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Shian-Lei Ho

dblp:228/5347 · DBLP profile ↗
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1ranked-venue papers
0as first author
0since 2021 · last 2018
—ORCID · none

Domains — the database's venue-derived domains; a paper can count in several

Applied, interdisciplinary, general and emerging computing · 1

Expertise — from the expertise taxonomy: the topics of the expert's papers under the CCF categories. A weight counts papers with recency: 1 for a paper about the topic, 0.3 when the topic is its context, halved every five years.

Interdisciplinary, comprehensive, and emerging computing
1 paper
Bioinformatics and computational biology · 100%

Topics — the 3 heaviest of 3, each with the papers that count most for it

TopicWeightPapersLastEvidence papers
Bioinformatics and computational biology
sequence analysis		 0.312018
MIDORI server: a webserver for taxonomic assignment of unknown metazoan mitochondrial-encoded sequences using a curated database · Bioinform. 2018
Bioinformatics and computational biology › metagenomics
taxonomic classification		 0.312018
MIDORI server: a webserver for taxonomic assignment of unknown metazoan mitochondrial-encoded sequences using a curated database · Bioinform. 2018
Bioinformatics and computational biology
database and knowledge base		 0.112018
MIDORI server: a webserver for taxonomic assignment of unknown metazoan mitochondrial-encoded sequences using a curated database · Bioinform. 2018

Methods — techniques the papers use, named apart from their topics

SPINGO · 0.3SINTAX · 0.3RDP Classifier · 0.3
YearPublicationVenuePosition
2018 MIDORI server: a webserver for taxonomic assignment of unknown metazoan mitochondrial-encoded sequences using a curated database
abstract
Summary: We present MIDORI server, a user-friendly web platform that uses a curated reference dataset, MIDORI, for high throughput taxonomic classification of unknown metazoan mitochondrial-encoded gene sequences. Currently three methods of taxonomic assignments: RDP Classifier, SPINGO and SINTAX, are implemented. Availability and implementation: The web server is freely available at {http://reference-midori.info/server.php}.
Matthieu Leray, Shian-Lei Ho, I-Jeng Lin, Ryuji J. Machida
 Bioinform.2