discretized calibration · 0.9consistency metric · 0.9causal mechanism fitting · 0.8causal graph · 0.8score matching · 0.7benchmarking · 0.7conditional independence test · 0.5latent confounders · 0.4encephalography · 0.4
YearPublicationVenuePosition
2025 Toward Falsifying Causal Graphs Using a Permutation-Based Test
abstract
Understanding causal relationships among the variables of a system is paramount to explain and control its behavior. For many real-world systems, however, the true causal graph is not readily available and one must resort to predictions made by algorithms or domain experts. Therefore, metrics that quantitatively assess the goodness of a causal graph provide helpful checks before using it in downstream tasks. Existing metrics provide an absolute number of inconsistencies between the graph and the observed data, and without a baseline, practitioners are left to answer the hard question of how many such inconsistencies are acceptable or expected. Here, we propose a novel consistency metric by constructing a baseline through node permutations. By comparing the number of inconsistencies with those on the baseline, we derive an interpretable metric that captures whether the graph is significantly better than random. Evaluating on both simulated and real data sets from various domains, including biology and cloud monitoring, we demonstrate that the true graph is not falsified by our metric, whereas the wrong graphs given by a hypothetical user are likely to be falsified.
Elias Eulig, Atalanti-Anastasia Mastakouri, Patrick Blöbaum, Michaela Hardt, Dominik Janzing
AAAI2
2025 QA-Calibration of Language Model Confidence Scores
abstract
To use generative question-and-answering (QA) systems for decision-making and in any critical application, these systems need to provide well-calibrated confidence scores that reflect the correctness of their answers. Existing calibration methods aim to ensure that the confidence score is, *on average*, indicative of the likelihood that the answer is correct. We argue, however, that this standard (average-case) notion of calibration is difficult to interpret for decision-making in generative QA. To address this, we generalize the standard notion of average calibration and introduce QA-calibration, which ensures calibration holds across different question-and-answer groups. We then propose discretized posthoc calibration schemes for achieving QA-calibration. We establish distribution-free guarantees on the performance of this method and validate our method on confidence scores returned by elicitation prompts across multiple QA benchmarks and large language models (LLMs).
Putra Manggala, Atalanti-Anastasia Mastakouri, Elke Kirschbaum, Shiva Prasad Kasiviswanathan, Aaditya Ramdas
ICLR2
2024 Self-Compatibility: Evaluating Causal Discovery without Ground Truth
Philipp Michael Faller, Leena C. Vankadara, Atalanti-Anastasia Mastakouri, Francesco Locatello, Dominik Janzing
AISTATS3
2024 Quantifying intrinsic causal contributions via structure preserving interventions
abstract
We propose a notion of causal influence that describes the ‘intrinsic’ part of the contribution of a node on a target node in a DAG. By recursively writing each node as a function of the upstream noise terms, we separate the intrinsic information added by each node from the one obtained from its ancestors. To interpret the intrinsic information as a causal contribution, we consider ‘structure-preserving interventions’ that randomize each node in a way that mimics the usual dependence on the parents and does not perturb the observed joint distribution. To get a measure that is invariant across arbitrary orderings of nodes we use Shapley based symmetrization and show that it reduces in the linear case to simple ANOVA after resolving the target node into noise variables. We describe our contribution analysis for variance and entropy, but contributions for other target metrics can be defined analogously.
Dominik Janzing, Patrick Blöbaum, Atalanti-Anastasia Mastakouri, Philipp Michael Faller, Lenon Minorics, Kailash Budhathoki
AISTATS3
2024 DoWhy-GCM: An Extension of DoWhy for Causal Inference in Graphical Causal Models
abstract
We present DoWhy-GCM, an extension of the DoWhy Python library, which leverages graphical causal models. Unlike existing causality libraries, which mainly focus on effect estimation, DoWhy-GCM addresses diverse causal queries, such as identifying the root causes of outliers and distributional changes, attributing causal influences to the data generating process of each node, or diagnosis of causal structures. With DoWhy-GCM, users typically specify cause-effect relations via a causal graph, fit causal mechanisms, and pose causal queries---all with just a few lines of code. The general documentation is available at https://www.pywhy.org/dowhy and the DoWhy-GCM specific code at https://github.com/py-why/dowhy/tree/main/dowhy/gcm.
Patrick Blöbaum, Peter Götz, Kailash Budhathoki, Atalanti-Anastasia Mastakouri, Dominik Janzing
J. Mach. Learn. Res.4
2023 Assumption violations in causal discovery and the robustness of score matching
abstract
When domain knowledge is limited and experimentation is restricted by ethical, financial, or time constraints, practitioners turn to observational causal discovery methods to recover the causal structure, exploiting the statistical properties of their data. Because causal discovery without further assumptions is an ill-posed problem, each algorithm comes with its own set of usually untestable assumptions, some of which are hard to meet in real datasets. Motivated by these considerations, this paper extensively benchmarks the empirical performance of recent causal discovery methods on observational _iid_ data generated under different background conditions, allowing for violations of the critical assumptions required by each selected approach. Our experimental findings show that score matching-based methods demonstrate surprising performance in the false positive and false negative rate of the inferred graph in these challenging scenarios, and we provide theoretical insights into their performance. This work is also the first effort to benchmark the stability of causal discovery algorithms with respect to the values of their hyperparameters. Finally, we hope this paper will set a new standard for the evaluation of causal discovery methods and can serve as an accessible entry point for practitioners interested in the field, highlighting the empirical implications of different algorithm choices.
