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Antti Lauerma

dblp:221/7239 · DBLP profile ↗
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1ranked-venue papers
0as first author
0since 2021 · last 2018
0000-0002-5078-3547ORCID · reported

Domains — the database's venue-derived domains; a paper can count in several

Applied, interdisciplinary, general and emerging computing · 1

Expertise — from the expertise taxonomy: the topics of the expert's papers under the CCF categories. A weight counts papers with recency: 1 for a paper about the topic, 0.3 when the topic is its context, halved every five years.

Interdisciplinary, comprehensive, and emerging computing
1 paper
Bioinformatics and computational biology · 100%

Topics — the 2 heaviest of 3, each with the papers that count most for it

TopicWeightPapersLastEvidence papers
Bioinformatics and computational biology
gene expression analysis
0.312018
INfORM: Inference of NetwOrk Response Modules · Bioinform. 2018
Bioinformatics and computational biology › network bioinformatics › biological network analysis › biological network inference
gene network inference
0.312018
INfORM: Inference of NetwOrk Response Modules · Bioinform. 2018

Methods — techniques the papers use, named apart from their topics

network inference algorithms · 0.3k-means clustering · 0.3
YearPublicationVenuePosition
2018 INfORM: Inference of NetwOrk Response Modules
abstract
Summary: Detecting and interpreting responsive modules from gene expression data by using network-based approaches is a common but laborious task. It often requires the application of several computational methods implemented in different software packages, forcing biologists to compile complex analytical pipelines. Here we introduce INfORM (Inference of NetwOrk Response Modules), an R shiny application that enables non-expert users to detect, evaluate and select gene modules with high statistical and biological significance. INfORM is a comprehensive tool for the identification of biologically meaningful response modules from consensus gene networks inferred by using multiple algorithms. It is accessible through an intuitive graphical user interface allowing for a level of abstraction from the computational steps. Availability and implementation: INfORM is freely available for academic use at https://github.com/Greco-Lab/INfORM. Supplementary information: Supplementary data are available at Bioinformatics online.
Veer Singh Marwah, Pia Anneli Sofia Kinaret, Angela Serra, Giovanni Scala, Antti Lauerma, Vittorio Fortino, Dario Greco
Bioinform.5