Demonstration venue · read-only. Every page can be browsed; the buttons that would change it are switched off. Create an account to run TaxoReview on your own data. A simulation from public publication records: the people listed were not invited and did not agree to review.
? Tutorial for this page

Matthew G. Perich

dblp:205/2626 · also Matt Perich · DBLP profile ↗
← Back
6ranked-venue papers
0as first author
6since 2021 · last 2025
—ORCID · none

Domains — the database's venue-derived domains; a paper can count in several

Artificial intelligence and machine learning · 6 · 6 since 2021

Expertise — from the expertise taxonomy: the topics of the expert's papers under the CCF categories. A weight counts papers with recency: 1 for a paper about the topic, 0.3 when the topic is its context, halved every five years.

Artificial intelligence
5 papers
Deep learning architectures and training · 17% Generative modeling · 14% Efficient and distributed learning · 14%
Interdisciplinary, comprehensive, and emerging computing
3 papers
Bioinformatics and computational biology · 88% Medical and health informatics · 12%

Topics — the 17 heaviest of 18, each with the papers that count most for it

TopicWeightPapersLastEvidence papers
Computer vision › 3D vision
brain decoding
0.912025
Generalizable, real-time neural decoding with hybrid state-space models · NeurIPS 2025
Machine learning › Efficient and distributed learning
inference efficiency
0.912025
Generalizable, real-time neural decoding with hybrid state-space models · NeurIPS 2025
Machine learning › Deep learning architectures and training
recurrent neural network
0.912025
Expressivity of Neural Networks with Random Weights and Learned Biases · ICLR 2025
Machine learning › Learning theory › approximation theory › neural network approximation
universal approximation
0.912025
Expressivity of Neural Networks with Random Weights and Learned Biases · ICLR 2025
Natural language and speech › Language models and text generation › large language model training
large-scale pretraining
0.712023
A Unified, Scalable Framework for Neural Population Decoding · NeurIPS 2023
Bioinformatics and computational biology › neuroscience › neuroinformatics
neural data analysis
0.712023
A Unified, Scalable Framework for Neural Population Decoding · NeurIPS 2023
Bioinformatics and computational biology › neuroscience › neuroinformatics › neural data analysis
neural population decoding
0.712023
A Unified, Scalable Framework for Neural Population Decoding · NeurIPS 2023
Machine learning › Generative modeling › variational autoencoder
sequential variational autoencoder
0.612022
Robust alignment of cross-session recordings of neural population activity by behaviour via unsupervised domain adaptation · ICML 2022
Machine learning › Transfer learning and domain adaptation › domain adaptation
unsupervised domain adaptation
0.612022
Robust alignment of cross-session recordings of neural population activity by behaviour via unsupervised domain adaptation · ICML 2022
Machine learning › Generative modeling
variational autoencoder
0.612022
Robust alignment of cross-session recordings of neural population activity by behaviour via unsupervised domain adaptation · ICML 2022
Bioinformatics and computational biology
computational neuroscience
0.612022
Robust alignment of cross-session recordings of neural population activity by behaviour via unsupervised domain adaptation · ICML 2022
Machine learning › Representation and self-supervised learning › representation learning › latent representation learning › state representation learning
latent dynamics model
0.512021
Targeted Neural Dynamical Modeling · NeurIPS 2021
Machine learning › Probabilistic and Bayesian machine learning › structured models
latent variable model
0.512021
Targeted Neural Dynamical Modeling · NeurIPS 2021
Machine learning › Representation and self-supervised learning
neural population activity
0.512021
Targeted Neural Dynamical Modeling · NeurIPS 2021
Machine learning › Deep learning architectures and training
state space model
0.512021
Targeted Neural Dynamical Modeling · NeurIPS 2021
Machine learning › Efficient and distributed learning
parameter-efficient fine-tuning
0.312025
Expressivity of Neural Networks with Random Weights and Learned Biases · ICLR 2025
Medical and health informatics
brain-computer interface
0.312025
Generalizable, real-time neural decoding with hybrid state-space models · NeurIPS 2025

