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Matthias Monfort

dblp:209/8109 · DBLP profile ↗
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1ranked-venue papers
1as first author
0since 2021 · last 2017
—ORCID · none

Domains — the database's venue-derived domains; a paper can count in several

Applied, interdisciplinary, general and emerging computing · 1 · 1 first-author

Expertise — from the expertise taxonomy: the topics of the expert's papers under the CCF categories. A weight counts papers with recency: 1 for a paper about the topic, 0.3 when the topic is its context, halved every five years.

Interdisciplinary, comprehensive, and emerging computing
1 paper
Bioinformatics and computational biology · 100%

Topics — the 2 heaviest of 2, each with the papers that count most for it

TopicWeightPapersLastEvidence papers
Bioinformatics and computational biology › genomics › genome visualization
genome browser visualization
0.312017
Dynamix: dynamic visualization by automatic selection of informative tracks from hundreds of genomic datasets · Bioinform. 2017
Bioinformatics and computational biology
genomics
0.312017
Dynamix: dynamic visualization by automatic selection of informative tracks from hundreds of genomic datasets · Bioinform. 2017

Methods — techniques the papers use, named apart from their topics

JBrowse plugin · 0.3
YearPublicationVenuePosition
2017 Dynamix: dynamic visualization by automatic selection of informative tracks from hundreds of genomic datasets
abstract
MOTIVATION: Visualization of genomic data is fundamental for gaining insights into genome function. Yet, co-visualization of a large number of datasets remains a challenge in all popular genome browsers and the development of new visualization methods is needed to improve the usability and user experience of genome browsers. RESULTS: We present Dynamix, a JBrowse plugin that enables the parallel inspection of hundreds of genomic datasets. Dynamix takes advantage of a priori knowledge to automatically display data tracks with signal within a genomic region of interest. As the user navigates through the genome, Dynamix automatically updates data tracks and limits all manual operations otherwise needed to adjust the data visible on screen. Dynamix also introduces a new carousel view that optimizes screen utilization by enabling users to independently scroll through groups of tracks. AVAILABILITY AND IMPLEMENTATION: Dynamix is hosted at http://furlonglab.embl.de/Dynamix . CONTACT: [email protected]. SUPPLEMENTARY INFORMATION: Supplementary data are available at Bioinformatics online.
Matthias Monfort, Eileen E. M. Furlong, Charles Girardot
Bioinform.1