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Alex Fout

dblp:209/4908 · DBLP profile ↗
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1ranked-venue papers
1as first author
0since 2021 · last 2017
—ORCID · none

Domains — the database's venue-derived domains; a paper can count in several

Artificial intelligence and machine learning · 1 · 1 first-author

Expertise — from the expertise taxonomy: the topics of the expert's papers under the CCF categories. A weight counts papers with recency: 1 for a paper about the topic, 0.3 when the topic is its context, halved every five years.

Artificial intelligence
1 paper
Graph learning · 100%
Interdisciplinary, comprehensive, and emerging computing
1 paper
Bioinformatics and computational biology · 100%

Topics — the 4 heaviest of 4, each with the papers that count most for it

TopicWeightPapersLastEvidence papers
Machine learning › Graph learning › graph neural network
graph convolutional network
0.312017
Protein Interface Prediction using Graph Convolutional Networks · NIPS 2017
Machine learning › Graph learning › graph neural network › graph convolution
spatial graph convolution
0.312017
Protein Interface Prediction using Graph Convolutional Networks · NIPS 2017
Bioinformatics and computational biology › protein-protein interaction prediction
protein interface prediction
0.312017
Protein Interface Prediction using Graph Convolutional Networks · NIPS 2017
Bioinformatics and computational biology › structural bioinformatics
protein structure
0.312017
Protein Interface Prediction using Graph Convolutional Networks · NIPS 2017

Methods — techniques the papers use, named apart from their topics

graph convolutional network · 0.6SVM · 0.6
YearPublicationVenuePosition
2017 Protein Interface Prediction using Graph Convolutional Networks
abstract
We consider the prediction of interfaces between proteins, a challenging problem with important applications in drug discovery and design, and examine the performance of existing and newly proposed spatial graph convolution operators for this task. By performing convolution over a local neighborhood of a node of interest, we are able to stack multiple layers of convolution and learn effective latent representations that integrate information across the graph that represent the three dimensional structure of a protein of interest. An architecture that combines the learned features across pairs of proteins is then used to classify pairs of amino acid residues as part of an interface or not. In our experiments, several graph convolution operators yielded accuracy that is better than the state-of-the-art SVM method in this task.
Alex Fout, Jonathon Byrd, Basir Shariat, Asa Ben-Hur
NIPS1