Shangqi Gao

dblp:216/2521 · DBLP profile ↗
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14ranked-venue papers
7as first author
12since 2021 · last 2026
0000-0003-4567-1636ORCID · verified

Domains — the database's venue-derived domains; a paper can count in several

Applied, interdisciplinary, general and emerging computing · 8 · 3 first-author · 8 since 2021Graphics, computer vision, multimedia, augmented reality and games · 6 · 2 first-author · 6 since 2021Artificial intelligence and machine learning · 5 · 4 first-author · 3 since 2021
YearPublicationVenuePosition
2026 InDeed: Interpretable Image Deep Decomposition With Grounded Generalizability
abstract
Image decomposition aims to analyze an image into elementary components, which is essential for numerous downstream tasks and also by nature provides certain interpretability to the analysis. Deep learning can be powerful for such tasks, but surprisingly their combination with a focus on interpretability and generalizability is rarely explored. In this work, we introduce a novel framework to decompose an image into the low-rank, sparse, and noise components, combining hierarchical Bayesian modeling and deep learning to create an architecture-modularized and model-generalizable neural network (DNN). The proposed framework includes three steps: (1) hierarchical Bayesian modeling of image decomposition, (2) transforming the inference problem into optimization tasks, and (3) deep inference via a modularized Bayesian DNN under a relaxed amortized formulation. We further analyze the connection between the loss function and the generalization error bound following the PAC-Bayes theory, which then motivates a new test-time adaptation approach for out-of-distribution scenarios. We instantiated the application using two downstream tasks, i.e., image denoising and unsupervised anomaly detection, and the results demonstrated improved generalizability as well as interpretability of our methods. The source code is available at https://github.com/LucyyyyW/InDeed.
Shangqi Gao, Fuping Wu, Xiahai Zhuang
IEEE Trans. Image Process.2
2025 Probabilistic Integration of Renal Cancer Radiology and Pathology Using Graph Neural Networks
Shangqi Gao, Shangde Gao, Inês Machado, Mireia Crispin-Ortuzar
MICCAI (12)1
2025 Learning Concept-Driven Logical Rules for Interpretable and Generalizable Medical Image Classification
Yibo Gao, Hangqi Zhou, Zheyao Gao, Bomin Wang, Shangqi Gao, Xiahai Zhuang
MICCAI (1)5
2025 Multi-modal MRI Translation via Evidential Regression and Distribution Calibration
Jiyao Liu, Shangqi Gao, Zhaohu Xing, Junzhi Ning, Yanzhou Su, Xiao-Yong Zhang, Junjun He, Ningsheng Xu, Xiahai Zhuang
MICCAI (8)2
2025 BayeSMM: Robust Deep Combined Computing Tackling Heavy-Tailed Distribution in Medical Images
Yuanye Liu, Ruoxuan Zhen, Shangqi Gao, Xinzhe Luo, Qingchao Chen, Xiahai Zhuang
MICCAI (13)3
2025 Towards Generalizable Retina Vessel Segmentation with Deformable Graph Priors
abstract
Retinal vessel segmentation is critical for medical diagnosis, yet existing models often struggle to generalize across domains due to appearance variability, limited annotations, and complex vascular morphology. We propose GraphSeg, a variational Bayesian framework that integrates anatomical graph priors with structure-aware image decomposition to enhance cross-domain segmentation. GraphSeg factorizes retinal images into structure-preserved and structure-degraded components, enabling domain-invariant representation. A deformable graph prior, derived from a statistical retinal atlas, is incorporated via a differentiable alignment and guided by an unsupervised energy function. Experiments on three public benchmarks (CHASE, DRIVE, HRF) show that GraphSeg consistently outperforms existing methods under domain shifts. These results highlight the importance of jointly modeling anatomical topology and image structure for robust generalizable vessel segmentation.
