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Seon Young Kim

dblp:209/7850 · DBLP profile ↗
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3ranked-venue papers
0as first author
1since 2021 · last 2021
0000-0001-6902-3647ORCID · corroborated

Domains — the database's venue-derived domains; a paper can count in several

Systems, architecture and hardware · 2 · 1 since 2021Applied, interdisciplinary, general and emerging computing · 2

Expertise — from the expertise taxonomy: the topics of the expert's papers under the CCF categories. A weight counts papers with recency: 1 for a paper about the topic, 0.3 when the topic is its context, halved every five years.

Interdisciplinary, comprehensive, and emerging computing
1 paper
Bioinformatics and computational biology · 100%

Topics — the 1 heaviest of 2, each with the papers that count most for it

TopicWeightPapersLastEvidence papers
Bioinformatics and computational biology › functional genomics
CRISPR screening
0.312017
CRISPRcloud: a secure cloud-based pipeline for CRISPR pooled screen deconvolution · Bioinform. 2017

Methods — techniques the papers use, named apart from their topics

next-generation sequencing analysis · 0.3clustering · 0.3
YearPublicationVenuePosition
2021 Thermal-aware adaptive VM allocation considering server locations in heterogeneous data centers
Younggeun Kim 0001, Seon Young Kim, Seung Hun Choi, Sung Woo Chung
J. Syst. Archit.2
2019 Temperature-aware Adaptive VM Allocation in Heterogeneous Data Centers
abstract
Virtualized data centers usually consist of heterogeneous servers which have different specifications (performance). Though there are usually a number of unused servers with different performance in such heterogeneous data centers, conventional DVFS (Dynamic Voltage and Frequency Scaling)-based DTM (Dynamic Thermal Management) techniques do not exploit the unused servers to cool down hot servers. In this paper, we propose a novel DTM technique which adaptively exploits external computing resources (unused servers with different performance) as well as internal computing resources (unused CPU cores in the server) available in heterogeneous data centers. When the temperature of a CPU core in a server exceeds a pre-defined thermal threshold, our proposed technique first identifies memory intensiveness and usage of VMs (Virtual Machines). Depending on the memory intensiveness and usage of VMs, our technique adaptively employs the following three methods: 1) a method that migrates a VM to another server with different performance, 2) a method that migrates VMs among CPU cores in the server, and 3) a DVFS-based method. In our experiments, our proposed technique improves performance by 9.6% and saves system-wide EDP by 12.9%, on average (by up to 17.1% and 24.5%, respectively), compared to a conventional DVFS-based DTM technique, satisfying thermal constraints.
Younggeun Kim 0001, Jeong In Kim, Seung Hun Choi, Seon Young Kim, Sung Woo Chung
ISLPED4
2017 CRISPRcloud: a secure cloud-based pipeline for CRISPR pooled screen deconvolution
abstract
SUMMARY: We present a user-friendly, cloud-based, data analysis pipeline for the deconvolution of pooled screening data. This tool, CRISPRcloud, serves a dual purpose of extracting, clustering and analyzing raw next generation sequencing files derived from pooled screening experiments while at the same time presenting them in a user-friendly way on a secure web-based platform. Moreover, CRISPRcloud serves as a useful web-based analysis pipeline for reanalysis of pooled CRISPR screening datasets. Taken together, the framework described in this study is expected to accelerate development of web-based bioinformatics tool for handling all studies which include next generation sequencing data. AVAILABILITY AND IMPLEMENTATION: http://crispr.nrihub.org. CONTACT: [email protected]. SUPPLEMENTARY INFORMATION: Supplementary data are available at Bioinformatics online.
Hyun-hwan Jeong, Seon Young Kim, Maxime W. C. Rousseaux, Huda Y. Zoghbi, Zhandong Liu
Bioinform.2