Methods — techniques the papers use, named apart from their topics

cross-attention · 3.1state space model · 1.7pre-training · 1.7sequential variational autoencoder · 1.6spike tokenization · 1.3unsupervised domain adaptation · 1.1latent variable model · 1.1universal approximation theory · 0.9perceiver i/o · 0.7PerceiverIO · 0.7linear decoder · 0.5
YearPublicationVenuePosition
2025 Expressivity of Neural Networks with Random Weights and Learned Biases
abstract
Landmark universal function approximation results for neural networks with trained weights and biases provided the impetus for the ubiquitous use of neural networks as learning models in neuroscience and Artificial Intelligence (AI). Recent work has extended these results to networks in which a smaller subset of weights (e.g., output weights) are tuned, leaving other parameters random. However, it remains an open question whether universal approximation holds when only biases are learned, despite evidence from neuroscience and AI that biases significantly shape neural responses. The current paper answers this question. We provide theoretical and numerical evidence demonstrating that feedforward neural networks with fixed random weights can approximate any continuous function on compact sets. We further show an analogous result for the approximation of dynamical systems with recurrent neural networks. Our findings are relevant to neuroscience, where they demonstrate the potential for behaviourally relevant changes in dynamics without modifying synaptic weights, as well as for AI, where they shed light on recent fine-tuning methods for large language models, like bias and prefix-based approaches.
Ezekiel Williams, Alexandre Payeur, Avery Hee-Woon Ryoo, Thomas Jiralerspong, Matthew G. Perich, Luca Mazzucato, Guillaume Lajoie
ICLR5
2025 POCO: Scalable Neural Forecasting through Population Conditioning
abstract
Predicting future neural activity is a core challenge in modeling brain dynamics, with applications ranging from scientific investigation to closed-loop neurotechnology. While recent models of population activity emphasize interpretability and behavioral decoding, neural forecasting—particularly across multi-session, spontaneous recordings—remains underexplored. We introduce POCO, a unified forecasting model that combines a lightweight univariate forecaster with a population-level encoder to capture both neuron-specific and brain-wide dynamics. Trained across five calcium imaging datasets spanning zebrafish, mice, and *C. elegans*, POCO achieves state-of-the-art accuracy at cellular resolution in spontaneous behaviors. After pre-training, POCO rapidly adapts to new recordings with minimal fine-tuning. Notably, POCO's learned unit embeddings recover biologically meaningful structure—such as brain region clustering—without any anatomical labels. Our comprehensive analysis reveals several key factors influencing performance, including context length, session diversity, and preprocessing. Together, these results position POCO as a scalable and adaptable approach for cross-session neural forecasting and offer actionable insights for future model design. By enabling accurate, generalizable forecasting models of neural dynamics across individuals and species, POCO lays the groundwork for adaptive neurotechnologies and large-scale efforts for neural foundation models. Code is available at [https://github.com/yuvenduan/POCO](https://github.com/yuvenduan/POCO).
Hamza Tahir Chaudhry, Misha B. Ahrens, Christopher D. Harvey, Matthew G. Perich, Karl Deisseroth, Kanaka Rajan
NeurIPS5
2025 Generalizable, real-time neural decoding with hybrid state-space models
abstract
Real-time decoding of neural activity is central to neuroscience and neurotechnology applications, from closed-loop experiments to brain-computer interfaces, where models are subject to strict latency constraints. Traditional methods, including simple recurrent neural networks, are fast and lightweight but often struggle to generalize to unseen data. In contrast, recent Transformer-based approaches leverage large-scale pretraining for strong generalization performance, but typically have much larger computational requirements and are not always suitable for low-resource or real-time settings. To address these shortcomings, we present POSSM, a novel hybrid architecture that combines individual spike tokenization via a cross-attention module with a recurrent state-space model (SSM) backbone to enable (1) fast and causal online prediction on neural activity and (2) efficient generalization to new sessions, individuals, and tasks through multi-dataset pretraining. We evaluate POSSM's decoding performance and inference speed on intracortical decoding of monkey motor tasks, and show that it extends to clinical applications, namely handwriting and speech decoding in human subjects. Notably, we demonstrate that pretraining on monkey motor-cortical recordings improves decoding performance on the human handwriting task, highlighting the exciting potential for cross-species transfer. In all of these tasks, we find that POSSM achieves decoding accuracy comparable to state-of-the-art Transformers, at a fraction of the inference cost (up to 9x faster on GPU). These results suggest that hybrid SSMs are a promising approach to bridging the gap between accuracy, inference speed, and generalization when training neural decoders for real-time, closed-loop applications.