Ke Liu 0012, Shangde Gao, Yichao Fu, Shangqi Gao
NeurIPS4
2025 Multi-Center Fetal Brain Tissue Annotation (FeTA) Challenge 2022 Results
abstract
Segmentation is a critical step in analyzing the developing human fetal brain. There have been vast improvements in automatic segmentation methods in the past several years, and the Fetal Brain Tissue Annotation (FeTA) Challenge 2021 helped to establish an excellent standard of fetal brain segmentation. However, FeTA 2021 was a single center study, limiting real-world clinical applicability and acceptance. The multi-center FeTA Challenge 2022 focused on advancing the generalizability of fetal brain segmentation algorithms for magnetic resonance imaging (MRI). In FeTA 2022, the training dataset contained images and corresponding manually annotated multi-class labels from two imaging centers, and the testing data contained images from these two centers as well as two additional unseen centers. The multi-center data included different MR scanners, imaging parameters, and fetal brain super-resolution algorithms applied. 16 teams participated and 17 algorithms were evaluated. Here, the challenge results are presented, focusing on the generalizability of the submissions. Both in- and out-of-domain, the white matter and ventricles were segmented with the highest accuracy (Top Dice scores: 0.89, 0.87 respectively), while the most challenging structure remains the grey matter (Top Dice score: 0.75) due to anatomical complexity. The top 5 average Dices scores ranged from 0.81-0.82, the top 5 average percentile Hausdorff distance values ranged from 2.3-2.5mm, and the top 5 volumetric similarity scores ranged from 0.90-0.92. The FeTA Challenge 2022 was able to successfully evaluate and advance generalizability of multi-class fetal brain tissue segmentation algorithms for MRI and it continues to benchmark new algorithms.
Kelly Payette, Céline Steger, Roxane Licandro, Priscille de Dumast, Hongwei Li 0004, Matthew J. Barkovich, Liu Li 0001, Maik Dannecker, Chen Chen 0042, Cheng Ouyang, Niccolò McConnell, Alina Dana Miron, Yongmin Li 0001, Alena Uus, Irina Grigorescu, Paula Ramirez Gilliland, Md Mahfuzur Rahman Siddiquee, Daguang Xu, Andriy Myronenko, Haoyu Wang 0010, Ziyan Huang, Jin Ye 0002, Mireia Alenyà, Valentin Comte, Oscar Camara 0001, Jean-Baptiste Masson, Astrid Nilsson, Charlotte Godard, Moona Mazher, Abdul Qayyum 0002, Yibo Gao, Hangqi Zhou, Shangqi Gao, Guiming Dong, Guotai Wang, ZunHyan Rieu, HyeonSik Yang, Szymon Plotka, Michal K. Grzeszczyk, Arkadiusz Sitek, Luisa Vargas Daza, Santiago Usma, Pablo Andrés Arbeláez, Wenying Lu, Romain Valabrègue, Anand A. Joshi, Krishna N. Nayak, Richard M. Leahy, Luca Wilhelmi, Aline Dändliker, Antonio G. Gennari, Anton Jakovcic, Melita Klaic, Ana Adzic, Pavel Markovic, Gracia Grabaric, Gregor Kasprian, Gregor Dovjak, Milan Rados, Lana Vasung, Meritxell Bach Cuadra, András Jakab
IEEE Trans. Medical Imaging33
2023 BayeSeg: Bayesian modeling for medical image segmentation with interpretable generalizability
Shangqi Gao, Hangqi Zhou, Yibo Gao, Xiahai Zhuang
Medical Image Anal.1
2023 Multi-target landmark detection with incomplete images via reinforcement learning and shape prior embedding
abstract
Medical images are generally acquired with limited field-of-view (FOV), which could lead to incomplete regions of interest (ROI), and thus impose a great challenge on medical image analysis. This is particularly evident for the learning-based multi-target landmark detection, where algorithms could be misleading to learn primarily the variation of background due to the varying FOV, failing the detection of targets. Based on learning a navigation policy, instead of predicting targets directly, reinforcement learning (RL)-based methods have the potential to tackle this challenge in an efficient manner. Inspired by this, in this work we propose a multi-agent RL framework for simultaneous multi-target landmark detection. This framework is aimed to learn from incomplete or (and) complete images to form an implicit knowledge of global structure, which is consolidated during the training stage for the detection of targets from either complete or incomplete test images. To further explicitly exploit the global structural information from incomplete images, we propose to embed a shape model into the RL process. With this prior knowledge, the proposed RL model can not only localize dozens of targets simultaneously, but also work effectively and robustly in the presence of incomplete images. We validated the applicability and efficacy of the proposed method on various multi-target detection tasks with incomplete images from practical clinics, using body dual-energy X-ray absorptiometry (DXA), cardiac MRI and head CT datasets. Results showed that our method could predict whole set of landmarks with incomplete training images up to 80% missing proportion (average distance error 2.29 cm on body DXA), and could detect unseen landmarks in regions with missing image information outside FOV of target images (average distance error 6.84 mm on 3D half-head CT). Our code will be released via https://zmiclab.github.io/projects.html.