Francesco Montagna, Atalanti-Anastasia Mastakouri, Elias Eulig, Nicoletta Noceti, Lorenzo Rosasco, Dominik Janzing, Bryon Aragam, Francesco Locatello
NeurIPS2
2023 Causal information splitting: Engineering proxy features for robustness to distribution shifts
abstract
Statistical prediction models are often trained on data that is drawn from different probability distributions than their eventual use cases. One approach to proactively prepare for these shifts harnesses the intuition that causal mechanisms should remain invariant between environments. Here we focus on a challenging setting in which the causal and anticausal variables of the target are unobserved. Leaning on information theory, we develop feature selection and engineering techniques for the observed downstream variables that act as proxies. We identify proxies that help to build stable models and moreover utilize auxiliary training tasks to extract stability-enhancing information from proxies. We demonstrate the effectiveness of our techniques on synthetic and real data.
Bijan Mazaheri, Atalanti-Anastasia Mastakouri, Dominik Janzing, Michaela Hardt
UAI2
2021 Necessary and sufficient conditions for causal feature selection in time series with latent common causes
abstract
We study the identification of direct and indirect causes on time series with latent variables, and provide a constrained-based causal feature selection method, which we prove that is both sound and complete under some graph constraints. Our theory and estimation algorithm require only two conditional independence tests for each observed candidate time series to determine whether or not it is a cause of an observed target time series. Furthermore, our selection of the conditioning set is such that it improves signal to noise ratio. We apply our method on real data, and on a wide range of simulated experiments, which yield very low false positive and relatively low false negative rates.
Atalanti-Anastasia Mastakouri, Bernhard Schölkopf, Dominik Janzing
ICML1
2020 Causal analysis of Covid-19 Spread in Germany
abstract
In this work, we study the causal relations among German regions in terms of the spread of Covid-19 since the beginning of the pandemic, taking into account the restriction policies that were applied by the different federal states. We loose a strictly formulated assumption for a causal feature selection method for time series data, robust to latent confounders, which we subsequently apply on Covid-19 case numbers. We present findings about the spread of the virus in Germany and the causal impact of restriction measures, discussing the role of various policies in containing the spread. Since our results are based on rather limited target time series (only the numbers of reported cases), care should be exercised in interpreting them. However, it is encouraging that already such limited data seems to contain causal signals. This suggests that as more data becomes available, our causal approach may contribute towards meaningful causal analysis of political interventions on the development of Covid-19, and thus also towards the development of rational and data-driven methodologies for choosing interventions.
Atalanti-Anastasia Mastakouri, Bernhard Schölkopf
NeurIPS1
2019 Selecting causal brain features with a single conditional independence test per feature
abstract
We propose a constraint-based causal feature selection method for identifying causes of a given target variable, selecting from a set of candidate variables, while there can also be hidden variables acting as common causes with the target. We prove that if we observe a cause for each candidate cause, then a single conditional independence test with one conditioning variable is sufficient to decide whether a candidate associated with the target is indeed causing it. We thus improve upon existing methods by significantly simplifying statistical testing and requiring a weaker version of causal faithfulness. Our main assumption is inspired by neuroscience paradigms where the activity of a single neuron is considered to be also caused by its own previous state. We demonstrate successful application of our method to simulated, as well as encephalographic data of twenty-one participants, recorded in Max Planck Institute for intelligent Systems. The detected causes of motor performance are in accordance with the latest consensus about the neurophysiological pathways, and can provide new insights into personalised brain stimulation.
Atalanti-Anastasia Mastakouri, Bernhard Schölkopf, Dominik Janzing
NeurIPS1
2017 Personalized brain-computer interface models for motor rehabilitation
abstract
We propose to fuse two currently separate research lines on novel therapies for stroke rehabilitation: brain-computer interface (BCI) training and transcranial electrical stimulation (TES). Specifically, we show that BCI technology can be used to learn personalized decoding models that relate the global configuration of brain rhythms in individual subjects (as measured by EEG) to their motor performance during 3D reaching movements. We demonstrate that our models capture substantial across-subject heterogeneity, and argue that this heterogeneity is a likely cause of limited effect sizes observed in TES for enhancing motor performance. We conclude by discussing how our personalized models can be used to derive optimal TES parameters, e.g., stimulation site and frequency, for individual patients.
Atalanti-Anastasia Mastakouri, Sebastian Weichwald, Ozan Özdenizci, Timm Meyer, Bernhard Schölkopf, Moritz Grosse-Wentrup
SMC1