EDBT 2026 Demo / reviewers in the wild / expert
Ying-Chih Lo
dblp:212/1997
· DBLP profile ↗
9ranked-venue papers
3as first author
6since 2021 · last 2025
0000-0001-6538-842XORCID · corroborated
Domains — the database's venue-derived domains; a paper can count in several
Applied, interdisciplinary, general and emerging computing · 8 · 2 first-author · 6 since 2021Artificial intelligence and machine learning · 1 · 1 first-author
| Year | Publication | Venue | Position |
|---|---|---|---|
| 2025 | Building an allergy reconciliation module to eliminate allergy discrepancies in electronic health recordsabstractOBJECTIVE: Accurate, complete allergy histories are critical for decision-making and medication prescription. However, allergy information is often spread across the electronic health record (EHR); thus, allergy lists are often inaccurate or incomplete. Discrepant allergy information can lead to suboptimal or unsafe clinical care and contribute to alert fatigue. We developed an allergy reconciliation module within Mass General Brigham (MGB)'s EHR to support accurate and intuitive reconciliation of discrepancies in the allergy list, thereby enhancing patient safety. MATERIALS AND METHODS: We combined data-driven methods and knowledge from domain experts to develop 5 mechanisms to compare allergy information across the EHR and designed a user interface to display discrepancies and suggested reconciliation actions, with links to relevant data sources. Qualitative and quantitative analyses were conducted to assess the module's performance and measure user acceptance. RESULTS: We implemented and tested the proposed allergy reconciliation mechanisms and module. A comprehensive integration workflow was developed for the module, which was piloted among 111 primary care physicians at MGB. F1 scores of the reconciliation mechanisms range from 0.86 to 1.0. Qualitative analysis showed majority positive feedback from pilot users. DISCUSSION: Our allergy reconciliation module achieved high performance, and physicians who used it largely accepted its recommendations. However, 56% of the pilot group ultimately did not use the module. User engagement and education are likely needed to increase adoption. CONCLUSION: We built a module to automatically identify discrepancies within patients' allergy records and remind providers to reconcile and update the allergy list. Its high accuracy shows promise for enhancing patient safety and utility of drug allergy alerts. Suzanne V. Blackley, Ying-Chih Lo, Sheril Varghese, Frank Y. Chang, Oliver D. James, Diane L. Seger, Kimberly G. Blumenthal, Foster R. Goss, Li Zhou 0007 |
J. Am. Medical Informatics Assoc. | 2 |
| 2022 | Reconciling Allergy Information for Medication Challenge Test Using Natural Language Processing
Ying-Chih Lo, Sheril Varghese, Suzanne V. Blackley, Frank Y. Chang, Oliver D. James, Kimberly G. Blumenthal, Foster R. Goss, Li Zhou 0007 |
AMIA | 1 |
| 2022 | PASCLex: A comprehensive post-acute sequelae of COVID-19 (PASC) symptom lexicon derived from electronic health record clinical notes
Dinah Foer, Erin MacPhaul, Ying-Chih Lo, David W. Bates, Li Zhou 0007 |
J. Biomed. Informatics | 4 |
| 2021 | Development of a Drug Allergy Alert Tiering Algorithm for Penicillins and Cephalosporins
Heba Edrees, Diane L. Seger, Ying-Chih Lo, David W. Bates, Li Zhou 0007 |
AMIA | 3 |
| 2021 | Development of a Post-Acute Sequelae of COVID-19 (PASC) Symptom Lexicon Using Electronic Health Record Clinical Notes
Dinah Foer, Erin MacPhaul, Ying-Chih Lo, David W. Bates, Li Zhou 0007 |
AMIA | 4 |
| 2021 | Comparison of Machine Learning Algorithms for Earlier Detection of Cognitive Decline from Clinical Notes in the Electronic Health Records
John Laurentiev, Jie Yang 0039, Ying-Chih Lo, Rebecca Amariglio, Gad A. Marshall, Li Zhou 0007 |
AMIA | 4 |
| 2020 | Study of the Temporal Impact of Renal Transplantation on End Stage Renal Disease Using Clinical Notes with a Data-Driven Approach
Ying-Chih Lo, DJoshua R. Lakin, Li Zhou 0007 |
AMIA | 1 |
| 2020 | A dynamic reaction picklist for improving allergy reaction documentation in the electronic health recordabstractOBJECTIVE: Incomplete and static reaction picklists in the allergy module led to free-text and missing entries that inhibit the clinical decision support intended to prevent adverse drug reactions. We developed a novel, data-driven, "dynamic" reaction picklist to improve allergy documentation in the electronic health record (EHR). MATERIALS AND METHODS: We split 3 decades of allergy entries in the EHR of a large Massachusetts healthcare system into development and validation datasets. We consolidated duplicate allergens and those with the same ingredients or allergen groups. We created a reaction value set via expert review of a previously developed value set and then applied natural language processing to reconcile reactions from structured and free-text entries. Three association rule-mining measures were used to develop a comprehensive reaction picklist dynamically ranked by allergen. The dynamic picklist was assessed using recall at top k suggested reactions, comparing performance to the static picklist. RESULTS: The modified reaction value set contained 490 reaction concepts. Among 4 234 327 allergy entries collected, 7463 unique consolidated allergens and 469 unique reactions were identified. Of the 3 dynamic reaction picklists developed, the 1 with the optimal ranking achieved recalls of 0.632, 0.763, and 0.822 at the top 5, 10, and 15, respectively, significantly outperforming the static reaction picklist ranked by reaction frequency. CONCLUSION: The dynamic reaction picklist developed using EHR data and a statistical measure was superior to the static picklist and suggested proper reactions for allergy documentation. Further studies might evaluate the usability and impact on allergy documentation in the EHR. Suzanne V. Blackley, Kimberly G. Blumenthal, Sharmitha Yerneni, Foster R. Goss, Ying-Chih Lo, Sonam N. Shah, Carlos A. Ortega, Zfania Tom Korach, Diane L. Seger, Li Zhou 0007 |
J. Am. Medical Informatics Assoc. | 6 |
| 2018 | Glomerulus Detection on Light Microscopic Images of Renal Pathology with the Faster R-CNN
Ying-Chih Lo, Chia-Feng Juang, I-Fang Chung, Shin-Ning Guo, Man-Ling Huang, Mei-Chin Wen, Cheng-Jian Lin, Hsueh-Yi Lin |
ICONIP (7) | 1 |