Kaiwen Wan, Lei Li 0020, Dengqiang Jia, Shangqi Gao, Yingzhi Wu, Huandong Lin, Xiongzheng Mu, Fuping Wu, Xiahai Zhuang
Medical Image Anal.4
2023 Bayesian Image Super-Resolution With Deep Modeling of Image Statistics
abstract
Modeling statistics of image priors is useful for image super-resolution, but little attention has been paid from the massive works of deep learning-based methods. In this work, we propose a Bayesian image restoration framework, where natural image statistics are modeled with the combination of smoothness and sparsity priors. Concretely, first we consider an ideal image as the sum of a smoothness component and a sparsity residual, and model real image degradation including blurring, downscaling, and noise corruption. Then, we develop a variational Bayesian approach to infer their posteriors. Finally, we implement the variational approach for single image super-resolution (SISR) using deep neural networks, and propose an unsupervised training strategy. The experiments on three image restoration tasks, i.e., ideal SISR, realistic SISR, and real-world SISR, demonstrate that our method has superior model generalizability against varying noise levels and degradation kernels and is effective in unsupervised SISR. The code and resulting models are released via https://zmiclab.github.io/projects.html.
Shangqi Gao, Xiahai Zhuang
IEEE Trans. Pattern Anal. Mach. Intell.1
2022 Joint Modeling of Image and Label Statistics for Enhancing Model Generalizability of Medical Image Segmentation
Shangqi Gao, Hangqi Zhou, Yibo Gao, Xiahai Zhuang
MICCAI (5)1
2022 Rank-One Network: An Effective Framework for Image Restoration
abstract
The principal rank-one (RO) components of an image represent the self-similarity of the image, which is an important property for image restoration. However, the RO components of a corrupted image could be decimated by the procedure of image denoising. We suggest that the RO property should be utilized and the decimation should be avoided in image restoration. To achieve this, we propose a new framework comprised of two modules, i.e., the RO decomposition and RO reconstruction. The RO decomposition is developed to decompose a corrupted image into the RO components and residual. This is achieved by successively applying RO projections to the image or its residuals to extract the RO components. The RO projections, based on neural networks, extract the closest RO component of an image. The RO reconstruction is aimed to reconstruct the important information, respectively from the RO components and residual, as well as to restore the image from this reconstructed information. Experimental results on four tasks, i.e., noise-free image super-resolution (SR), realistic image SR, gray-scale image denoising, and color image denoising, show that the method is effective and efficient for image restoration, and it delivers superior performance for realistic image SR and color image denoising. Our source code is available online.
Shangqi Gao, Xiahai Zhuang
IEEE Trans. Pattern Anal. Mach. Intell.1
2020 Robust approximations of low-rank minimization for tensor completion
Shangqi Gao, Xiahai Zhuang
Neurocomputing1
2019 Robust balancing scheme-based approach for tensor completion
Shangqi Gao, Qibin Fan
Neurocomputing1