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Cyril Firmo

dblp:209/7925 · DBLP profile ↗
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1ranked-venue papers
0as first author
0since 2021 · last 2017
—ORCID · none

Domains — the database's venue-derived domains; a paper can count in several

Applied, interdisciplinary, general and emerging computing · 1

Expertise — from the expertise taxonomy: the topics of the expert's papers under the CCF categories. A weight counts papers with recency: 1 for a paper about the topic, 0.3 when the topic is its context, halved every five years.

Interdisciplinary, comprehensive, and emerging computing
1 paper
Bioinformatics and computational biology · 100%

Topics — the 2 heaviest of 2, each with the papers that count most for it

TopicWeightPapersLastEvidence papers
Bioinformatics and computational biology › sequence analysis
sequencing data processing		 0.312017
Aozan: an automated post-sequencing data-processing pipeline · Bioinform. 2017
Bioinformatics and computational biology › sequence analysis › sequencing data processing
sequencing quality control		 0.112017
Aozan: an automated post-sequencing data-processing pipeline · Bioinform. 2017
YearPublicationVenuePosition
2017 Aozan: an automated post-sequencing data-processing pipeline
abstract
MOTIVATION: Data management and quality control of output from Illumina sequencers is a disk space- and time-consuming task. Thus, we developed Aozan to automatically handle data transfer, demultiplexing, conversion and quality control once a run has finished. This software greatly improves run data management and the monitoring of run statistics via automatic emails and HTML web reports. AVAILABILITY AND IMPLEMENTATION: Aozan is implemented in Java and Python, supported on Linux systems, and distributed under the GPLv3 License at: http://www.outils.genomique.biologie.ens.fr/aozan/ . Aozan source code is available on GitHub: https://github.com/GenomicParisCentre/aozan . CONTACT: [email protected].
Sandrine Perrin, Cyril Firmo, Sophie Lemoine, Stéphane Le Crom, Laurent Jourdren
 Bioinform.2