Avery Hee-Woon Ryoo, Nanda H. Krishna, Ximeng Mao, Mehdi Azabou, Eva L. Dyer, Matthew G. Perich, Guillaume Lajoie
NeurIPS6
2023 A Unified, Scalable Framework for Neural Population Decoding
abstract
Our ability to use deep learning approaches to decipher neural activity would likely benefit from greater scale, in terms of both the model size and the datasets. However, the integration of many neural recordings into one unified model is challenging, as each recording contains the activity of different neurons from different individual animals. In this paper, we introduce a training framework and architecture designed to model the population dynamics of neural activity across diverse, large-scale neural recordings. Our method first tokenizes individual spikes within the dataset to build an efficient representation of neural events that captures the fine temporal structure of neural activity. We then employ cross-attention and a PerceiverIO backbone to further construct a latent tokenization of neural population activities. Utilizing this architecture and training framework, we construct a large-scale multi-session model trained on large datasets from seven nonhuman primates, spanning over 158 different sessions of recording from over 27,373 neural units and over 100 hours of recordings. In a number of different tasks, we demonstrate that our pretrained model can be rapidly adapted to new, unseen sessions with unspecified neuron correspondence, enabling few-shot performance with minimal labels. This work presents a powerful new approach for building deep learning tools to analyze neural data and stakes out a clear path to training at scale for neural decoding models.
Mehdi Azabou, Vinam Arora, Venkataramana Ganesh, Ximeng Mao, Santosh Nachimuthu, Michael Mendelson, Blake A. Richards, Matthew G. Perich, Guillaume Lajoie, Eva L. Dyer
NeurIPS8
2022 Robust alignment of cross-session recordings of neural population activity by behaviour via unsupervised domain adaptation
abstract
Neural population activity relating to behaviour is assumed to be inherently low-dimensional despite the observed high dimensionality of data recorded using multi-electrode arrays. Therefore, predicting behaviour from neural population recordings has been shown to be most effective when using latent variable models. Over time however, the activity of single neurons can drift, and different neurons will be recorded due to movement of implanted neural probes. This means that a decoder trained to predict behaviour on one day performs worse when tested on a different day. On the other hand, evidence suggests that the latent dynamics underlying behaviour may be stable even over months and years. Based on this idea, we introduce a model capable of inferring behaviourally relevant latent dynamics from previously unseen data recorded from the same animal, without any need for decoder recalibration. We show that unsupervised domain adaptation combined with a sequential variational autoencoder, trained on several sessions, can achieve good generalisation to unseen data and correctly predict behaviour where conventional methods fail. Our results further support the hypothesis that behaviour-related neural dynamics are low-dimensional and stable over time, and will enable more effective and flexible use of brain computer interface technologies.
Justin Jude, Matthew G. Perich, Lee E. Miller, Matthias H. Hennig
ICML2
2021 Targeted Neural Dynamical Modeling
abstract
Latent dynamics models have emerged as powerful tools for modeling and interpreting neural population activity. Recently, there has been a focus on incorporating simultaneously measured behaviour into these models to further disentangle sources of neural variability in their latent space. These approaches, however, are limited in their ability to capture the underlying neural dynamics (e.g. linear) and in their ability to relate the learned dynamics back to the observed behaviour (e.g. no time lag). To this end, we introduce Targeted Neural Dynamical Modeling (TNDM), a nonlinear state-space model that jointly models the neural activity and external behavioural variables. TNDM decomposes neural dynamics into behaviourally relevant and behaviourally irrelevant dynamics; the relevant dynamics are used to reconstruct the behaviour through a flexible linear decoder and both sets of dynamics are used to reconstruct the neural activity through a linear decoder with no time lag. We implement TNDM as a sequential variational autoencoder and validate it on simulated recordings and recordings taken from the premotor and motor cortex of a monkey performing a center-out reaching task. We show that TNDM is able to learn low-dimensional latent dynamics that are highly predictive of behaviour without sacrificing its fit to the neural data.
Cole L. Hurwitz, Akash Srivastava, Kai Xu 0016, Justin Jude, Matthew G. Perich, Lee E. Miller, Matthias H. Hennig
NeurIPS5