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Vishnu Shankar

dblp:207/8756 · DBLP profile ↗
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2ranked-venue papers
1as first author
2since 2021 · last 2023
—ORCID · conflict

Domains — the database's venue-derived domains; a paper can count in several

Artificial intelligence and machine learning · 1 · 1 since 2021Applied, interdisciplinary, general and emerging computing · 1 · 1 first-author · 1 since 2021

Expertise — from the expertise taxonomy: the topics of the expert's papers under the CCF categories. A weight counts papers with recency: 1 for a paper about the topic, 0.3 when the topic is its context, halved every five years.

Interdisciplinary, comprehensive, and emerging computing
1 paper
Bioinformatics and computational biology · 100%
Databases, data mining, and information retrieval
1 paper
Data mining · 50% Machine learning and data management · 50%

Topics — the 4 heaviest of 4, each with the papers that count most for it

TopicWeightPapersLastEvidence papers
Bioinformatics and computational biology › proteomics
mass spectrometry data analysis
0.512021
MassExplorer: a computational tool for analyzing desorption electrospray ionization mass spectrometry data · Bioinform. 2021
Bioinformatics and computational biology › metabolomics
metabolite identification
0.512021
MassExplorer: a computational tool for analyzing desorption electrospray ionization mass spectrometry data · Bioinform. 2021
Machine learning and data management › statistical learning
lasso
0.112021
MassExplorer: a computational tool for analyzing desorption electrospray ionization mass spectrometry data · Bioinform. 2021
Data mining
predictive modeling
0.112021
MassExplorer: a computational tool for analyzing desorption electrospray ionization mass spectrometry data · Bioinform. 2021

Methods — techniques the papers use, named apart from their topics

normalization · 1.0lasso regression · 0.5LASSO regression · 0.5
YearPublicationVenuePosition
2023 Internet of things and deep learning enabled healthcare disease diagnosis using biomedical electrocardiogram signals
abstract
Abstract With recent advancements in the internet of things (IoT), wearables, and sensing technologies, the quality of healthcare services gets improved and it caused a shift from conventional clinical‐based healthcare to real‐time monitoring. The sensors are commonly integrated into several medical gadgets to save the bio‐signals produced by the physiological activities of the human body. At the same time, a biomedical electrocardiogram (ECG) signal is employed as a familiar way to examine and diagnose cardiovascular diseases (CVDs), which is rapid and non‐invasive. Since the increasing number of patients degrades the classification performance due to high differences in the ECG signal patterns among several patients, computer‐assisted automated diagnostic tools are essential for ECG signal classification. With this motivation, this paper introduces a new IoT and deep learning (DL) enabled healthcare disease diagnosis (IoTDL‐HDD) model using biomedical ECG signals. The proposed IoTDL‐HDD model aims to detect the presence of CVDs by the use of DL models in biomedical ECG signals. In addition, the proposed IoTDL‐HDD model utilizes a BiLSTM feature extraction technique to extract useful feature vectors from the ECG signals. For improving the efficiency of the BiLSTM technique, the artificial flora optimization (AFO) algorithm is employed as a hyperparameter optimizer. Besides, a fuzzy deep neural network (FDNN) classifier is employed for assigning proper class labels to the ECG signals. The performance of the IoTDL‐HDD model is examined on biomedical ECG signals and the outcomes are inspected in distinct features. The resultant experimental outcomes pointed out the supremacy of the IoTDL‐HDD model with the maximum accuracy of 93.452%.
Ashish Khanna, Pandiaraj Selvaraj, Deepak Gupta 0002, Tariq Hussain Sheikh, Piyush Kumar Pareek, Vishnu Shankar
Expert Syst. J. Knowl. Eng.6
2021 MassExplorer: a computational tool for analyzing desorption electrospray ionization mass spectrometry data
abstract
Summary: In the last few years, desorption electrospray ionization mass spectrometry imaging (DESI-MSI) has been increasingly used for simultaneous detection of thousands of metabolites and lipids from human tissues and biofluids. To successfully find the most significant differences between two sets of DESI-MSI data (e.g., healthy vs disease) requires the application of accurate computational and statistical methods that can pre-process the data under various normalization settings and help identify these changes among thousands of detected metabolites. Here, we report MassExplorer, a novel computational tool, to help pre-process DESI-MSI data, visualize raw data, build predictive models using the statistical lasso approach to select for a sparse set of significant molecular changes, and interpret selected metabolites. This tool, which is available for both online and offline use, is flexible for both chemists and biologists and statisticians as it helps in visualizing structure of DESI-MSI data and in analyzing the statistically significant metabolites that are differentially expressed across both sample types. Based on the modules in MassExplorer, we expect it to be immediately useful for various biological and chemical applications in mass spectrometry. Availability and implementation: MassExplorer is available as an online R-Shiny application or Mac OS X compatible standalone application. The application, sample performance, source code and corresponding guide can be found at: https://zarelab.com/research/massexplorer-a-tool-to-help-guide-analysis-of-mass-spectrometry-samples/. Supplementary informationMATION: Supplementary data are available at Bioinformatics online.
Vishnu Shankar, Robert Tibshirani, Richard N. Zare
Bioinform.1